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Gene name
Human disease related genes
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UMAP gene cluster
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
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16
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
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Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
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TECHNICAL DATA
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916 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
NAPRT
ENSSSCG00000031825
ENSG00000147813
Nicotinate phosphoribosyltransferase
Tissue enhanced
Detected in all
kidney:
50.4
NAT8
ENSSSCG00000021579
ENSG00000144035
N-acetyltransferase 8 (putative)
Group enriched
Detected in all
kidney:
45.3
liver:
80.8
NCALD
ENSSSCG00000006059
ENSG00000104490
Neurocalcin-delta
Tissue enhanced
Detected in many
brain:
50.1
lens:
34.5
NCCRP1
ENSSSCG00000026407
ENSG00000188505
Non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)
Tissue enhanced
Detected in many
cornea:
45.8
mouth:
50.5
urinary bladder:
41.3
NECTIN1
ENSSSCG00000015125
ENSG00000110400
Nectin-1 precursor
Tissue enhanced
Detected in many
skin:
34.6
urinary bladder:
38.1
NEIL1
ENSSSCG00000001882
ENSG00000140398
Nei like DNA glycosylase 1
Tissue enhanced
Detected in all
kidney:
36.0
liver:
51.3
NEURL1B
ENSSSCG00000016992
ENSG00000214357
Neuralized E3 ubiquitin protein ligase 1B
Low tissue specificity
Detected in many
NIPAL1
ENSSSCG00000037950
ENSG00000163293
NIPA like domain containing 1
Tissue enhanced
Detected in many
male glands:
42.3
NIT1
ENSSSCG00000037793
ENSG00000158793
Nitrilase 1
Tissue enhanced
Detected in all
kidney:
51.0
NKG7
ENSSSCG00000003231
ENSG00000105374
Protein NKG7
Tissue enhanced
Detected in many
bone marrow:
28.4
lung:
28.3
NNAT
ENSSSCG00000007336
ENSG00000053438
Neuronatin
Tissue enriched
Detected in many
pituitary gland:
708.6
NOV
ENSSSCG00000006002
ENSG00000136999
Nephroblastoma overexpressed
Tissue enhanced
Detected in many
dura mater:
78.5
penis:
103.9
NOX4
ENSSSCG00000014927
ENSG00000086991
NADPH oxidase 4
Tissue enhanced
Detected in many
kidney:
56.0
lens:
24.9
NPHS1
ENSSSCG00000029284
ENSG00000161270
NPHS1, nephrin
Tissue enriched
Detected in some
vagus nerve:
34.0
NPHS2
ENSSSCG00000015526
ENSG00000116218
NPHS2, podocin
Tissue enriched
Detected in some
kidney:
69.5
NPL
ENSSSCG00000022292
ENSG00000135838
N-acetylneuraminate lyase
Tissue enhanced
Detected in many
lymphoid tissue:
26.3
skin:
27.8
NR1H4
ENSSSCG00000000875
ENSG00000012504
Bile acid receptor
Tissue enhanced
Detected in some
adrenal gland:
22.5
liver:
68.0
small intestine:
44.1
thyroid gland:
35.6
NR1I2
ENSSSCG00000011890
ENSG00000144852
Nuclear receptor subfamily 1 group I member 2
Tissue enhanced
Detected in all
large intestine:
34.3
liver:
64.9
small intestine:
39.5
NRG4
ENSSSCG00000001860
ENSG00000169752
Neuregulin 4
Tissue enhanced
Detected in many
brain:
66.0
male glands:
67.5
NRGN
ENSSSCG00000039322
ENSG00000154146
Neurogranin
Tissue enriched
Detected in many
brain:
320.1
NT5C1A
ENSSSCG00000003662
ENSG00000116981
5'-nucleotidase, cytosolic IA
Group enriched
Detected in some
heart:
74.3
skeletal muscle:
50.7
NTN5
ENSSSCG00000003146
ENSG00000142233
Netrin 5
Tissue enhanced
Detected in many
male glands:
37.7
NUPR1
ENSSSCG00000040162
ENSG00000176046
Nuclear protein 1, transcriptional regulator
Tissue enhanced
Detected in many
kidney:
107.6
liver:
104.2
salivary gland:
176.4
NWD2
ENSSSCG00000008770
ENSG00000174145
NACHT and WD repeat domain containing 2
Tissue enhanced
Detected in many
