We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
1362 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 28 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
IL33
ENSSSCG00000005203
ENSG00000137033
Interleukin-33
Low tissue specificity
Detected in many
IL34
ENSSSCG00000040629
ENSG00000157368
Interleukin-34 precursor
Tissue enhanced
Detected in many
brain:
39.4
vagus nerve:
22.3
INHBA
ENSSSCG00000035077
ENSG00000122641
Inhibin beta A chain
Group enriched
Detected in many
cartilage:
119.6
ovary:
55.3
INMT
ENSSSCG00000016676
Indolethylamine N-methyltransferase
Tissue enriched
Detected in many
liver:
77.9
INPP5D
ENSSSCG00000016298
ENSG00000168918
Inositol polyphosphate-5-phosphatase D
Tissue enhanced
Detected in many
lymphoid tissue:
54.2
IRF5
ENSSSCG00000016573
ENSG00000128604
Interferon regulatory factor 5
Tissue enhanced
Detected in many
lymphoid tissue:
37.5
IRX1
ENSSSCG00000034884
ENSG00000170549
Iroquois homeobox 1
Tissue enhanced
Detected in many
breast:
42.9
esophagus:
28.4
salivary gland:
50.8
skin:
34.9
IRX2
ENSSSCG00000032074
ENSG00000170561
Iroquois homeobox 2
Tissue enhanced
Detected in many
breast:
24.7
salivary gland:
26.6
IRX3
ENSSSCG00000002831
ENSG00000177508
Iroquois homeobox 3
Tissue enhanced
Detected in many
breast:
24.6
male glands:
63.3
IRX5
ENSSSCG00000032145
ENSG00000176842
Iroquois homeobox 5
Tissue enhanced
Detected in many
breast:
32.9
male glands:
51.4
ISG12(A)
ENSSSCG00000035297
ENSG00000165949
Uncharacterized protein LOC100153902
Low tissue specificity
Detected in all
ISLR
ENSSSCG00000001910
ENSG00000129009
Immunoglobulin superfamily containing leucine rich repeat
Tissue enhanced
Detected in many
cartilage:
98.7
vagus nerve:
73.3
ISM1
ENSSSCG00000007073
ENSG00000101230
Isthmin 1
Tissue enhanced
Detected in many
cartilage:
84.7
ITGA10
ENSSSCG00000006687
ENSG00000143127
Integrin subunit alpha 10
Tissue enriched
Detected in all
cartilage:
55.2
ITGA6
ENSSSCG00000015955
ENSG00000091409
Integrin subunit alpha 6
Low tissue specificity
Detected in all
ITGA7
ENSSSCG00000036237
ENSG00000135424
Integrin subunit alpha 7
Tissue enhanced
Detected in many
adipose tissue:
76.7
ITGA8
ENSSSCG00000011046
ENSG00000077943
Integrin subunit alpha 8
Tissue enhanced
Detected in many
cervix:
61.7
endometrium:
34.7
fallopian tube:
40.9
ITGAV
ENSSSCG00000016027
ENSG00000138448
Integrin alpha-V precursor
Tissue enhanced
Detected in all
ovary:
65.8
ITGB4
ENSSSCG00000017204
ENSG00000132470
Integrin subunit beta 4
Tissue enhanced
Detected in many
vagus nerve:
116.2
ITGB8
ENSSSCG00000015375
ENSG00000105855
Integrin beta-8 precursor
Tissue enhanced
Detected in many
brain:
49.6
vagus nerve:
60.5
ITGBL1
ENSSSCG00000009526
ENSG00000198542
Integrin subunit beta like 1
Tissue enhanced
Detected in many
aorta:
29.7
cornea:
42.0
dura mater:
31.8
vagus nerve:
32.9
ITIH4
ENSSSCG00000011453
ENSG00000055955
Inter-alpha-trypsin inhibitor heavy chain H4 precursor
Tissue enhanced
Detected in many
cervix:
61.4
liver:
161.3
ITIH5
ENSSSCG00000011129
ENSG00000123243
Inter-alpha-trypsin inhibitor heavy chain family member 5
Low tissue specificity
Detected in all
ITM2C
ENSSSCG00000016267
ENSG00000135916
Integral membrane protein 2C CT-BRI3
Low tissue specificity
Detected in all
IVNS1ABP
ENSSSCG00000015570
ENSG00000116679
Influenza virus NS1A-binding protein
Tissue enhanced
Detected in all
cartilage:
83.1
heart:
87.1
lens:
148.0
JAG2
ENSSSCG00000002555
ENSG00000184916
Jagged 2
Low tissue specificity
Detected in many
JAKMIP2
ENSSSCG00000014420
