We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
3143 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 63 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
LAX1
ENSSSCG00000033768
ENSG00000122188
Lymphocyte transmembrane adaptor 1
Tissue enriched
Detected in all
lymphoid tissue:
65.5
LBX1
ENSSSCG00000022693
ENSG00000138136
Transcription factor LBX1
Tissue enriched
Detected in some
skeletal muscle:
36.0
LCN1
ENSSSCG00000035964
ENSG00000160349
Lipocalin-1 precursor
Group enriched
Detected in some
esophagus:
521.6
upper respiratory system:
1195.4
LDB2
ENSSSCG00000029227
ENSG00000169744
LIM domain binding 2
Low tissue specificity
Detected in many
LEF1
ENSSSCG00000009148
ENSG00000138795
Lymphoid enhancer-binding factor 1
Tissue enriched
Detected in many
lymphoid tissue:
206.1
LGALS3
ENSSSCG00000005055
ENSG00000131981
Galectin-3
Tissue enhanced
Detected in many
large intestine:
168.2
lens:
152.6
LGALS4
ENSSSCG00000022017
ENSG00000171747
Galectin-4
Tissue enhanced
Detected in some
large intestine:
131.5
mouth:
193.3
small intestine:
49.3
stomach:
77.7
LGR5
ENSSSCG00000030511
ENSG00000139292
Leucine-rich repeat-containing G-protein coupled receptor 5 precursor
Tissue enhanced
Detected in many
skin:
34.4
LHFPL3
ENSSSCG00000035554
ENSG00000187416
LHFPL tetraspan subfamily member 3
Tissue enhanced
Detected in many
brain:
19.5
pineal gland:
52.9
retina:
54.9
LHFPL6
ENSSSCG00000029855
ENSG00000183722
LHFPL tetraspan subfamily member 6
Tissue enhanced
Detected in all
cervix:
76.3
LHX6
ENSSSCG00000005530
ENSG00000106852
LIM homeobox 6
Tissue enhanced
Detected in many
cartilage:
32.4
LHX8
ENSSSCG00000003778
ENSG00000162624
LIM/homeobox protein Lhx8
Group enriched
Detected in some
adipose tissue:
18.4
brain:
12.0
esophagus:
10.8
lymphoid tissue:
14.8
mouth:
18.3
LIFR
ENSSSCG00000016850
ENSG00000113594
LIF receptor alpha
Low tissue specificity
Detected in all
LIMCH1
ENSSSCG00000008799
ENSG00000064042
LIM and calponin homology domains 1
Tissue enhanced
Detected in all
vagus nerve:
77.2
LIMS2
ENSSSCG00000015862
ENSG00000072163
LIM zinc finger domain containing 2
Tissue enhanced
Detected in many
smooth muscle:
121.2
LIN7A
ENSSSCG00000040348
ENSG00000111052
Lin-7 homolog A, crumbs cell polarity complex component
Tissue enhanced
Detected in all
testis:
45.9
LIX1
ENSSSCG00000023396
ENSG00000145721
Limb and CNS expressed 1
Group enriched
Detected in many
heart:
54.7
lymphoid tissue:
21.5
smooth muscle:
25.8
LMAN1L
ENSSSCG00000001899
ENSG00000140506
Lectin, mannose binding 1 like
Group enriched
Detected in some
esophagus:
79.5
male glands:
267.8
salivary gland:
90.9
LMBR1
ENSSSCG00000016412
ENSG00000105983
Limb development membrane protein 1
Low tissue specificity
Detected in all
LMCD1
ENSSSCG00000011538
ENSG00000071282
LIM and cysteine-rich domains protein 1
Tissue enhanced
Detected in many
skeletal muscle:
57.1
LMNB1
ENSSSCG00000014248
ENSG00000113368
Lamin B1
Tissue enhanced
Detected in all
lymphoid tissue:
52.3
LMO2
ENSSSCG00000013307
ENSG00000135363
LIM domain only 2
Low tissue specificity
Detected in many
LMO7
ENSSSCG00000040184
ENSG00000136153
LIM domain 7
Tissue enhanced
Detected in many
heart:
81.5
LMOD1
ENSSSCG00000031201
ENSG00000163431
Leiomodin 1
Tissue enhanced
Detected in many
cervix:
83.2
smooth muscle:
104.3
LNX2
ENSSSCG00000009308
ENSG00000139517
Ligand of numb-protein X 2
Low tissue specificity
Detected in all
LOX
ENSSSCG00000014232
ENSG00000113083
