We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
1362 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 28 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
TACSTD2
ENSSSCG00000003832
ENSG00000184292
Tumor associated calcium signal transducer 2
Tissue enhanced
Detected in many
cornea:
60.8
upper respiratory system:
52.2
urinary bladder:
76.7
TAGLN
ENSSSCG00000015073
ENSG00000149591
Transgelin
Tissue enhanced
Detected in many
smooth muscle:
633.1
TAL1
ENSSSCG00000035847
ENSG00000162367
TAL bHLH transcription factor 1, erythroid differentiation factor
Tissue enhanced
Detected in many
mesothelial tissue:
33.6
TAP1
ENSSSCG00000025618
ENSG00000168394
Antigen peptide transporter 1
Tissue enhanced
Detected in many
large intestine:
38.1
stomach:
49.4
TBC1D9
ENSSSCG00000032741
ENSG00000109436
TBC1 domain family member 9
Low tissue specificity
Detected in all
TBX1
ENSSSCG00000037762
ENSG00000184058
T-box 1
Tissue enhanced
Detected in many
mouth:
31.0
skin:
39.2
TBX18
ENSSSCG00000004290
ENSG00000112837
T-box 18
Tissue enriched
Detected in many
cartilage:
52.6
TBX4
ENSSSCG00000022980
ENSG00000121075
T-box transcription factor TBX4
Tissue enhanced
Detected in many
cartilage:
44.1
lung:
21.4
penis:
14.5
urinary bladder:
19.8
TBX5
ENSSSCG00000009867
ENSG00000089225
T-box 5
Tissue enriched
Detected in some
heart:
65.3
TDGF1
ENSSSCG00000023395
ENSG00000241186
Teratocarcinoma-derived growth factor 1
Tissue enhanced
Detected in many
fallopian tube:
23.4
TDRD10
ENSSSCG00000006546
ENSG00000163239
Tudor domain-containing protein 10
Low tissue specificity
Detected in many
TEAD4
ENSSSCG00000000736
ENSG00000197905
Transcriptional enhancer factor TEF-3
Tissue enhanced
Detected in many
mesothelial tissue:
35.0
skeletal muscle:
49.7
TEC
ENSSSCG00000008820
ENSG00000135605
Tec protein tyrosine kinase
Low tissue specificity
Detected in many
TEK
ENSSSCG00000005122
ENSG00000120156
TEK receptor tyrosine kinase
Low tissue specificity
Detected in many
TEKT3
ENSSSCG00000018028
ENSG00000125409
Tektin 3
Tissue enriched
Detected in some
testis:
68.4
TFAP2B
ENSSSCG00000025535
ENSG00000008196
Transcription factor AP-2-beta
Group enriched
Detected in many
breast:
49.4
epididymis:
82.5
TFPI2
ENSSSCG00000015322
ENSG00000105825
Tissue factor pathway inhibitor 2
Tissue enhanced
Detected in many
adipose tissue:
67.0
ovary:
75.3
TFRC
ENSSSCG00000011848
ENSG00000072274
Transferrin receptor protein 1
Low tissue specificity
Detected in all
TG
ENSSSCG00000005948
ENSG00000042832
Thyroglobulin precursor
Tissue enriched
Detected in some
thyroid gland:
1006.8
TGFA
ENSSSCG00000008326
ENSG00000163235
Protransforming growth factor alpha precursor
Group enriched
Detected in all
cartilage:
102.5
ovary:
30.9
TGFBI
ENSSSCG00000014316
ENSG00000120708
Transforming growth factor beta induced
Tissue enhanced
Detected in many
cartilage:
147.5
cornea:
213.4
TGFBR1
ENSSSCG00000005382
ENSG00000106799
TGF-beta receptor type-1 precursor
Low tissue specificity
Detected in all
TGM2
ENSSSCG00000023522
ENSG00000198959
Transglutaminase 2
Low tissue specificity
Detected in many
THBD
ENSSSCG00000007115
ENSG00000178726
Thrombomodulin precursor
Tissue enhanced
Detected in many
mesothelial tissue:
74.0
THBS3
ENSSSCG00000006524
ENSG00000169231
