We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
382 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 8 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000033797
Tissue enhanced
Detected in many
large intestine:
91.6
lung:
90.7
small intestine:
87.1
upper respiratory system:
319.4
na
ENSSSCG00000033927
Tissue enhanced
Detected in many
adipose tissue:
12.7
fallopian tube:
24.0
mesothelial tissue:
53.3
na
ENSSSCG00000034133
Tissue enhanced
Detected in many
brain:
82.7
dura mater:
39.7
na
ENSSSCG00000034340
Tissue enriched
Detected in some
choroid plexus:
246.7
na
ENSSSCG00000035086
Group enriched
Detected in some
brain:
101.7
cornea:
57.5
epididymis:
47.9
kidney:
68.2
male glands:
118.2
na
ENSSSCG00000035337
Tryptase
Tissue enhanced
Detected in many
adipose tissue:
29.3
gallbladder:
54.4
na
ENSSSCG00000036224
Tissue enhanced
Detected in many
large intestine:
253.9
lung:
262.8
small intestine:
278.8
upper respiratory system:
745.2
na
ENSSSCG00000036244
ENSG00000283787
Tissue enhanced
Detected in many
male glands:
18.2
skeletal muscle:
41.3
na
ENSSSCG00000036305
ENSG00000235169
Tissue enhanced
Detected in many
choroid plexus:
28.2
heart:
24.7
male glands:
21.4
thyroid gland:
22.9
na
ENSSSCG00000036346
Low tissue specificity
Detected in all
na
ENSSSCG00000036948
ENSG00000163395
Tissue enhanced
Detected in some
lung:
12.9
skeletal muscle:
52.2
synovial tissue:
16.1
na
ENSSSCG00000037142
Low tissue specificity
Detected in all
na
ENSSSCG00000037480
Tissue enhanced
Detected in many
choroid plexus:
48.1
na
ENSSSCG00000037555
Tissue enhanced
Detected in many
mesothelial tissue:
32.3
na
ENSSSCG00000037693
Tissue enhanced
Detected in all
liver:
27.7
na
ENSSSCG00000037788
Tissue enhanced
Detected in many
large intestine:
26.2
lymphoid tissue:
18.7
na
ENSSSCG00000037884
Tissue enhanced
Detected in many
cornea:
17.1
na
ENSSSCG00000037885
Tissue enriched
Detected in many
lymphoid tissue:
156.6
na
ENSSSCG00000037915
Low tissue specificity
Detected in many
na
ENSSSCG00000039001
Tissue enhanced
Detected in many
thyroid gland:
17.9
na
ENSSSCG00000039500
ENSG00000099866
Mucosal addressin cell adhesion molecule 1 precursor
Tissue enhanced
Detected in many
large intestine:
14.1
lymphoid tissue:
30.2
small intestine:
13.3
na
ENSSSCG00000040129
Tissue enhanced
Detected in many
brain:
67.8
cervix:
39.8
na
ENSSSCG00000040545
Tissue enhanced
Detected in many
brain:
18.9
na
ENSSSCG00000040592
Tissue enriched
Detected in some
upper respiratory system:
3262.8
na
ENSSSCG00000040748
Tissue enhanced
Detected in many
male glands:
25.3
NCCRP1
ENSSSCG00000026407
ENSG00000188505
Non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)
Tissue enhanced
Detected in many
cornea:
45.8
mouth:
50.5
urinary bladder:
41.3
NCF1
ENSSSCG00000007722
ENSG00000158517
Neutrophil cytosol factor 1
Tissue enhanced
Detected in many
lymphoid tissue:
34.1
NDRG4
ENSSSCG00000021911
ENSG00000103034
NDRG family member 4
Tissue enhanced
Detected in many
