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Human disease related genes
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Keyword
Chromosome
1
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7
8
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MT
Unmapped
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
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Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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322 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
FASN
ENSSSCG00000029944
ENSG00000169710
Fatty acid synthase
Tissue enhanced
Detected in all
adipose tissue:
297.2
aorta:
259.1
bone marrow:
111.4
FGD5
ENSSSCG00000011598
ENSG00000154783
FYVE, RhoGEF and PH domain containing 5
Low tissue specificity
Detected in many
FGF10
ENSSSCG00000016878
ENSG00000070193
Fibroblast growth factor 10
Tissue enhanced
Detected in many
adipose tissue:
19.1
cornea:
40.9
FGF16
ENSSSCG00000022833
ENSG00000196468
Fibroblast growth factor 16
Tissue enhanced
Detected in some
adipose tissue:
4.7
heart:
7.4
mesothelial tissue:
4.2
FHL5
ENSSSCG00000004340
ENSG00000112214
Four and a half LIM domains protein 5
Tissue enhanced
Detected in many
dura mater:
21.7
FILIP1
ENSSSCG00000004479
ENSG00000118407
Filamin A interacting protein 1
Tissue enhanced
Detected in many
skeletal muscle:
49.0
FLT1
ENSSSCG00000009320
ENSG00000102755
Fms related tyrosine kinase 1
Low tissue specificity
Detected in many
FMO1
ENSSSCG00000015268
ENSG00000010932
Dimethylaniline monooxygenase [N-oxide-forming] 1
Tissue enriched
Detected in many
liver:
195.8
FMO2
ENSSSCG00000015267
ENSG00000094963
Flavin containing monooxygenase 2
Tissue enhanced
Detected in many
adipose tissue:
44.7
dura mater:
53.5
lung:
37.0
upper respiratory system:
66.9
FRMD3
ENSSSCG00000010962
ENSG00000172159
FERM domain containing 3
Low tissue specificity
Detected in all
FZD4
ENSSSCG00000014920
ENSG00000174804
Frizzled class receptor 4
Tissue enhanced
Detected in all
adipose tissue:
65.0
GGT5
ENSSSCG00000010055
ENSG00000099998
Gamma-glutamyltransferase 5
Low tissue specificity
Detected in all
GHR
ENSSSCG00000016866
ENSG00000112964
Growth hormone receptor precursor
Tissue enhanced
Detected in many
adipose tissue:
57.2
bone marrow:
51.3
liver:
42.1
GIPC3
ENSSSCG00000036190
ENSG00000179855
GIPC PDZ domain containing family member 3
Tissue enhanced
Detected in many
lymphoid tissue:
24.7
GJA4
ENSSSCG00000039983
ENSG00000187513
Gap junction alpha-4 protein
Tissue enhanced
Detected in many
aorta:
31.8
mesothelial tissue:
39.2
GJA5
ENSSSCG00000006696
ENSG00000265107
Gap junction protein alpha 5
Low tissue specificity
Detected in many
GPAT4
ENSSSCG00000007019
ENSG00000158669
Glycerol-3-phosphate acyltransferase 6
Low tissue specificity
Detected in all
GPC3
ENSSSCG00000012680
ENSG00000147257
Glypican 3
Tissue enhanced
Detected in many
cornea:
55.3
liver:
32.8
GPR146
ENSSSCG00000032156
ENSG00000164849
G protein-coupled receptor 146
Low tissue specificity
Detected in all
GPR4
ENSSSCG00000037184
ENSG00000177464
G-protein coupled receptor 4
Tissue enhanced
Detected in many
mesothelial tissue:
38.0
GSC
ENSSSCG00000002490
ENSG00000133937
Goosecoid homeobox
Tissue enhanced
Detected in some
adipose tissue:
13.4
aorta:
8.0
mesothelial tissue:
14.0
mouth:
8.2
upper respiratory system:
14.1
GSC2
ENSSSCG00000010115
ENSG00000063515
Goosecoid homeobox 2
Low tissue specificity
Detected in many
HCAR1
ENSSSCG00000009789
ENSG00000196917
Hydroxycarboxylic acid receptor 1
