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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
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Gene name
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Cancers
Cardiovascular diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
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18
MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
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Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
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332 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000031608
Group enriched
Detected in some
heart:
91.9
skeletal muscle:
104.0
na
ENSSSCG00000031822
Group enriched
Detected in some
heart:
47.4
skeletal muscle:
37.3
na
ENSSSCG00000031960
Tissue enhanced
Detected in many
brain:
18.7
pituitary gland:
14.3
retina:
8.7
na
ENSSSCG00000032159
Tissue enhanced
Detected in many
brain:
51.7
cartilage:
28.3
cervix:
30.6
pineal gland:
40.2
na
ENSSSCG00000032503
Group enriched
Detected in some
epididymis:
14.4
heart:
14.6
lens:
19.1
lymphoid tissue:
5.6
upper respiratory system:
6.5
na
ENSSSCG00000032788
Tissue enhanced
Detected in many
fallopian tube:
23.1
na
ENSSSCG00000034123
Tissue enhanced
Detected in many
heart:
47.1
skeletal muscle:
20.1
na
ENSSSCG00000034184
Tissue enhanced
Detected in many
brain:
72.3
synovial tissue:
91.1
na
ENSSSCG00000034900
Tissue enhanced
Detected in some
brain:
20.6
heart:
6.1
retina:
12.4
na
ENSSSCG00000034949
Tissue enhanced
Detected in many
cartilage:
304.0
na
ENSSSCG00000035231
Tissue enhanced
Detected in many
adrenal gland:
66.1
heart:
71.6
na
ENSSSCG00000035460
Tissue enhanced
Detected in many
cartilage:
28.6
mesothelial tissue:
29.1
penis:
37.5
na
ENSSSCG00000035710
Tissue enhanced
Detected in many
fallopian tube:
68.2
lung:
30.4
na
ENSSSCG00000036109
ENSG00000101197
Tissue enriched
Detected in single
lens:
164.2
na
ENSSSCG00000036177
ENSG00000127324
Tissue enhanced
Detected in many
heart:
10.0
testis:
21.8
na
ENSSSCG00000036234
Group enriched
Detected in some
epididymis:
10.7
heart:
21.5
na
ENSSSCG00000036306
Tissue enhanced
Detected in some
brain:
47.9
heart:
58.7
pituitary gland:
45.8
na
ENSSSCG00000036361
Group enriched
Detected in some
heart:
13.5
male glands:
15.3
testis:
23.5
na
ENSSSCG00000037239
Tissue enhanced
Detected in all
epididymis:
78.9
na
ENSSSCG00000037403
Tissue enriched
Detected in many
heart:
39.4
na
ENSSSCG00000037458
Tissue enriched
Detected in some
heart:
28.9
na
ENSSSCG00000037480
Tissue enhanced
Detected in many
choroid plexus:
48.1
na
ENSSSCG00000037703
Tissue enriched
Detected in some
heart:
11.9
na
ENSSSCG00000038038
ENSG00000188322
Tissue enhanced
Detected in many
brain:
21.5
lymphoid tissue:
27.5
na
ENSSSCG00000039895
Tissue enhanced
Detected in many
kidney:
116.2
na
ENSSSCG00000040108
Tissue enhanced
Detected in many
brain:
16.8
ductus deferens:
17.6
kidney:
18.3
skeletal muscle:
19.1
na
ENSSSCG00000040606
Tissue enriched
Detected in some
heart:
105.2
NEGR1
ENSSSCG00000025085
ENSG00000172260
Neuronal growth regulator 1
Tissue enhanced
Detected in many
