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Human disease related genes
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Keyword
Chromosome
1
2
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6
7
8
9
10
11
12
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
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916 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
RELL2
ENSSSCG00000014389
ENSG00000164620
RELT like 2
Tissue enriched
Detected in some
brain:
34.5
RERG
ENSSSCG00000000602
ENSG00000134533
RAS like estrogen regulated growth inhibitor
Tissue enhanced
Detected in many
adrenal gland:
59.8
cervix:
47.5
RGS4
ENSSSCG00000006335
ENSG00000117152
Regulator of G-protein signaling 4
Group enriched
Detected in many
brain:
76.6
male glands:
55.6
RGS5
ENSSSCG00000037821
ENSG00000143248
Regulator of G-protein signaling 5
Tissue enhanced
Detected in many
cartilage:
142.1
RHBG
ENSSSCG00000035121
ENSG00000132677
Ammonium transporter Rh type B
Tissue enhanced
Detected in all
kidney:
41.8
skin:
21.6
RHCG
ENSSSCG00000001841
ENSG00000140519
Ammonium transporter Rh type C
Tissue enhanced
Detected in many
kidney:
19.8
mouth:
44.9
ovary:
27.8
RHOBTB1
ENSSSCG00000028327
ENSG00000072422
Rho related BTB domain containing 1
Tissue enhanced
Detected in all
kidney:
43.5
male glands:
60.1
RHOBTB2
ENSSSCG00000009638
ENSG00000008853
Rho related BTB domain containing 2
Tissue enhanced
Detected in all
kidney:
56.7
RHPN1
ENSSSCG00000006957
ENSG00000158106
Rhophilin Rho GTPase binding protein 1
Tissue enhanced
Detected in many
fallopian tube:
10.7
kidney:
15.2
small intestine:
11.2
upper respiratory system:
12.1
RNF150
ENSSSCG00000009053
ENSG00000170153
Ring finger protein 150
Tissue enhanced
Detected in many
large intestine:
42.4
RNF152
ENSSSCG00000004902
ENSG00000176641
E3 ubiquitin-protein ligase RNF152
Tissue enhanced
Detected in many
choroid plexus:
60.0
kidney:
102.9
RNF212B
ENSSSCG00000026237
ENSG00000215277
Ring finger protein 212B
Group enriched
Detected in some
brain:
11.6
kidney:
10.0
testis:
10.4
RPL3L
ENSSSCG00000032657
ENSG00000140986
Ribosomal protein L3 like
Tissue enhanced
Detected in some
heart:
48.9
skeletal muscle:
86.5
RRAGD
ENSSSCG00000004318
ENSG00000025039
Ras-related GTP-binding protein D
Tissue enhanced
Detected in many
male glands:
34.4
RSAD2
ENSSSCG00000008648
ENSG00000134321
Radical S-adenosyl methionine domain-containing protein 2
Tissue enhanced
Detected in many
small intestine:
50.0
RUNX3
ENSSSCG00000032686
ENSG00000020633
Runt related transcription factor 3
Tissue enhanced
Detected in many
lymphoid tissue:
35.4
stomach:
35.2
S100A2
ENSSSCG00000006580
ENSG00000196754
S100 calcium binding protein A2
Tissue enhanced
Detected in many
mouth:
105.0
skin:
69.0
S100A4
ENSSSCG00000006578
ENSG00000196154
Protein S100-A4
Tissue enriched
Detected in many
lens:
255.7
S100A6
ENSSSCG00000021084
ENSG00000197956
Protein S100-A6
Tissue enhanced
Detected in many
cornea:
159.7
lens:
261.3
S1PR3
ENSSSCG00000009580
ENSG00000213694
Sphingosine-1-phosphate receptor 3
Tissue enhanced
Detected in many
lens:
30.8
ovary:
50.9
SALL3
ENSSSCG00000004858
ENSG00000256463
Spalt like transcription factor 3
Tissue enhanced
Detected in some
brain:
14.0
heart:
12.0
male glands:
55.2
SARDH
ENSSSCG00000005740
ENSG00000123453
Sarcosine dehydrogenase, mitochondrial
Group enriched
Detected in many
kidney:
47.3
liver:
73.6
SCIN
ENSSSCG00000015353
ENSG00000006747
Adseverin
Tissue enhanced
Detected in many
kidney:
43.1
male glands:
34.2
SCLY
ENSSSCG00000016334
ENSG00000132330
Selenocysteine lyase
Tissue enhanced
Detected in all
liver:
41.0
SCN3B
ENSSSCG00000024299
ENSG00000166257
Sodium voltage-gated channel beta subunit 3
Tissue enriched
Detected in some
brain:
78.9
SCN4B
ENSSSCG00000029199
ENSG00000177098
Sodium voltage-gated channel beta subunit 4
Tissue enhanced
Detected in many
brain:
61.8
skeletal muscle:
37.7
SCP2
ENSSSCG00000027114
ENSG00000174348
Non-specific lipid-transfer protein
Tissue enhanced
Detected in all
liver:
102.2
SCRN2
ENSSSCG00000017521
ENSG00000141295
Secernin 2
Tissue enhanced
Detected in all
kidney:
55.0
SCTR
ENSSSCG00000029536
ENSG00000080293
Secretin receptor precursor
Tissue enhanced
Detected in some
gallbladder:
16.6
kidney:
12.0
small intestine:
14.6
stomach:
18.7
SCUBE1
ENSSSCG00000000029
ENSG00000159307
Signal peptide, CUB domain and EGF like domain containing 1
Tissue enhanced
Detected in many
cervix:
50.6
endometrium:
43.3
SDC1
ENSSSCG00000008601
ENSG00000115884
Syndecan-1 precursor
Tissue enhanced
Detected in many
cornea:
68.8
gallbladder:
85.8
ovary:
105.1
SDSL
ENSSSCG00000009870
ENSG00000139410
Serine dehydratase like
Group enriched
Detected in some
kidney:
30.7
liver:
62.4
SEMA3B
ENSSSCG00000011400
ENSG00000012171
Semaphorin 3B
Tissue enhanced
Detected in many
vagus nerve:
112.4
SEMA3C
ENSSSCG00000023784
ENSG00000075223
Semaphorin 3C
Tissue enhanced
Detected in many
cartilage:
97.2
SEMA3G
ENSSSCG00000011440
ENSG00000010319
Semaphorin 3G
Low tissue specificity
Detected in many
SEMA4A
ENSSSCG00000006495
ENSG00000196189
Semaphorin 4A
Tissue enhanced
Detected in many
lymphoid tissue:
35.6
stomach:
34.4
SEMA5A
ENSSSCG00000017095
ENSG00000112902
Semaphorin 5A
Tissue enhanced
Detected in many
lens:
89.0
SERHL2
ENSSSCG00000034350
ENSG00000183569
Serine hydrolase like 2
Tissue enhanced
Detected in all
kidney:
41.1
pineal gland:
38.9
SERPINA1
ENSSSCG00000002476
ENSG00000197249
Alpha-1-antitrypsin precursor
Tissue enhanced
Detected in many
cartilage:
61.3
gallbladder:
123.2
liver:
272.0
SERPINA3-2
ENSSSCG00000002487
Alpha-1-antichymotrypsin 2 precursor
Tissue enriched
Detected in some
liver:
185.9
SERPINC1
ENSSSCG00000015493
ENSG00000117601
Antithrombin-III precursor
Tissue enriched
Detected in some
liver:
265.5
SFRP1
ENSSSCG00000025822
ENSG00000104332
Secreted frizzled related protein 1
Tissue enhanced
Detected in many
choroid plexus:
166.0
SFTA2
ENSSSCG00000037154
ENSG00000196260
Surfactant associated 2
Tissue enhanced
Detected in some
epididymis:
133.2
stomach:
37.8
SFXN2
ENSSSCG00000010589
ENSG00000156398
Sideroflexin 2
Tissue enhanced
Detected in all
kidney:
28.3
male glands:
35.3
SFXN5
ENSSSCG00000008307
ENSG00000144040
Sideroflexin 5
Tissue enriched
Detected in many
brain:
39.0
SGK2
ENSSSCG00000024325
ENSG00000101049
SGK2, serine/threonine kinase 2
Tissue enhanced
Detected in many
adipose tissue:
85.4
brain:
31.5
kidney:
33.0
SH2D4A
ENSSSCG00000033750
ENSG00000104611
SH2 domain containing 4A
Tissue enhanced
Detected in many
stomach:
28.6
SH3BGRL
ENSSSCG00000012452
ENSG00000131171
SH3 domain binding glutamate rich protein like
Low tissue specificity
Detected in all
SH3GL3
ENSSSCG00000001795
ENSG00000140600
SH3 domain containing GRB2 like 3, endophilin A3
Group enriched
Detected in many
brain:
43.5
testis:
22.4
SH3TC2
ENSSSCG00000023279
ENSG00000169247
SH3 domain and tetratricopeptide repeats 2
Tissue enhanced
Detected in many
brain:
24.0
vagus nerve:
47.3
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