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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Subclass
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Biological process
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Disease
Keyword
Chromosome
1
2
3
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5
6
7
8
9
10
11
12
13
14
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18
MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
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Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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4635 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
NRSN1
ENSSSCG00000021696
ENSG00000152954
Neurensin 1
Tissue enriched
Detected in many
brain:
50.9
NRSN2
ENSSSCG00000031519
ENSG00000125841
Neurensin 2
Tissue enhanced
Detected in all
brain:
24.3
NRXN1
ENSSSCG00000008419
ENSG00000179915
Neurexin 1
Tissue enhanced
Detected in many
bone marrow:
25.5
brain:
62.7
pituitary gland:
24.4
NSDHL
ENSSSCG00000012758
ENSG00000147383
Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating
Tissue enhanced
Detected in all
testis:
52.1
NSF
ENSSSCG00000017316
ENSG00000073969
Vesicle-fusing ATPase
Group enriched
Detected in all
brain:
64.6
pineal gland:
31.4
pituitary gland:
17.8
retina:
24.6
NSG1
ENSSSCG00000024892
ENSG00000168824
Neuronal vesicle trafficking associated 1
Tissue enhanced
Detected in many
brain:
56.3
pineal gland:
28.5
pituitary gland:
27.4
NSG2
ENSSSCG00000016979
ENSG00000170091
Neuronal vesicle trafficking associated 2
Group enriched
Detected in some
brain:
78.7
pituitary gland:
20.0
NSUN7
ENSSSCG00000024496
ENSG00000179299
NOP2/Sun RNA methyltransferase family member 7
Tissue enhanced
Detected in some
choroid plexus:
16.3
testis:
46.9
upper respiratory system:
19.9
NT5DC2
ENSSSCG00000011444
ENSG00000168268
5'-nucleotidase domain containing 2
Tissue enriched
Detected in all
lens:
131.7
NT5DC3
ENSSSCG00000000853
ENSG00000111696
5'-nucleotidase domain containing 3
Tissue enhanced
Detected in many
brain:
42.7
NTHL1
ENSSSCG00000008039
ENSG00000065057
Nth like DNA glycosylase 1
Low tissue specificity
Detected in all
NTM
ENSSSCG00000015253
ENSG00000182667
Neurotrimin
Group enriched
Detected in many
brain:
38.2
gallbladder:
14.3
lens:
17.6
pineal gland:
30.5
retina:
15.2
NTN1
ENSSSCG00000017993
ENSG00000065320
Netrin-1 precursor
Tissue enriched
Detected in many
cartilage:
142.9
NTN4
ENSSSCG00000000896
ENSG00000074527
Netrin 4
Tissue enhanced
Detected in many
cartilage:
59.6
penis:
30.7
NTN5
ENSSSCG00000003146
ENSG00000142233
Netrin 5
Tissue enhanced
Detected in many
male glands:
37.7
NTNG1
ENSSSCG00000006852
ENSG00000162631
Netrin G1
Tissue enhanced
Detected in many
brain:
38.4
retina:
11.0
testis:
11.8
NTNG2
ENSSSCG00000005723
ENSG00000196358
Netrin G2
Tissue enhanced
Detected in many
brain:
20.3
lens:
22.6
retina:
62.4
NTRK1
ENSSSCG00000006464
ENSG00000198400
Neurotrophic receptor tyrosine kinase 1
Tissue enriched
Detected in all
adrenal gland:
37.7
NTRK3
ENSSSCG00000005106
ENSG00000140538
Neurotrophic receptor tyrosine kinase 3
Tissue enhanced
Detected in many
brain:
32.2
ovary:
35.6
NTS
ENSSSCG00000000932
ENSG00000133636
Neurotensin
Group enriched
Detected in some
brain:
39.6
pituitary gland:
46.5
NTSR1
ENSSSCG00000038278
ENSG00000101188
Neurotensin receptor 1
Group enriched
Detected in some
brain:
30.7
epididymis:
22.6
lymphoid tissue:
15.9
NTSR2
ENSSSCG00000008625
ENSG00000169006
Neurotensin receptor 2
Tissue enriched
Detected in some
brain:
20.1
NUDT19
ENSSSCG00000036294
ENSG00000213965
Nudix hydrolase 19
Low tissue specificity
