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Human disease related genes
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Keyword
Chromosome
1
2
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7
8
9
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
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Lymphoid tissue
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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3366 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
ANKH
ENSSSCG00000016784
ENSG00000154122
ANKH inorganic pyrophosphate transport regulator
Tissue enriched
Detected in many
cartilage:
124.6
ANKMY2
ENSSSCG00000015360
ENSG00000106524
Ankyrin repeat and MYND domain-containing protein 2
Low tissue specificity
Detected in all
ANKRD11
ENSSSCG00000039541
ENSG00000167522
Ankyrin repeat domain 11
Tissue enhanced
Detected in all
stomach:
74.9
ANKRD22
ENSSSCG00000010445
ENSG00000152766
Ankyrin repeat domain 22
Tissue enhanced
Detected in many
large intestine:
33.2
small intestine:
17.6
stomach:
15.9
ANKRD28
ENSSSCG00000011194
ENSG00000206560
Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A
Tissue enhanced
Detected in all
male glands:
55.5
ANKRD33B
ENSSSCG00000039609
ENSG00000164236
Ankyrin repeat domain 33B
Tissue enhanced
Detected in many
skeletal muscle:
39.7
ANKRD44
ENSSSCG00000016074
ENSG00000065413
Ankyrin repeat domain 44
Tissue enhanced
Detected in many
lymphoid tissue:
45.2
ANKRD45
ENSSSCG00000015491
ENSG00000183831
Ankyrin repeat domain 45
Tissue enhanced
Detected in many
choroid plexus:
39.3
testis:
39.8
ANKRD7
ENSSSCG00000016623
ENSG00000106013
Ankyrin repeat domain 7
Tissue enriched
Detected in all
testis:
42.1
ANKS1A
ENSSSCG00000001534
ENSG00000064999
Ankyrin repeat and SAM domain-containing protein 1A
Tissue enriched
Detected in all
kidney:
96.5
ANKS4B
ENSSSCG00000007850
ENSG00000175311
Ankyrin repeat and sterile alpha motif domain containing 4B
Tissue enhanced
Detected in some
large intestine:
27.2
liver:
35.4
male glands:
24.8
small intestine:
28.6
ANKS6
ENSSSCG00000005378
ENSG00000165138
Ankyrin repeat and sterile alpha motif domain containing 6
Low tissue specificity
Detected in many
ANO3
ENSSSCG00000013339
ENSG00000134343
Anoctamin 3
Group enriched
Detected in many
brain:
65.0
ovary:
30.2
ANPEP
ENSSSCG00000001849
ENSG00000166825
Aminopeptidase N
Tissue enhanced
Detected in many
male glands:
57.2
small intestine:
208.3
ANXA4
ENSSSCG00000008336
ENSG00000196975
Annexin A4
Tissue enriched
Detected in many
gallbladder:
149.4
ANXA5
ENSSSCG00000009097
ENSG00000164111
Annexin A5
Low tissue specificity
Detected in all
ANXA6
ENSSSCG00000017089
ENSG00000197043
Annexin A6
Low tissue specificity
Detected in all
AP1S1
ENSSSCG00000021145
ENSG00000106367
Adaptor related protein complex 1 sigma 1 subunit
Tissue enhanced
Detected in all
brain:
56.0
AP1S2
ENSSSCG00000036074
ENSG00000182287
Adaptor related protein complex 1 sigma 2 subunit
Low tissue specificity
Detected in all
AP1S3
ENSSSCG00000040847
ENSG00000152056
Adaptor related protein complex 1 sigma 3 subunit
Tissue enhanced
Detected in many
male glands:
31.5
AP3S1
ENSSSCG00000037595
ENSG00000177879
Adaptor related protein complex 3 sigma 1 subunit
Low tissue specificity
Detected in all
APBB1IP
ENSSSCG00000030156
ENSG00000077420
Amyloid beta precursor protein binding family B member 1 interacting protein
Tissue enriched
Detected in many
lymphoid tissue:
75.5
APCDD1
ENSSSCG00000039797
ENSG00000154856
APC down-regulated 1
Tissue enhanced
