We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
3366 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 68 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
TCHHL1
ENSSSCG00000006609
ENSG00000182898
Trichohyalin like 1
Tissue enhanced
Detected in some
epididymis:
6.6
male glands:
10.5
mouth:
8.4
skin:
13.3
TCIM
ENSSSCG00000032320
ENSG00000176907
Transcriptional and immune response regulator
Tissue enhanced
Detected in many
adipose tissue:
62.0
bone marrow:
73.2
TDG
ENSSSCG00000000847
ENSG00000139372
Thymine DNA glycosylase
Low tissue specificity
Detected in all
TDGF1
ENSSSCG00000023395
ENSG00000241186
Teratocarcinoma-derived growth factor 1
Tissue enhanced
Detected in many
fallopian tube:
23.4
TDRKH
ENSSSCG00000027770
ENSG00000182134
Tudor and KH domain-containing protein
Tissue enhanced
Detected in many
brain:
13.2
retina:
13.4
testis:
39.6
TEAD2
ENSSSCG00000025568
ENSG00000074219
TEA domain transcription factor 2
Low tissue specificity
Detected in all
TECTA
ENSSSCG00000023728
ENSG00000109927
Tectorin alpha
Low tissue specificity
Detected in all
TECTB
ENSSSCG00000010632
ENSG00000119913
Tectorin beta
Group enriched
Detected in some
epididymis:
38.1
liver:
34.8
TET1
ENSSSCG00000010241
ENSG00000138336
Methylcytosine dioxygenase TET1
Low tissue specificity
Detected in all
TEX11
ENSSSCG00000030850
ENSG00000120498
Testis expressed 11
Low tissue specificity
Detected in all
TEX22
ENSSSCG00000036444
ENSG00000226174
Testis expressed 22
Tissue enhanced
Detected in many
testis:
27.0
TEX49
ENSSSCG00000000174
ENSG00000257987
Testis expressed 49
Tissue enriched
Detected in many
testis:
110.2
TEX9
ENSSSCG00000004602
ENSG00000151575
Testis-expressed sequence 9 protein
Tissue enhanced
Detected in all
skeletal muscle:
82.2
TFAP2A
ENSSSCG00000001036
ENSG00000137203
Transcription factor AP-2 alpha
Tissue enhanced
Detected in many
epididymis:
64.5
male glands:
52.5
skin:
56.0
TFAP2B
ENSSSCG00000025535
ENSG00000008196
Transcription factor AP-2-beta
Group enriched
Detected in many
breast:
49.4
epididymis:
82.5
TFCP2L1
ENSSSCG00000015732
ENSG00000115112
Transcription factor CP2 like 1
Tissue enhanced
Detected in many
kidney:
72.4
salivary gland:
96.6
upper respiratory system:
48.5
TFEB
ENSSSCG00000001621
ENSG00000112561
Transcription factor EB
Low tissue specificity
Detected in all
TFF2
ENSSSCG00000024320
ENSG00000160181
Trefoil factor 2
Group enriched
Detected in some
small intestine:
670.0
stomach:
368.3
TFF3
ENSSSCG00000022857
ENSG00000160180
Trefoil factor 3 precursor
Group enriched
Detected in many
male glands:
394.8
upper respiratory system:
123.4
TGFB1I1
ENSSSCG00000035952
ENSG00000140682
Transforming growth factor beta 1 induced transcript 1
Tissue enhanced
Detected in many
cervix:
62.0
smooth muscle:
86.2
TGFB3
ENSSSCG00000002385
ENSG00000119699
Transforming growth factor beta-3 precursor
Tissue enhanced
Detected in many
cartilage:
37.8
penis:
51.2
TGFBR1
ENSSSCG00000005382
ENSG00000106799
TGF-beta receptor type-1 precursor
Low tissue specificity
Detected in all
TGIF2-C20orf24
ENSSSCG00000039201
ENSG00000259399
TGIF2-C20orf24 readthrough
Low tissue specificity
Detected in all
TGM2
ENSSSCG00000023522
ENSG00000198959
Transglutaminase 2
Low tissue specificity
Detected in many
THBD
ENSSSCG00000007115
ENSG00000178726
Thrombomodulin precursor
Tissue enhanced