brain:
20.4
male glands:
11.4
pituitary gland:
21.0
OLFM1
ENSSSCG00000029715
ENSG00000130558
Olfactomedin 1
Tissue enhanced
Detected in many
brain:
87.2
lens:
29.0
OPRK1
ENSSSCG00000006264
ENSG00000082556
Opioid receptor kappa 1
Tissue enhanced
Detected in many
brain:
17.7
kidney:
16.8
pituitary gland:
15.5
OSGIN1
ENSSSCG00000032115
ENSG00000140961
Oxidative stress induced growth inhibitor 1
Tissue enhanced
Detected in many
adrenal gland:
46.7
liver:
67.6
testis:
35.1
OSR2
ENSSSCG00000006073
ENSG00000164920
Odd-skipped related transciption factor 2
Tissue enhanced
Detected in many
cervix:
47.6
ductus deferens:
50.6
OXGR1
ENSSSCG00000024459
ENSG00000165621
Oxoglutarate receptor 1
Tissue enriched
Detected in some
kidney:
19.0
P4HTM
ENSSSCG00000011368
ENSG00000178467
Prolyl 4-hydroxylase, transmembrane
Tissue enhanced
Detected in many
brain:
19.7
kidney:
17.3
PAH
ENSSSCG00000000856
ENSG00000171759
Phenylalanine hydroxylase
Tissue enriched
Detected in some
liver:
213.5
PAPLN
ENSSSCG00000002341
ENSG00000100767
Papilin, proteoglycan like sulfated glycoprotein
Tissue enriched
Detected in many
kidney:
72.8
PAPSS1
ENSSSCG00000031901
ENSG00000138801
3'-phosphoadenosine 5'-phosphosulfate synthase 1
Tissue enhanced
Detected in all
cartilage:
53.4
PC
ENSSSCG00000012926
ENSG00000173599
Pyruvate carboxylase, mitochondrial
Tissue enriched
Detected in many
adipose tissue:
202.1
PCCB
ENSSSCG00000011653
ENSG00000114054
Propionyl-CoA carboxylase beta chain, mitochondrial
Low tissue specificity
Detected in all
PCK1
ENSSSCG00000007507
ENSG00000124253
Phosphoenolpyruvate carboxykinase, cytosolic
Group enriched
Detected in some
adipose tissue:
36.3
kidney:
141.2
liver:
139.0
PCK2
ENSSSCG00000002009
ENSG00000100889
Phosphoenolpyruvate carboxykinase
Group enriched
Detected in many
kidney:
61.6
liver:
92.9
PCP4
ENSSSCG00000037110
ENSG00000183036
Purkinje cell protein 4
Tissue enhanced
Detected in many
brain:
191.5
cervix:
123.3
choroid plexus:
146.3
pineal gland:
203.2
PDE5A
ENSSSCG00000009106
ENSG00000138735
Phosphodiesterase 5A
Tissue enhanced
Detected in many
smooth muscle:
69.7
PDK2
ENSSSCG00000027198
ENSG00000005882
Pyruvate dehydrogenase kinase 2
Low tissue specificity
Detected in all
PDZD3
ENSSSCG00000027710
ENSG00000172367
PDZ domain containing 3
Tissue enhanced
Detected in all
kidney:
41.1
PDZK1
ENSSSCG00000006693
ENSG00000174827
PDZ domain containing 1
Tissue enhanced
Detected in many
epididymis:
69.2
kidney:
109.6
small intestine:
49.1
PEG10
ENSSSCG00000036049
ENSG00000242265
Sus scrofa paternally expressed 10 (PEG10), transcript variant 2, mRNA.
Group enriched
Detected in many
brain:
98.3
pituitary gland:
71.1
PEPD
ENSSSCG00000002868
ENSG00000124299
Peptidase D
Tissue enhanced
Detected in all
kidney:
60.2
PFKFB3
ENSSSCG00000011133
ENSG00000170525
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
Tissue enhanced
Detected in many
cartilage:
45.0
kidney:
49.1
skeletal muscle:
57.0
PGC
ENSSSCG00000001625
ENSG00000096088
Progastricsin
Tissue enriched
Detected in some
stomach:
240.5
PGLYRP2
ENSSSCG00000025560
ENSG00000161031
N-acetylmuramoyl-L-alanine amidase precursor
Tissue enhanced
Detected in some
kidney:
7.9
liver:
27.9
PGR
ENSSSCG00000014977
ENSG00000082175
Progesterone receptor
Group enriched
Detected in some
cervix:
95.0
endometrium:
59.6
fallopian tube:
30.2
PHLDA2
ENSSSCG00000021597
ENSG00000181649
Pleckstrin homology-like domain family A member 2
Tissue enhanced
Detected in many
urinary bladder:
47.4
PHYH
ENSSSCG00000039244
ENSG00000107537
Phytanoyl-CoA dioxygenase, peroxisomal
Tissue enhanced
Detected in all
liver:
56.3
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