Detected in all
NUMBL
ENSSSCG00000023228
ENSG00000105245
NUMB like, endocytic adaptor protein
Low tissue specificity
Detected in all
NUPR1
ENSSSCG00000040162
ENSG00000176046
Nuclear protein 1, transcriptional regulator
Tissue enhanced
Detected in many
kidney:
107.6
liver:
104.2
salivary gland:
176.4
NXN
ENSSSCG00000028720
ENSG00000167693
Nucleoredoxin
Tissue enhanced
Detected in all
lens:
89.9
NXPH1
ENSSSCG00000037207
ENSG00000122584
Neurexophilin 1
Tissue enriched
Detected in some
brain:
19.2
NXPH2
ENSSSCG00000040715
ENSG00000144227
Neurexophilin 2
Tissue enhanced
Detected in many
brain:
10.7
male glands:
16.3
salivary gland:
10.6
upper respiratory system:
9.4
NXPH3
ENSSSCG00000017552
ENSG00000182575
Neurexophilin 3
Group enriched
Detected in many
brain:
33.1
cervix:
29.4
NXPH4
ENSSSCG00000039966
ENSG00000182379
Neurexophilin 4
Tissue enhanced
Detected in some
adrenal gland:
9.4
brain:
19.3
pineal gland:
14.3
skin:
9.1
NYAP2
ENSSSCG00000016239
ENSG00000144460
Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2
Tissue enhanced
Detected in some
brain:
19.6
lens:
28.2
pineal gland:
19.3
retina:
18.4
NYNRIN
ENSSSCG00000032473
ENSG00000205978
NYN domain and retroviral integrase containing
Low tissue specificity
Detected in all
OAF
ENSSSCG00000036307
ENSG00000184232
Out at first homolog
Tissue enhanced
Detected in all
liver:
92.1
OCA2
ENSSSCG00000015854
ENSG00000104044
P protein
Tissue enhanced
Detected in some
brain:
11.7
choroid plexus:
26.8
kidney:
21.6
lens:
17.4
thyroid gland:
16.9
ODF3B
ENSSSCG00000000967
ENSG00000177989
Outer dense fiber protein 3B
Tissue enhanced
Detected in many
choroid plexus:
31.2
fallopian tube:
58.8
lung:
27.2
upper respiratory system:
52.3
OGDHL
ENSSSCG00000010394
ENSG00000197444
Oxoglutarate dehydrogenase like
Tissue enhanced
Detected in some
brain:
15.2
liver:
28.0
pineal gland:
12.1
pituitary gland:
11.6
retina:
12.1
OGN
ENSSSCG00000034607
ENSG00000106809
Mimecan precursor
Tissue enhanced
Detected in all
choroid plexus:
87.6
OLFM1
ENSSSCG00000029715
ENSG00000130558
Olfactomedin 1
Tissue enhanced
Detected in many
brain:
87.2
lens:
29.0
OLFM2
ENSSSCG00000027434
ENSG00000105088
Olfactomedin 2
Tissue enriched
Detected in all
ovary:
121.9
OLFM3
ENSSSCG00000006858
ENSG00000118733
Olfactomedin 3
Group enriched
Detected in some
brain:
33.3
ovary:
12.9
OLFML2A
ENSSSCG00000005593
ENSG00000185585
Olfactomedin-like protein 2A precursor
Tissue enhanced
Detected in all
salivary gland:
62.3
OLIG1
ENSSSCG00000012040
ENSG00000184221
Oligodendrocyte transcription factor 1
Tissue enriched
Detected in some
brain:
71.2
OLIG2
ENSSSCG00000012039
ENSG00000205927
Oligodendrocyte transcription factor 2
Tissue enriched
Detected in single
brain:
35.4
OMD
ENSSSCG00000008073
ENSG00000127083
Osteomodulin
Tissue enhanced
Detected in all
dura mater:
72.3
OMG
ENSSSCG00000017751
ENSG00000126861
Oligodendrocyte myelin glycoprotein
Tissue enriched
Detected in some
brain:
76.0
OPALIN
ENSSSCG00000010506
ENSG00000197430
Opalin
Tissue enriched
Detected in single
brain:
154.8
OPRD1
ENSSSCG00000027401
ENSG00000116329
Opioid receptor delta 1
Tissue enriched
Detected in some
thyroid gland:
34.7
OPRK1
ENSSSCG00000006264
ENSG00000082556
Opioid receptor kappa 1
Tissue enhanced
Detected in many
brain:
17.7
kidney:
16.8
pituitary gland:
15.5
OPRL1
ENSSSCG00000031228
ENSG00000125510
Nociceptin receptor
Tissue enhanced
Detected in many
adipose tissue:
20.5
aorta:
10.8
bone marrow:
10.0
brain:
15.0
OPRM1
ENSSSCG00000004074
ENSG00000112038
Mu-type opioid receptor
Tissue enriched
Detected in some
brain:
11.7
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