Detected in many
mesothelial tissue:
74.0
THBS1
ENSSSCG00000004789
ENSG00000137801
Thrombospondin-1 precursor
Tissue enhanced
Detected in many
male glands:
224.8
ovary:
175.2
THBS2
ENSSSCG00000004012
ENSG00000186340
Thrombospondin 2
Tissue enhanced
Detected in many
cornea:
56.1
dura mater:
89.5
THBS4
ENSSSCG00000014117
ENSG00000113296
Thrombospondin 4
Tissue enhanced
Detected in many
bone marrow:
79.3
cornea:
86.9
smooth muscle:
78.7
synovial tissue:
82.6
THEM5
ENSSSCG00000006614
ENSG00000196407
Thioesterase superfamily member 5
Group enriched
Detected in some
cornea:
49.6
epididymis:
13.1
male glands:
27.5
mouth:
27.3
skin:
51.8
THOC7
ENSSSCG00000011491
ENSG00000163634
THO complex 7
Low tissue specificity
Detected in all
THRB
ENSSSCG00000036033
ENSG00000151090
Thyroid hormone receptor beta
Low tissue specificity
Detected in many
THRSP
ENSSSCG00000033822
ENSG00000151365
Thyroid hormone-inducible hepatic protein
Tissue enhanced
Detected in all
adipose tissue:
93.0
aorta:
76.3
bone marrow:
60.3
TIAM1
ENSSSCG00000012034
ENSG00000156299
T cell lymphoma invasion and metastasis 1
Tissue enhanced
Detected in many
brain:
111.2
skin:
29.9
TIAM2
ENSSSCG00000004065
ENSG00000146426
T cell lymphoma invasion and metastasis 2
Tissue enhanced
Detected in many
brain:
33.8
cartilage:
71.5
TIE1
ENSSSCG00000003950
ENSG00000066056
Tyrosine kinase with immunoglobulin like and EGF like domains 1
Low tissue specificity
Detected in all
TIMELESS
ENSSSCG00000000399
ENSG00000111602
Timeless circadian regulator
Tissue enriched
Detected in many
lens:
41.8
TIMM10
ENSSSCG00000039659
ENSG00000134809
Translocase of inner mitochondrial membrane 10
Low tissue specificity
Detected in all
TIMM8A
ENSSSCG00000012494
ENSG00000126953
Translocase of inner mitochondrial membrane 8A
Low tissue specificity
Detected in all
TIMM8B
ENSSSCG00000023599
ENSG00000150779
Translocase of inner mitochondrial membrane 8 homolog B
Tissue enhanced
Detected in all
lens:
48.8
TIMP1
ENSSSCG00000012277
ENSG00000102265
Metalloproteinase inhibitor 1 precursor
Tissue enriched
Detected in many
ovary:
718.4
TIMP3
ENSSSCG00000031866
ENSG00000100234
TIMP metallopeptidase inhibitor 3
Low tissue specificity
Detected in all
TINAGL1
ENSSSCG00000003600
ENSG00000142910
Tubulointerstitial nephritis antigen like 1
Low tissue specificity
Detected in many
TIPARP
ENSSSCG00000027646
ENSG00000163659
TCDD inducible poly(ADP-ribose) polymerase
Low tissue specificity
Detected in all
TLDC1
ENSSSCG00000002672
ENSG00000140950
TBC/LysM-associated domain containing 1
Tissue enhanced
Detected in all
esophagus:
25.5
male glands:
33.4
TLDC2
ENSSSCG00000031690
ENSG00000101342
TBC/LysM-associated domain containing 2
Tissue enhanced
Detected in many
large intestine:
19.1
small intestine:
28.5
TLE1
ENSSSCG00000005291
ENSG00000196781
Transducin like enhancer of split 1
Low tissue specificity
Detected in all
TLE4
ENSSSCG00000005288
ENSG00000106829
Transducin like enhancer of split 4
Low tissue specificity
Detected in all
TLN2
ENSSSCG00000024088
ENSG00000171914
Talin 2
Low tissue specificity
Detected in all
TLR2
ENSSSCG00000009002
ENSG00000137462
Toll-like receptor 2 precursor
Low tissue specificity
Detected in all
TM2D3
ENSSSCG00000005782
ENSG00000184277
TM2 domain containing 3
Low tissue specificity
Detected in all
« prev
| Page
of 68 |
next »
MENU