Tissue enhanced
Detected in some
adipose tissue:
23.6
aorta:
7.2
bone marrow:
14.5
HES2
ENSSSCG00000034297
ENSG00000069812
Hes family bHLH transcription factor 2
Tissue enhanced
Detected in many
epididymis:
27.7
HEYL
ENSSSCG00000038956
ENSG00000163909
Hes related family bHLH transcription factor with YRPW motif-like
Low tissue specificity
Detected in many
HGF
ENSSSCG00000015403
ENSG00000019991
Hepatocyte growth factor
Tissue enhanced
Detected in many
liver:
19.6
HIGD1B
ENSSSCG00000017347
ENSG00000131097
HIG1 hypoxia inducible domain family member 1B
Low tissue specificity
Detected in many
HMCN1
ENSSSCG00000035595
ENSG00000143341
Hemicentin 1
Tissue enhanced
Detected in many
lymphoid tissue:
36.7
HS3ST6
ENSSSCG00000031216
ENSG00000162040
Heparan sulfate-glucosamine 3-sulfotransferase 6
Tissue enhanced
Detected in all
adipose tissue:
38.5
HSPA12B
ENSSSCG00000007147
ENSG00000132622
Heat shock protein family A (Hsp70) member 12B
Low tissue specificity
Detected in all
IL33
ENSSSCG00000005203
ENSG00000137033
Interleukin-33
Low tissue specificity
Detected in many
IL6
ENSSSCG00000020970
ENSG00000136244
Interleukin-6 precursor
Tissue enhanced
Detected in many
aorta:
19.9
dura mater:
15.0
mesothelial tissue:
31.4
INHBB
ENSSSCG00000038610
ENSG00000163083
Inhibin beta B chain precursor
Tissue enhanced
Detected in all
breast:
21.8
mesothelial tissue:
22.0
INPP1
ENSSSCG00000016050
ENSG00000151689
Inositol polyphosphate 1-phosphatase
Low tissue specificity
Detected in all
IRS2
ENSSSCG00000034763
ENSG00000185950
Insulin receptor substrate 2
Tissue enhanced
Detected in all
adipose tissue:
60.9
JAG2
ENSSSCG00000002555
ENSG00000184916
Jagged 2
Low tissue specificity
Detected in many
KANK3
ENSSSCG00000013598
ENSG00000186994
KN motif and ankyrin repeat domains 3
Tissue enhanced
Detected in many
penis:
34.9
KCNJ8
ENSSSCG00000000573
ENSG00000121361
Potassium voltage-gated channel subfamily J member 8
Tissue enhanced
Detected in many
heart:
30.4
KCNK17
ENSSSCG00000001592
ENSG00000124780
Potassium two pore domain channel subfamily K member 17
Tissue enhanced
Detected in some
adipose tissue:
3.5
cartilage:
5.8
KDR
ENSSSCG00000008844
ENSG00000128052
Kinase insert domain receptor
Low tissue specificity
Detected in many
KIAA0355
ENSSSCG00000002872
ENSG00000166398
KIAA0355
Low tissue specificity
Detected in all
KIF26A
ENSSSCG00000035093
ENSG00000066735
Kinesin family member 26A
Tissue enhanced
Detected in many
heart:
23.5
KITLG
ENSSSCG00000035495
ENSG00000049130
Kit ligand precursor
Low tissue specificity
Detected in many
KLB
ENSSSCG00000026297
ENSG00000134962
Klotho beta
Group enriched
Detected in many
adipose tissue:
28.2
aorta:
17.3
bone marrow:
22.8
liver:
16.8
mesothelial tissue:
8.1
KLF11
ENSSSCG00000038643
ENSG00000172059
Krueppel-like factor 11
Low tissue specificity
Detected in all
KLF2
ENSSSCG00000038911
ENSG00000127528
Krueppel-like factor 2
Tissue enhanced
Detected in many
synovial tissue:
136.0
KLRF1
ENSSSCG00000000655
ENSG00000150045
Killer cell lectin like receptor F1
Tissue enhanced
Detected in many
lung:
12.1
mesothelial tissue:
11.9
LAMA2
ENSSSCG00000033894
ENSG00000196569
Laminin subunit alpha 2
Tissue enhanced
Detected in many
heart:
52.7
synovial tissue:
48.0
LDB2
ENSSSCG00000029227
ENSG00000169744
LIM domain binding 2
Low tissue specificity
Detected in many
LEP
ENSSSCG00000040464
ENSG00000174697
Leptin precursor
Group enriched
Detected in some
adipose tissue:
22.8
aorta:
24.7
bone marrow:
23.7
testis:
14.5
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