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Human disease related genes
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Keyword
Chromosome
1
2
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6
7
8
9
10
11
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
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Lymphoid tissue
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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4635 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
NKX6-2
ENSSSCG00000036098
ENSG00000148826
NK6 homeobox 2
Group enriched
Detected in some
brain:
27.0
stomach:
13.8
NMB
ENSSSCG00000036907
ENSG00000197696
Neuromedin-B precursor
Group enriched
Detected in many
brain:
36.5
endometrium:
35.2
NME5
ENSSSCG00000027997
ENSG00000112981
NME/NM23 family member 5
Tissue enhanced
Detected in many
choroid plexus:
23.6
fallopian tube:
22.8
pineal gland:
25.4
NME9
ENSSSCG00000037044
ENSG00000181322
NME/NM23 family member 9
Tissue enhanced
Detected in some
brain:
14.3
fallopian tube:
63.6
lung:
23.1
upper respiratory system:
22.5
NMI
ENSSSCG00000022011
ENSG00000123609
N-myc and STAT interactor
Low tissue specificity
Detected in many
NMNAT2
ENSSSCG00000015557
ENSG00000157064
Nicotinamide nucleotide adenylyltransferase 2
Tissue enhanced
Detected in many
brain:
44.6
pituitary gland:
18.1
NOCT
ENSSSCG00000024596
ENSG00000151014
Nocturnin
Low tissue specificity
Detected in all
NOG
ENSSSCG00000036437
ENSG00000183691
Noggin precursor
Tissue enhanced
Detected in many
brain:
23.0
NOS1
ENSSSCG00000009856
ENSG00000089250
Nitric oxide synthase 1
Tissue enhanced
Detected in many
brain:
19.2
choroid plexus:
34.3
fallopian tube:
16.4
skeletal muscle:
18.1
NOTCH2
ENSSSCG00000006709
ENSG00000134250
Notch 2
Low tissue specificity
Detected in all
NOV
ENSSSCG00000006002
ENSG00000136999
Nephroblastoma overexpressed
Tissue enhanced
Detected in many
dura mater:
78.5
penis:
103.9
NOVA2
ENSSSCG00000035029
ENSG00000104967
NOVA alternative splicing regulator 2
Tissue enhanced
Detected in many
brain:
25.8
NOX4
ENSSSCG00000014927
ENSG00000086991
NADPH oxidase 4
Tissue enhanced
Detected in many
kidney:
56.0
lens:
24.9
NPC1
ENSSSCG00000003707
ENSG00000141458
Niemann-Pick C1 protein precursor
Tissue enhanced
Detected in all
adrenal gland:
51.1
brain:
53.2
NPC2
ENSSSCG00000002366
ENSG00000119655
Epididymal secretory protein E1
Tissue enriched
Detected in many
epididymis:
615.2
NPEPL1
ENSSSCG00000007517
ENSG00000215440
Probable aminopeptidase NPEPL1
Low tissue specificity
Detected in many
NPFF
ENSSSCG00000000277
ENSG00000139574
Neuropeptide FF-amide peptide precursor
Tissue enhanced
Detected in all
brain:
56.3
NPFFR2
ENSSSCG00000008944
ENSG00000056291
Neuropeptide FF receptor 2
Tissue enhanced
Detected in some
brain:
7.6
cornea:
17.6
ovary:
9.0
NPHS2
ENSSSCG00000015526
ENSG00000116218
NPHS2, podocin
Tissue enriched
Detected in some
kidney:
69.5
NPL
ENSSSCG00000022292
ENSG00000135838
N-acetylneuraminate lyase
Tissue enhanced
Detected in many
lymphoid tissue:
26.3
skin:
27.8
NPM3
ENSSSCG00000010568
ENSG00000107833
Nucleophosmin/nucleoplasmin 3
Low tissue specificity
Detected in all
NPNT
ENSSSCG00000038801
ENSG00000168743
Nephronectin
Tissue enhanced
Detected in many
cornea:
52.6
thyroid gland:
41.8
NPPA
ENSSSCG00000003430
ENSG00000175206
Natriuretic peptides A precursor
Tissue enriched
Detected in some
heart:
932.9
NPPB
ENSSSCG00000003431
ENSG00000120937
Natriuretic peptides B Brain natriuretic peptide 32 Brain natriuretic peptide 26