brain:
65.6
pineal gland:
21.1
pituitary gland:
20.4
retina:
20.9
NES
ENSSSCG00000006474
ENSG00000132688
Nestin
Group enriched
Detected in many
heart:
67.3
vagus nerve:
30.4
NOV
ENSSSCG00000006002
ENSG00000136999
Nephroblastoma overexpressed
Tissue enhanced
Detected in many
dura mater:
78.5
penis:
103.9
NPNT
ENSSSCG00000038801
ENSG00000168743
Nephronectin
Tissue enhanced
Detected in many
cornea:
52.6
thyroid gland:
41.8
NPPA
ENSSSCG00000003430
ENSG00000175206
Natriuretic peptides A precursor
Tissue enriched
Detected in some
heart:
932.9
NPPB
ENSSSCG00000003431
ENSG00000120937
Natriuretic peptides B Brain natriuretic peptide 32 Brain natriuretic peptide 26
Tissue enriched
Detected in some
heart:
105.4
NRG4
ENSSSCG00000001860
ENSG00000169752
Neuregulin 4
Tissue enhanced
Detected in many
brain:
66.0
male glands:
67.5
OLFML2B
ENSSSCG00000006345
ENSG00000162745
Olfactomedin like 2B
Tissue enhanced
Detected in many
smooth muscle:
70.2
OLR1
ENSSSCG00000000647
ENSG00000173391
Oxidized low-density lipoprotein receptor 1
Tissue enhanced
Detected in all
mesothelial tissue:
44.0
OPN4
ENSSSCG00000010358
ENSG00000122375
Opsin 4
Group enriched
Detected in some
endometrium:
8.2
testis:
29.8
thyroid gland:
26.0
OPRD1
ENSSSCG00000027401
ENSG00000116329
Opioid receptor delta 1
Tissue enriched
Detected in some
thyroid gland:
34.7
OSBPL3
ENSSSCG00000016715
ENSG00000070882
Oxysterol binding protein like 3
Low tissue specificity
Detected in many
OSR2
ENSSSCG00000006073
ENSG00000164920
Odd-skipped related transciption factor 2
Tissue enhanced
Detected in many
cervix:
47.6
ductus deferens:
50.6
PAH
ENSSSCG00000000856
ENSG00000171759
Phenylalanine hydroxylase
Tissue enriched
Detected in some
liver:
213.5
PALLD
ENSSSCG00000029331
ENSG00000129116
Palladin, cytoskeletal associated protein
Tissue enhanced
Detected in many
heart:
77.4
smooth muscle:
78.3
PCP4
ENSSSCG00000037110
ENSG00000183036
Purkinje cell protein 4
Tissue enhanced
Detected in many
brain:
191.5
cervix:
123.3
choroid plexus:
146.3
pineal gland:
203.2
PDE4A
ENSSSCG00000013642
ENSG00000065989
CAMP-specific 3',5'-cyclic phosphodiesterase 4A
Tissue enhanced
Detected in many
male glands:
60.9
skeletal muscle:
47.4
PDIA2
ENSSSCG00000007983
ENSG00000185615
Protein disulfide isomerase family A member 2
Group enriched
Detected in some
heart:
31.2
stomach:
21.0
PFKFB2
ENSSSCG00000015660
ENSG00000123836
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
Tissue enhanced
Detected in many
mouth:
32.0
skin:
57.4
PGP
ENSSSCG00000036614
ENSG00000184207
Phosphoglycolate phosphatase
Tissue enhanced
Detected in all
skeletal muscle:
43.4
testis:
47.1
PHEX
ENSSSCG00000012167
ENSG00000102174
Phosphate-regulating neutral endopeptidase
Tissue enhanced
Detected in many
aorta:
17.9
upper respiratory system:
18.1
PI15
ENSSSCG00000006172
ENSG00000137558
Peptidase inhibitor 15
Tissue enhanced
Detected in many
cervix:
24.7
ductus deferens:
31.3
endometrium:
27.6
PIP5K1B
ENSSSCG00000027161
ENSG00000107242
Phosphatidylinositol-4-phosphate 5-kinase type 1 beta
Tissue enhanced
Detected in many
choroid plexus:
94.9
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