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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
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322 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
LGALS12
ENSSSCG00000013056
ENSG00000133317
Galectin-12
Tissue enhanced
Detected in all
adipose tissue:
46.2
LHX6
ENSSSCG00000005530
ENSG00000106852
LIM homeobox 6
Tissue enhanced
Detected in many
cartilage:
32.4
LIPE
ENSSSCG00000003018
ENSG00000079435
Lipase E, hormone sensitive type
Tissue enhanced
Detected in many
adipose tissue:
157.0
aorta:
40.5
bone marrow:
57.2
LPIN1
ENSSSCG00000008624
ENSG00000134324
Phosphatidate phosphatase LPIN1
Tissue enhanced
Detected in all
adipose tissue:
75.1
LPL
ENSSSCG00000040631
ENSG00000175445
Lipoprotein lipase precursor
Tissue enhanced
Detected in many
adipose tissue:
134.0
aorta:
89.4
bone marrow:
101.4
LRRC17
ENSSSCG00000036452
ENSG00000128606
Leucine rich repeat containing 17
Tissue enhanced
Detected in many
heart:
29.1
male glands:
28.8
synovial tissue:
26.6
LRRC32
ENSSSCG00000014869
ENSG00000137507
Leucine rich repeat containing 32
Tissue enhanced
Detected in many
mesothelial tissue:
43.0
LRRC70
ENSSSCG00000037608
ENSG00000186105
Leucine rich repeat containing 70
Low tissue specificity
Detected in many
LVRN
ENSSSCG00000014221
ENSG00000172901
Laeverin
Tissue enhanced
Detected in many
cervix:
13.8
vagus nerve:
30.0
MC5R
ENSSSCG00000028411
ENSG00000176136
Melanocortin 5 receptor
Group enriched
Detected in some
adipose tissue:
13.2
aorta:
6.0
bone marrow:
9.6
epididymis:
4.7
skin:
6.1
MEOX1
ENSSSCG00000017376
ENSG00000005102
Mesenchyme homeobox 1
Tissue enhanced
Detected in many
mesothelial tissue:
38.0
MEOX2
ENSSSCG00000015357
ENSG00000106511
Homeobox protein MOX-2
Low tissue specificity
Detected in many
METTL7B
ENSSSCG00000036547
ENSG00000170439
Methyltransferase like 7B
Tissue enhanced
Detected in many
adipose tissue:
24.8
liver:
64.7
MLXIPL
ENSSSCG00000007710
ENSG00000009950
MLX interacting protein like
Tissue enhanced
Detected in many
adipose tissue:
74.7
liver:
76.6
MMP28
ENSSSCG00000034440
ENSG00000271447
Matrix metallopeptidase 28
Tissue enhanced
Detected in many
penis:
38.4
MMRN2
ENSSSCG00000024048
ENSG00000173269
Multimerin 2
Tissue enhanced
Detected in many
penis:
56.2
MYCT1
ENSSSCG00000031536
ENSG00000120279
MYC target 1
Low tissue specificity
Detected in many
MYOC
ENSSSCG00000035066
ENSG00000034971
Myocilin precursor
Tissue enhanced
Detected in many
adipose tissue:
25.0
aorta:
25.1
cartilage:
31.5
penis:
25.0
na
ENSSSCG00000000151
ENSG00000221963
Group enriched
Detected in many
adipose tissue:
50.3
aorta:
12.9
bone marrow:
17.5
na
ENSSSCG00000001725
ENSG00000069122
Tissue enhanced
Detected in many
adipose tissue:
60.7
na
ENSSSCG00000004207
Tissue enhanced
Detected in many
heart:
47.2
synovial tissue:
42.7
na
ENSSSCG00000005335
Tissue enhanced
Detected in some
brain:
2.7
na
ENSSSCG00000006286
ENSG00000007908
Tissue enhanced
Detected in many
cartilage:
44.6
dura mater:
17.2
na
ENSSSCG00000009285
ENSG00000205863,ENSG00000240654
Tissue enhanced
Detected in many
adipose tissue:
25.5
heart:
13.1
skeletal muscle:
14.0
na
ENSSSCG00000010497
ENSG00000138185
Ectonucleoside triphosphate diphosphohydrolase 1
Low tissue specificity
Detected in all
na
ENSSSCG00000010992
ENSG00000165269,ENSG00000259916
Aquaporin-7
Tissue enhanced
Detected in many
adipose tissue:
52.4
aorta:
24.8
bone marrow:
25.6
testis:
54.4
na
ENSSSCG00000013785
Tissue enhanced
Detected in many
aorta:
11.8
na
ENSSSCG00000014351
ENSG00000249751
Low tissue specificity
Detected in all
na
ENSSSCG00000015405
ENSG00000135218
Platelet glycoprotein 4
Tissue enhanced
Detected in many
adipose tissue:
146.7
aorta:
64.1
heart:
72.5
skeletal muscle:
63.1
na
ENSSSCG00000016548
ENSG00000128567
Low tissue specificity
Detected in all
na
ENSSSCG00000017383
ENSG00000131471
Tissue enriched
Detected in many
liver:
107.5
na
ENSSSCG00000023014
ENSG00000161649
Tissue enhanced
Detected in all
adipose tissue:
64.5
na
ENSSSCG00000023264
ENSG00000138413
Tissue enhanced
Detected in all
large intestine:
54.1
na
ENSSSCG00000027890
ENSG00000105808,ENSG00000170667
Low tissue specificity
Detected in many
na
ENSSSCG00000028341
ENSG00000204176,ENSG00000277758
Low tissue specificity
Detected in many
na
ENSSSCG00000028567
ENSG00000165810
Tissue enhanced
Detected in some
adipose tissue:
45.6
aorta:
19.3
bone marrow:
18.2
na
ENSSSCG00000030257
Tissue enhanced
Detected in many
adipose tissue:
6.2
na
ENSSSCG00000030537
Tissue enhanced
Detected in many
liver:
25.8
na
ENSSSCG00000030960
Tissue enriched
Detected in some
cartilage:
30.9
na
ENSSSCG00000031720
Tissue enhanced
Detected in many
adipose tissue:
14.0
heart:
14.8
na
ENSSSCG00000031861
Tissue enhanced
Detected in many
pineal gland:
28.5
pituitary gland:
21.0
na
ENSSSCG00000031889
ENSG00000258724
Low tissue specificity
Detected in many
na
ENSSSCG00000032591
Low tissue specificity
Detected in many
na
ENSSSCG00000032844
ENSG00000154263
Tissue enhanced
Detected in many
adipose tissue:
16.9
epididymis:
19.1
vagus nerve:
25.5
na
ENSSSCG00000033209
Low tissue specificity
Detected in many
na
ENSSSCG00000033363
Tissue enhanced
Detected in many
adipose tissue:
17.8
na
ENSSSCG00000033446
Tissue enhanced
Detected in some
adipose tissue:
3.3
na
ENSSSCG00000033662
Tissue enhanced
Detected in many
testis:
9.3
na
ENSSSCG00000034281
Tissue enriched
Detected in many
heart:
47.2
na
ENSSSCG00000034689
ENSG00000277494
Glycosylphosphatidylinositol-anchored high density lipoprotein-binding protein 1 precursor
Tissue enhanced
Detected in many
adipose tissue:
53.3
bone marrow:
22.4
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