We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
916 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 19 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
PHYHD1
ENSSSCG00000005665
ENSG00000175287
Phytanoyl-CoA dioxygenase domain containing 1
Tissue enhanced
Detected in many
bone marrow:
16.0
kidney:
19.2
liver:
19.9
PHYHIPL
ENSSSCG00000039215
ENSG00000165443
Phytanoyl-CoA hydroxylase-interacting protein-like
Group enriched
Detected in many
brain:
51.1
pineal gland:
23.5
PIP5K1C
ENSSSCG00000013490
ENSG00000186111
Phosphatidylinositol-4-phosphate 5-kinase type 1 gamma
Tissue enhanced
Detected in all
brain:
50.9
PIPOX
ENSSSCG00000017781
ENSG00000179761
Pipecolic acid and sarcosine oxidase
Tissue enhanced
Detected in many
kidney:
38.4
liver:
34.0
retina:
17.6
PKIB
ENSSSCG00000004236
ENSG00000135549
CAMP-dependent protein kinase inhibitor beta
Tissue enhanced
Detected in many
brain:
30.0
cornea:
40.2
male glands:
32.0
stomach:
35.0
PKLR
ENSSSCG00000026149
ENSG00000143627
Pyruvate kinase L/R
Tissue enriched
Detected in some
liver:
53.5
PKM
ENSSSCG00000001930
ENSG00000067225
Pyruvate kinase M1/2
Tissue enhanced
Detected in all
skeletal muscle:
301.5
PLA2G4A
ENSSSCG00000023351
ENSG00000116711
Phospholipase A2 group IVA
Low tissue specificity
Detected in many
PLA2R1
ENSSSCG00000015885
ENSG00000153246
Phospholipase A2 receptor 1
Tissue enhanced
Detected in many
brain:
67.1
epididymis:
32.4
retina:
25.7
PLAG1
ENSSSCG00000006247
ENSG00000181690
PLAG1 zinc finger
Low tissue specificity
Detected in many
PLAU
ENSSSCG00000010312
ENSG00000122861
Urokinase-type plasminogen activator precursor
Tissue enhanced
Detected in many
mesothelial tissue:
27.6
synovial tissue:
61.9
PLEKHG6
ENSSSCG00000000709
ENSG00000008323
Pleckstrin homology and RhoGEF domain containing G6
Tissue enhanced
Detected in many
large intestine:
18.6
mouth:
23.8
small intestine:
19.9
PLET1
ENSSSCG00000032149
ENSG00000188771
Placenta-expressed transcript 1 protein precursor
Tissue enriched
Detected in some
skin:
33.7
PLPP4
ENSSSCG00000010691
ENSG00000203805
Phospholipid phosphatase 4
Tissue enhanced
Detected in many
brain:
19.1
heart:
10.0
kidney:
26.1
PMM1
ENSSSCG00000000061
ENSG00000100417
Phosphomannomutase 1
Tissue enhanced
Detected in all
kidney:
67.1
retina:
55.4
PON1
ENSSSCG00000015332
ENSG00000005421
Serum paraoxonase/arylesterase 1 precursor
Group enriched
Detected in some
kidney:
41.1
liver:
90.4
POU2F3
ENSSSCG00000028237
ENSG00000137709
POU class 2 homeobox 3
Group enriched
Detected in some
breast:
35.7
skin:
88.7
PPARG
ENSSSCG00000011579
ENSG00000132170
Peroxisome proliferator-activated receptor gamma
Tissue enhanced
Detected in many
adipose tissue:
52.9
aorta:
32.5
bone marrow:
41.6
large intestine:
29.5
lymphoid tissue:
33.8
PPP1R1A
ENSSSCG00000000298
ENSG00000135447
Protein phosphatase 1 regulatory inhibitor subunit 1A
Tissue enriched
Detected in many
skeletal muscle:
231.9
PPP1R3C
ENSSSCG00000010464
ENSG00000119938
Protein phosphatase 1 regulatory subunit 3C
Tissue enhanced
Detected in many
cartilage:
76.4
cornea:
52.4
heart:
76.5
PPP2R2B
ENSSSCG00000028976
ENSG00000156475
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform
Tissue enhanced
Detected in many
brain:
38.4
cornea:
32.3
lens:
62.1
retina:
33.4
PRIM2
ENSSSCG00000001493
ENSG00000146143
DNA primase large subunit
Tissue enhanced
Detected in all
kidney:
30.9
PRLR
ENSSSCG00000016830
ENSG00000113494
Prolactin receptor precursor
Tissue enhanced
Detected in many
adrenal gland:
51.2
choroid plexus:
87.3
PROC
ENSSSCG00000023693
ENSG00000115718
Vitamin K-dependent protein C precursor
Tissue enriched
Detected in some