Tissue enriched
Detected in some
heart:
105.4
NPPC
ENSSSCG00000026852
ENSG00000163273
C-type natriuretic peptide CNP-22 CNP-29 CNP-53
Tissue enriched
Detected in some
male glands:
300.0
NPR1
ENSSSCG00000006572
ENSG00000169418
Natriuretic peptide receptor 1
Tissue enhanced
Detected in many
adipose tissue:
45.7
aorta:
28.4
mesothelial tissue:
26.9
NPR3
ENSSSCG00000036201
ENSG00000113389
Natriuretic peptide receptor 3
Tissue enhanced
Detected in many
choroid plexus:
21.9
cornea:
33.2
lens:
39.8
NPS
ENSSSCG00000010751
ENSG00000214285
Neuropeptide S
Tissue enriched
Detected in single
brain:
13.1
NPSR1
ENSSSCG00000016664
ENSG00000187258
Neuropeptide S receptor 1
Low tissue specificity
Detected in many
NPTN
ENSSSCG00000001918
ENSG00000156642
Neuroplastin
Low tissue specificity
Detected in all
NPY
ENSSSCG00000016718
ENSG00000122585
Pro-neuropeptide Y precursor
Group enriched
Detected in some
brain:
47.5
lymphoid tissue:
17.8
NPY2R
ENSSSCG00000008993
ENSG00000185149
Neuropeptide Y receptor type 2
Tissue enhanced
Detected in many
brain:
15.1
cervix:
37.5
NPY5R
ENSSSCG00000008889
ENSG00000164129
Neuropeptide Y receptor type 5
Group enriched
Detected in some
brain:
10.6
ovary:
4.7
synovial tissue:
3.7
NR2E1
ENSSSCG00000004384
ENSG00000112333
Nuclear receptor subfamily 2 group E member 1
Tissue enhanced
Detected in some
brain:
16.2
choroid plexus:
9.7
lens:
29.7
retina:
9.6
NR2F1
ENSSSCG00000014157
ENSG00000175745
Nuclear receptor subfamily 2 group F member 1
Low tissue specificity
Detected in many
NR3C2
ENSSSCG00000037766
ENSG00000151623
Nuclear receptor subfamily 3 group C member 2
Low tissue specificity
Detected in all
NR4A1
ENSSSCG00000031321
ENSG00000123358
Nuclear receptor subfamily 4 group A member 1
Tissue enhanced
Detected in many
cartilage:
138.9
NR4A2
ENSSSCG00000015871
ENSG00000153234
Nuclear receptor subfamily 4 group A member 2
Tissue enhanced
Detected in many
cartilage:
110.4
male glands:
119.9
vagus nerve:
70.0
NR4A3
ENSSSCG00000005385
ENSG00000119508
Nuclear receptor subfamily 4 group A member 3
Tissue enhanced
Detected in many
heart:
83.4
male glands:
171.7
NRARP
ENSSSCG00000005844
ENSG00000198435
NOTCH regulated ankyrin repeat protein
Tissue enhanced
Detected in all
testis:
90.1
urinary bladder:
83.9
NRCAM
ENSSSCG00000015445
ENSG00000091129
Neuronal cell adhesion molecule
Group enriched
Detected in many
brain:
39.3
epididymis:
51.9
lens:
124.8
NRG2
ENSSSCG00000021082
ENSG00000158458
Neuregulin 2
Low tissue specificity
Detected in many
NRG4
ENSSSCG00000001860
ENSG00000169752
Neuregulin 4
Tissue enhanced
Detected in many
brain:
66.0
male glands:
67.5
NRGN
ENSSSCG00000039322
ENSG00000154146
Neurogranin
Tissue enriched
Detected in many
brain:
320.1
NRIP2
ENSSSCG00000000741
ENSG00000053702
Nuclear receptor interacting protein 2
Low tissue specificity
Detected in many
NRIP3
ENSSSCG00000014570
ENSG00000175352
Nuclear receptor interacting protein 3
Tissue enhanced
Detected in many
brain:
28.4
salivary gland:
14.1
NRK
ENSSSCG00000012546
ENSG00000123572
Nik related kinase
Tissue enhanced
Detected in some
brain:
11.4
cartilage:
51.2
kidney:
16.0
NRN1
ENSSSCG00000026211
ENSG00000124785
Neuritin precursor
Group enriched
Detected in some
brain:
38.2
retina:
10.5
NRP1
ENSSSCG00000011102
ENSG00000099250
Neuropilin 1
Tissue enhanced
Detected in many
adrenal gland:
79.8
NRP2
ENSSSCG00000026383
ENSG00000118257
Neuropilin 2
Tissue enhanced
Detected in many
smooth muscle:
71.2
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