Thrombospondin 3
Tissue enriched
Detected in many
cartilage:
68.7
THSD1
ENSSSCG00000009377
ENSG00000136114
Thrombospondin type 1 domain containing 1
Low tissue specificity
Detected in many
THSD4
ENSSSCG00000004980
ENSG00000187720
Thrombospondin type 1 domain containing 4
Tissue enhanced
Detected in all
dura mater:
57.7
TIAM2
ENSSSCG00000004065
ENSG00000146426
T cell lymphoma invasion and metastasis 2
Tissue enhanced
Detected in many
brain:
33.8
cartilage:
71.5
TINAGL1
ENSSSCG00000003600
ENSG00000142910
Tubulointerstitial nephritis antigen like 1
Low tissue specificity
Detected in many
TLL1
ENSSSCG00000008853
ENSG00000038295
Tolloid like 1
Tissue enhanced
Detected in many
brain:
53.6
synovial tissue:
21.0
TM4SF18
ENSSSCG00000011701
ENSG00000163762
Transmembrane 4 L six family member 18
Low tissue specificity
Detected in all
TM6SF1
ENSSSCG00000001800
ENSG00000136404
Transmembrane 6 superfamily member 1
Low tissue specificity
Detected in many
TMEM121
ENSSSCG00000037022
ENSG00000184986
Transmembrane protein 121
Tissue enhanced
Detected in many
brain:
11.5
vagus nerve:
11.3
TMEM150C
ENSSSCG00000026729
ENSG00000249242
Transmembrane protein 150C
Tissue enriched
Detected in all
epididymis:
107.5
TMEM173
ENSSSCG00000014349
ENSG00000184584
Stimulator of interferon genes protein
Low tissue specificity
Detected in all
TMEM176A
ENSSSCG00000016443
ENSG00000002933
Transmembrane protein 176A
Tissue enhanced
Detected in many
gallbladder:
91.7
TMEM178A
ENSSSCG00000024293
ENSG00000152154
Transmembrane protein 178A
Tissue enriched
Detected in many
brain:
49.0
TMEM26
ENSSSCG00000023525
ENSG00000196932
Transmembrane protein 26
Tissue enhanced
Detected in some
brain:
24.4
ovary:
48.7
TMEM30B
ENSSSCG00000005094
ENSG00000182107
Transmembrane protein 30B
Tissue enhanced
Detected in many
male glands:
56.3
TMEM45A
ENSSSCG00000011965
ENSG00000181458
Transmembrane protein 45A
Tissue enhanced
Detected in all
cartilage:
21.6
TMEM51
ENSSSCG00000021026
ENSG00000171729
Transmembrane protein 51
Low tissue specificity
Detected in all
TMEM88
ENSSSCG00000037096
ENSG00000167874
Transmembrane protein 88
Low tissue specificity
Detected in many
TMEM98
ENSSSCG00000017727
ENSG00000006042
Transmembrane protein 98
Tissue enhanced
Detected in all
mesothelial tissue:
54.6
TMSB10
ENSSSCG00000008245
ENSG00000034510
Thymosin beta-10
Low tissue specificity
Detected in all
TMSB4X
ENSSSCG00000012119
ENSG00000205542
Thymosin beta-4 Hematopoietic system regulatory peptide
Low tissue specificity
Detected in all
TMTC1
ENSSSCG00000027447
ENSG00000133687
Transmembrane and tetratricopeptide repeat containing 1
Tissue enhanced
Detected in many
cartilage:
53.6
TNC
ENSSSCG00000005494
ENSG00000041982
Tenascin precursor
Tissue enhanced
Detected in many
cartilage:
169.5
smooth muscle:
64.2
synovial tissue:
56.1
TNFRSF11B
ENSSSCG00000027762
ENSG00000164761
TNF receptor superfamily member 11b
Tissue enhanced
Detected in many
cartilage:
27.5
dura mater:
43.7
TNFRSF19
ENSSSCG00000009283
ENSG00000127863
TNF receptor superfamily member 19
Low tissue specificity
Detected in all
TNFSF10
ENSSSCG00000020906
ENSG00000121858
Tumor necrosis factor ligand superfamily member 10
Tissue enhanced
Detected in all
liver:
91.0
« prev
| Page
of 28 |
next »