brain:
86.8
cervix:
82.2
NEO1
ENSSSCG00000001921
ENSG00000067141
Neogenin 1
Low tissue specificity
Detected in all
NFASC
ENSSSCG00000022951
ENSG00000163531
Neurofascin
Tissue enhanced
Detected in some
brain:
47.9
pineal gland:
18.3
vagus nerve:
46.6
NKAIN2
ENSSSCG00000036607
ENSG00000188580
Sodium/potassium transporting ATPase interacting 2
Tissue enriched
Detected in some
brain:
44.6
NPTXR
ENSSSCG00000000092
ENSG00000221890
Neuronal pentraxin receptor
Tissue enriched
Detected in many
brain:
54.3
OLR1
ENSSSCG00000000647
ENSG00000173391
Oxidized low-density lipoprotein receptor 1
Tissue enhanced
Detected in all
mesothelial tissue:
44.0
OPCML
ENSSSCG00000037534
ENSG00000183715
Opioid binding protein/cell adhesion molecule like
Tissue enriched
Detected in some
brain:
42.1
OSR2
ENSSSCG00000006073
ENSG00000164920
Odd-skipped related transciption factor 2
Tissue enhanced
Detected in many
cervix:
47.6
ductus deferens:
50.6
PAMR1
ENSSSCG00000028338
ENSG00000149090
Inactive serine protease PAMR1 precursor
Tissue enhanced
Detected in many
brain:
29.4
PARD6B
ENSSSCG00000027206
ENSG00000124171
Partitioning defective 6 homolog beta
Low tissue specificity
Detected in many
PBX4
ENSSSCG00000013933
ENSG00000105717
PBX homeobox 4
Tissue enhanced
Detected in many
testis:
41.1
PEG10
ENSSSCG00000036049
ENSG00000242265
Sus scrofa paternally expressed 10 (PEG10), transcript variant 2, mRNA.
Group enriched
Detected in many
brain:
98.3
pituitary gland:
71.1
PERP
ENSSSCG00000038420
ENSG00000112378
P53 apoptosis effector related to PMP-22
Tissue enhanced
Detected in many
cornea:
115.4
mouth:
93.3
skin:
53.2
PHGDH
ENSSSCG00000006717
ENSG00000092621
D-3-phosphoglycerate dehydrogenase
Tissue enhanced
Detected in many
brain:
44.1
endometrium:
80.4
PKHD1L1
ENSSSCG00000006025
ENSG00000205038
PKHD1 like 1
Tissue enhanced
Detected in many
adipose tissue:
16.8
fallopian tube:
30.0
mesothelial tissue:
57.5
PLAC8
ENSSSCG00000009240
ENSG00000145287
Placenta specific 8
Group enriched
Detected in many
adipose tissue:
33.1
lymphoid tissue:
51.6
mesothelial tissue:
49.4
PLCE1
ENSSSCG00000010483
ENSG00000138193
Phospholipase C epsilon 1
Tissue enhanced
Detected in many
cartilage:
33.9
stomach:
42.4
PLD1
ENSSSCG00000011750
ENSG00000075651
Phospholipase D1
Low tissue specificity
Detected in many
PLOD2
ENSSSCG00000011689
ENSG00000152952
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2
Tissue enhanced
Detected in many
cartilage:
73.6
PODNL1
ENSSSCG00000013762
ENSG00000132000
Podocan like 1
Tissue enhanced
Detected in many
cartilage:
24.7
vagus nerve:
31.8
PRCD
ENSSSCG00000028604
ENSG00000214140
Photoreceptor disc component
Tissue enriched
Detected in many
retina:
128.9
PRDM16
ENSSSCG00000021490
ENSG00000142611
PR/SET domain 16
Tissue enhanced
Detected in many
lymphoid tissue:
33.7
PRDM6
ENSSSCG00000014238
ENSG00000061455
PR/SET domain 6
Tissue enhanced
Detected in many
cervix:
23.2
smooth muscle:
34.7
urinary bladder:
29.3
« prev
| Page
of 8 |
next »