ENSG00000176049
Janus kinase and microtubule interacting protein 2
Tissue enhanced
Detected in some
brain:
19.6
cartilage:
9.9
pineal gland:
10.1
pituitary gland:
7.9
JCAD
ENSSSCG00000011020
ENSG00000165757
Junctional cadherin 5 associated
Low tissue specificity
Detected in all
JPH1
ENSSSCG00000006174
ENSG00000104369
Junctophilin 1
Tissue enhanced
Detected in many
choroid plexus:
37.4
skeletal muscle:
98.5
JPH4
ENSSSCG00000002014
ENSG00000092051
Junctophilin 4
Group enriched
Detected in many
brain:
44.3
testis:
30.8
KANK4
ENSSSCG00000003821
ENSG00000132854
KN motif and ankyrin repeat domains 4
Tissue enriched
Detected in many
vagus nerve:
84.4
KCNA1
ENSSSCG00000000716
ENSG00000111262
Potassium voltage-gated channel subfamily A member 1
Group enriched
Detected in some
adrenal gland:
64.8
brain:
42.6
KCND2
ENSSSCG00000016621
ENSG00000184408
Potassium voltage-gated channel subfamily D member 2
Tissue enriched
Detected in many
brain:
79.7
KCND3
ENSSSCG00000026680
ENSG00000171385
Potassium voltage-gated channel subfamily D member 3
Tissue enhanced
Detected in many
brain:
26.8
KCNK1
ENSSSCG00000010163
ENSG00000135750
Potassium two pore domain channel subfamily K member 1
Tissue enhanced
Detected in many
brain:
63.0
epididymis:
45.4
male glands:
31.4
KCNK5
ENSSSCG00000025423
ENSG00000164626
Potassium two pore domain channel subfamily K member 5
Tissue enhanced
Detected in many
cartilage:
29.6
kidney:
24.7
KCNMA1
ENSSSCG00000010325
ENSG00000156113
Calcium-activated potassium channel subunit alpha-1
Tissue enhanced
Detected in many
cervix:
87.5
pineal gland:
73.5
smooth muscle:
70.9
KCNMB1
ENSSSCG00000017005
ENSG00000145936
Potassium calcium-activated channel subfamily M regulatory beta subunit 1
Tissue enhanced
Detected in many
ductus deferens:
58.9
smooth muscle:
109.2
KCNN2
ENSSSCG00000014213
ENSG00000080709
Potassium calcium-activated channel subfamily N member 2
Tissue enhanced
Detected in many
adrenal gland:
33.7
liver:
43.1
male glands:
49.4
KCNN3
ENSSSCG00000006542
ENSG00000143603
Small conductance calcium-activated potassium channel protein 3
Tissue enhanced
Detected in many
penis:
52.7
smooth muscle:
52.1
KCNQ5
ENSSSCG00000004281
ENSG00000185760
Potassium voltage-gated channel subfamily Q member 5
Group enriched
Detected in many
brain:
24.8
cartilage:
65.1
KCNT2
ENSSSCG00000010892
ENSG00000162687
Potassium sodium-activated channel subfamily T member 2
Tissue enhanced
Detected in many
brain:
24.0
heart:
12.7
pituitary gland:
17.4
KDR
ENSSSCG00000008844
ENSG00000128052
Kinase insert domain receptor
Low tissue specificity
Detected in many
KERA
ENSSSCG00000000917
ENSG00000139330
Keratocan
Tissue enriched
Detected in many
cornea:
288.6
KHDRBS3
ENSSSCG00000005941
ENSG00000131773
KH RNA binding domain containing, signal transduction associated 3
Group enriched
Detected in many
brain:
38.0
testis:
45.1
KIAA1522
ENSSSCG00000037621
ENSG00000162522
KIAA1522
Tissue enhanced
Detected in many
male glands:
57.0
stomach:
72.7
KIAA1551
ENSSSCG00000030616
ENSG00000174718
Uncharacterized
Low tissue specificity
Detected in all
KIAA2012
ENSSSCG00000016110
ENSG00000182329
KIAA2012
Tissue enhanced
Detected in many
choroid plexus:
15.2
fallopian tube:
20.5
lung:
21.6
upper respiratory system:
38.7
KIF21B
ENSSSCG00000021706
ENSG00000116852
Kinesin family member 21B
Tissue enhanced
Detected in many
brain:
29.8
stomach:
22.5
KIF26A
ENSSSCG00000035093
ENSG00000066735
Kinesin family member 26A
Tissue enhanced
Detected in many
heart:
23.5
« prev
| Page
of 28 |
next »