liver:
156.9
PRODH2
ENSSSCG00000002913
ENSG00000250799
Proline dehydrogenase 2
Group enriched
Detected in some
kidney:
77.2
liver:
41.9
PROM2
ENSSSCG00000008118
ENSG00000155066
Prominin 2
Tissue enhanced
Detected in many
cornea:
71.6
stomach:
54.5
PTER
ENSSSCG00000022953
ENSG00000165983
Phosphotriesterase-related protein
Tissue enhanced
Detected in all
kidney:
61.1
PTGER1
ENSSSCG00000013782
ENSG00000160951
Prostaglandin E receptor 1
Tissue enriched
Detected in many
kidney:
18.3
PTGIS
ENSSSCG00000007463
ENSG00000124212
Prostaglandin I2 synthase
Tissue enhanced
Detected in many
penis:
81.8
PTGS2
ENSSSCG00000015579
ENSG00000073756
Prostaglandin G/H synthase 2 precursor
Low tissue specificity
Detected in many
PTH1R
ENSSSCG00000011326
ENSG00000160801
Parathyroid hormone/parathyroid hormone-related peptide receptor
Tissue enhanced
Detected in many
cartilage:
47.4
kidney:
49.9
PTPRCAP
ENSSSCG00000012909
ENSG00000213402
Protein tyrosine phosphatase, receptor type C associated protein
Tissue enhanced
Detected in many
lung:
35.4
lymphoid tissue:
108.0
small intestine:
39.3
upper respiratory system:
46.9
PTPRO
ENSSSCG00000000601
ENSG00000151490
Protein tyrosine phosphatase, receptor type O
Tissue enriched
Detected in some
lens:
86.9
PTPRQ
ENSSSCG00000031716
ENSG00000139304
Protein tyrosine phosphatase, receptor type Q
Tissue enhanced
Detected in some
choroid plexus:
37.4
kidney:
21.3
mesothelial tissue:
74.0
PTPRT
ENSSSCG00000038990
ENSG00000196090
Protein tyrosine phosphatase, receptor type T
Tissue enriched
Detected in many
brain:
22.5
PYROXD2
ENSSSCG00000010533
ENSG00000119943
Pyridine nucleotide-disulphide oxidoreductase domain 2
Tissue enhanced
Detected in many
kidney:
41.0
QPCT
ENSSSCG00000008491
ENSG00000115828
Glutaminyl-peptide cyclotransferase
Tissue enhanced
Detected in many
adrenal gland:
70.4
pituitary gland:
28.7
QSOX1
ENSSSCG00000015535
ENSG00000116260
Quiescin sulfhydryl oxidase 1
Tissue enhanced
Detected in all
liver:
66.8
male glands:
91.5
stomach:
77.5
R3HDML
ENSSSCG00000007370
ENSG00000101074
R3H domain containing like
Tissue enriched
Detected in some
lens:
65.8
RAB11FIP3
ENSSSCG00000035854
ENSG00000090565
RAB11 family interacting protein 3
Tissue enhanced
Detected in all
kidney:
45.8
RAB15
ENSSSCG00000002280
ENSG00000139998
RAB15, member RAS oncogene family
Tissue enriched
Detected in many
lens:
89.5
RAB20
ENSSSCG00000022719
ENSG00000139832
RAB20, member RAS oncogene family
Tissue enhanced
Detected in many
heart:
26.5
RANBP3L
ENSSSCG00000016838
ENSG00000164188
RAN binding protein 3 like
Tissue enriched
Detected in many
kidney:
94.2
RARRES2
ENSSSCG00000035419
ENSG00000106538
Retinoic acid receptor responder protein 2 precursor
Tissue enhanced
Detected in all
kidney:
123.4
liver:
125.8
RASAL1
ENSSSCG00000009874
ENSG00000111344
RAS protein activator like 1
Tissue enhanced
Detected in many
adrenal gland:
30.1
salivary gland:
46.4
RASL10B
ENSSSCG00000036746
ENSG00000270885
RAS like family 10 member B
Tissue enhanced
Detected in many
brain:
32.6
heart:
23.2
RASSF5
ENSSSCG00000031970
ENSG00000266094
Ras association domain family member 5
Tissue enhanced
Detected in many
lymphoid tissue:
46.0
salivary gland:
33.0
RBP5
ENSSSCG00000039512
ENSG00000139194
Retinol-binding protein 5
Group enriched
Detected in all
kidney:
79.5
liver:
41.6
RDH5
ENSSSCG00000000362
ENSG00000135437
Retinol dehydrogenase 5
Tissue enhanced
Detected in many
adipose tissue:
26.7
aorta:
30.2
brain:
23.6
choroid plexus:
16.3
REEP1
ENSSSCG00000023710
ENSG00000068615
Receptor accessory protein 1
Tissue enhanced
Detected in many
brain:
26.5
lens:
63.7
« prev
| Page
of 19 |
next »