Detected in all
epididymis:
55.5
APH1A
ENSSSCG00000028297
ENSG00000117362
Gamma-secretase subunit APH-1A
Low tissue specificity
Detected in all
API5
ENSSSCG00000013285
ENSG00000166181
Apoptosis inhibitor 5
Low tissue specificity
Detected in all
APIP
ENSSSCG00000013299
ENSG00000149089
APAF1 interacting protein
Tissue enhanced
Detected in all
male glands:
73.4
APLP2
ENSSSCG00000015244
ENSG00000084234
Amyloid beta precursor like protein 2
Low tissue specificity
Detected in all
APOD
ENSSSCG00000011831
ENSG00000189058
Apolipoprotein D
Group enriched
Detected in many
brain:
308.3
cornea:
375.9
vagus nerve:
117.2
APOE
ENSSSCG00000003088
ENSG00000130203
Apolipoprotein E precursor
Tissue enriched
Detected in many
liver:
755.1
APPBP2
ENSSSCG00000017678
ENSG00000062725
Amyloid beta precursor protein binding protein 2
Low tissue specificity
Detected in all
APPL2
ENSSSCG00000000841
ENSG00000136044
DCC-interacting protein 13-beta
Low tissue specificity
Detected in all
AQP2
ENSSSCG00000021193
ENSG00000167580
Aquaporin-2
Group enriched
Detected in some
kidney:
212.6
male glands:
103.9
AQP3
ENSSSCG00000040513
ENSG00000165272
Aquaporin-3
Tissue enhanced
Detected in many
kidney:
52.7
mouth:
41.9
upper respiratory system:
73.3
ARAP2
ENSSSCG00000008768
ENSG00000047365
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
Tissue enhanced
Detected in many
brain:
52.1
lymphoid tissue:
46.8
thyroid gland:
49.8
ARAP3
ENSSSCG00000014391
ENSG00000120318
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
Low tissue specificity
Detected in many
ARCN1
ENSSSCG00000030053
ENSG00000095139
Archain 1
Tissue enhanced
Detected in all
male glands:
114.8
AREG
ENSSSCG00000008963
ENSG00000109321
Amphiregulin precursor
Tissue enhanced
Detected in all
ovary:
33.6
ARF4
ENSSSCG00000031791
ENSG00000168374
ADP ribosylation factor 4
Tissue enhanced
Detected in all
male glands:
78.3
ARFGEF3
ENSSSCG00000022968
ENSG00000112379
ARFGEF family member 3
Tissue enhanced
Detected in many
brain:
39.3
salivary gland:
39.4
upper respiratory system:
31.8
ARFIP1
ENSSSCG00000009010
ENSG00000164144
Arfaptin-1
Low tissue specificity
Detected in all
ARHGAP18
ENSSSCG00000004205
ENSG00000146376
Rho GTPase activating protein 18
Tissue enhanced
Detected in all
mesothelial tissue:
56.1
ARHGAP20
ENSSSCG00000015015
ENSG00000137727
Rho GTPase activating protein 20
Tissue enhanced
Detected in many
pineal gland:
41.4
testis:
31.7
ARHGAP22
ENSSSCG00000010381
ENSG00000128805
Rho GTPase activating protein 22
Tissue enhanced
Detected in many
synovial tissue:
28.6
ARHGAP24
ENSSSCG00000009229
ENSG00000138639
Rho GTPase activating protein 24
Tissue enhanced
Detected in all
kidney:
44.3
lens:
48.2
pineal gland:
47.9
ARHGAP28
ENSSSCG00000021612
ENSG00000088756
Rho GTPase activating protein 28
Low tissue specificity
Detected in many
ARHGAP31
ENSSSCG00000026224
ENSG00000031081
Rho GTPase activating protein 31
Low tissue specificity
Detected in many
ARHGEF10L
ENSSSCG00000003486
ENSG00000074964
Rho guanine nucleotide exchange factor 10 like
Low tissue specificity
Detected in all
ARHGEF15
ENSSSCG00000028048
ENSG00000198844
Rho guanine nucleotide exchange factor 15
Low tissue specificity
Detected in many
ARHGEF17
ENSSSCG00000014822
ENSG00000110237
Rho guanine nucleotide exchange factor 17
Low tissue specificity
Detected in all
ARHGEF26
ENSSSCG00000024205
ENSG00000114790
Rho guanine nucleotide exchange factor 26
Tissue enhanced
Detected in all
smooth muscle:
49.9
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