Protein-lysine 6-oxidase precursor
Tissue enhanced
Detected in many
cartilage:
54.1
ovary:
44.2
LOXL1
ENSSSCG00000001914
ENSG00000129038
Lysyl oxidase like 1
Tissue enhanced
Detected in all
choroid plexus:
55.0
LOXL2
ENSSSCG00000033608
ENSG00000134013
Lysyl oxidase like 2
Tissue enhanced
Detected in many
cartilage:
85.0
LPAR3
ENSSSCG00000003756
ENSG00000171517
Lysophosphatidic acid receptor 3
Tissue enhanced
Detected in many
fallopian tube:
14.0
lung:
11.7
upper respiratory system:
13.2
LPAR4
ENSSSCG00000012445
ENSG00000147145
Lysophosphatidic acid receptor 4
Tissue enhanced
Detected in many
adipose tissue:
7.1
cartilage:
6.3
lymphoid tissue:
10.4
LPAR5
ENSSSCG00000000699
ENSG00000184574
Lysophosphatidic acid receptor 5
Tissue enhanced
Detected in many
lymphoid tissue:
23.0
stomach:
17.5
LPAR6
ENSSSCG00000036063
ENSG00000139679
Lysophosphatidic acid receptor 6
Low tissue specificity
Detected in all
LPCAT1
ENSSSCG00000017116
ENSG00000153395
Lysophosphatidylcholine acyltransferase 1
Tissue enhanced
Detected in all
lung:
33.7
LPIN3
ENSSSCG00000007359
ENSG00000132793
Phosphatidate phosphatase LPIN3
Low tissue specificity
Detected in many
LPXN
ENSSSCG00000021176
ENSG00000110031
Leupaxin
Tissue enhanced
Detected in many
lymphoid tissue:
46.3
upper respiratory system:
28.9
LRMDA
ENSSSCG00000034308
ENSG00000148655
Leucine rich melanocyte differentiation associated
Low tissue specificity
Detected in many
LRMP
ENSSSCG00000000563
ENSG00000118308
Lymphoid restricted membrane protein
Tissue enhanced
Detected in many
lymphoid tissue:
77.5
upper respiratory system:
34.9
LRP1
ENSSSCG00000000423
ENSG00000123384
LDL receptor related protein 1
Tissue enhanced
Detected in all
cartilage:
102.7
LRP5
ENSSSCG00000012885
ENSG00000162337
LDL receptor related protein 5
Low tissue specificity
Detected in all
LRP6
ENSSSCG00000000625
ENSG00000070018
LDL receptor related protein 6
Low tissue specificity
Detected in all
LRPAP1
ENSSSCG00000008701
ENSG00000163956
Alpha-2-macroglobulin receptor-associated protein precursor
Low tissue specificity
Detected in all
LRRC10B
ENSSSCG00000013088
ENSG00000204950
Leucine rich repeat containing 10B
Tissue enhanced
Detected in many
brain:
23.1
fallopian tube:
32.9
upper respiratory system:
32.2
LRRC18
ENSSSCG00000010384
ENSG00000165383
Leucine rich repeat containing 18
Tissue enhanced
Detected in some
choroid plexus:
19.8
testis:
86.6
upper respiratory system:
24.4
LRRC32
ENSSSCG00000014869
ENSG00000137507
Leucine rich repeat containing 32
Tissue enhanced
Detected in many
mesothelial tissue:
43.0
LRRC75B
ENSSSCG00000010057
ENSG00000178026
Leucine rich repeat containing 75B
Tissue enhanced
Detected in many
lens:
17.5
male glands:
13.8
LRRK1
ENSSSCG00000004823
ENSG00000154237
Leucine rich repeat kinase 1
Low tissue specificity
Detected in all
LRRK2
ENSSSCG00000000784
ENSG00000188906
Leucine-rich repeat serine/threonine-protein kinase 2
Tissue enhanced
Detected in all
lymphoid tissue:
45.3
LRRN1
ENSSSCG00000023806
ENSG00000175928
Leucine rich repeat neuronal 1
Group enriched
Detected in many
brain:
37.9
pineal gland:
27.7
LRRN4CL
ENSSSCG00000024917
ENSG00000177363
LRRN4 C-terminal like
Tissue enhanced
Detected in many
aorta:
82.7
mesothelial tissue:
67.1
synovial tissue:
43.1
LSAMP
ENSSSCG00000027941
ENSG00000185565
Limbic system-associated membrane protein precursor
Tissue enhanced
Detected in many
brain:
36.5
lens:
68.9
lymphoid tissue:
29.3
pineal gland:
33.4
« prev
| Page
of 63 |
next »