We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
260 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 6 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000034597
ENSG00000206536
Low tissue specificity
Detected in some
na
ENSSSCG00000035016
Group enriched
Detected in many
stomach:
33.8
upper respiratory system:
32.4
na
ENSSSCG00000036254
Low tissue specificity
Detected in many
na
ENSSSCG00000037324
Tissue enriched
Detected in all
male glands:
104.1
na
ENSSSCG00000037570
Low tissue specificity
Detected in many
na
ENSSSCG00000038050
Low tissue specificity
Detected in many
na
ENSSSCG00000038506
Membrane cofactor protein precursor
Low tissue specificity
Detected in all
na
ENSSSCG00000040133
Low tissue specificity
Detected in many
NEDD4
ENSSSCG00000037499
ENSG00000069869
Neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
Low tissue specificity
Detected in all
NFATC1
ENSSSCG00000004856
ENSG00000131196
Nuclear factor of activated T-cells, cytoplasmic 1
Tissue enhanced
Detected in many
cartilage:
112.0
NFATC2
ENSSSCG00000007477
ENSG00000101096
Nuclear factor of activated T-cells, cytoplasmic 2
Tissue enhanced
Detected in many
cartilage:
117.5
NFE2L2
ENSSSCG00000015987
ENSG00000116044
Nuclear factor, erythroid 2 like 2
Low tissue specificity
Detected in all
NFKB1
ENSSSCG00000030957
ENSG00000109320
Nuclear factor NF-kappa-B p105 subunit
Low tissue specificity
Detected in all
NFKB2
ENSSSCG00000010580
ENSG00000077150
Nuclear factor kappa B subunit 2
Low tissue specificity
Detected in all
NFKBIA
ENSSSCG00000001952
ENSG00000100906
NF-kappa-B inhibitor alpha
Low tissue specificity
Detected in all
NFKBIZ
ENSSSCG00000011951
ENSG00000144802
NF-kappa-B inhibitor zeta
Low tissue specificity
Detected in many
NOTCH1
ENSSSCG00000038509
ENSG00000148400
Notch 1
Low tissue specificity
Detected in all
NR3C1
ENSSSCG00000014401
ENSG00000113580
Glucocorticoid receptor
Low tissue specificity
Detected in all
NRM
ENSSSCG00000023639
ENSG00000137404
Nurim
Tissue enriched
Detected in many
testis:
74.2
NUDT13
ENSSSCG00000025492
ENSG00000166321
Nudix hydrolase 13
Low tissue specificity
Detected in all
OSTF1
ENSSSCG00000005273
ENSG00000134996
Osteoclast-stimulating factor 1
Low tissue specificity
Detected in all
PABPN1L
ENSSSCG00000036367
ENSG00000205022
Poly(A) binding protein nuclear 1 like, cytoplasmic
Low tissue specificity
Detected in many
PARP3
ENSSSCG00000023033
ENSG00000041880
Poly(ADP-ribose) polymerase family member 3
Low tissue specificity
Detected in all
PELI1
ENSSSCG00000028947
ENSG00000197329
Pellino E3 ubiquitin protein ligase 1
Low tissue specificity
Detected in all
PHF11
ENSSSCG00000009396
ENSG00000136147
PHD finger protein 11
Low tissue specificity
Detected in all
PHF19
ENSSSCG00000005510
ENSG00000119403
PHD finger protein 19
Tissue enhanced
Detected in all
cartilage:
53.7
PIM1
ENSSSCG00000001573
ENSG00000137193
Pim-1 proto-oncogene, serine/threonine kinase
Low tissue specificity
Detected in all
PLAGL1
ENSSSCG00000004127
ENSG00000118495
Zinc finger protein PLAGL1
Low tissue specificity
Detected in all
PLCB3
ENSSSCG00000013034
ENSG00000149782
Phospholipase C beta 3
Tissue enhanced
Detected in many
small intestine:
63.0
PLCG1
ENSSSCG00000007356
ENSG00000124181
Phospholipase C gamma 1
Low tissue specificity
Detected in all
PLEKHG1
ENSSSCG00000032778
ENSG00000120278
Pleckstrin homology and RhoGEF domain containing G1
Tissue enhanced
Detected in all
epididymis:
44.9
PML
ENSSSCG00000001912
ENSG00000140464
Promyelocytic leukemia
Low tissue specificity
Detected in all
PPARG
ENSSSCG00000011579
ENSG00000132170
Peroxisome proliferator-activated receptor gamma
Tissue enhanced
Detected in many
adipose tissue:
52.9
aorta:
32.5
bone marrow:
41.6
large intestine:
29.5
lymphoid tissue:
33.8
PPP2R5A
ENSSSCG00000015599
ENSG00000066027
Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform
Low tissue specificity
Detected in all
PPRC1
ENSSSCG00000010575
ENSG00000148840
Peroxisome proliferator-activated receptor gamma, coactivator-related 1
Low tissue specificity
Detected in all
PRICKLE3
ENSSSCG00000012293
ENSG00000012211
Prickle planar cell polarity protein 3
Low tissue specificity
Detected in many
PRKD3
ENSSSCG00000008495
ENSG00000115825
Protein kinase D3
Low tissue specificity
Detected in all
PRPS2
ENSSSCG00000012116
ENSG00000101911
Ribose-phosphate pyrophosphokinase 2
Tissue enriched
Detected in all
male glands:
139.6
PTGES
ENSSSCG00000005688
ENSG00000148344
Prostaglandin E synthase
Tissue enriched
Detected in many
ovary:
139.1
RAB20
ENSSSCG00000022719
ENSG00000139832
RAB20, member RAS oncogene family
Tissue enhanced
Detected in many
heart:
26.5
RASSF1
ENSSSCG00000011407
ENSG00000068028
Ras association domain family member 1
Low tissue specificity
Detected in all
RFXANK
ENSSSCG00000036310
ENSG00000064490
DNA-binding protein RFXANK
Low tissue specificity
Detected in all
RHBDF2
ENSSSCG00000023362
ENSG00000129667
Rhomboid 5 homolog 2
Low tissue specificity
Detected in many
RIN3
ENSSSCG00000002451
ENSG00000100599
Ras and Rab interactor 3
Low tissue specificity
Detected in many
RIPK3
ENSSSCG00000001987
ENSG00000129465
Receptor interacting serine/threonine kinase 3
Low tissue specificity
Detected in many
RUNX1
ENSSSCG00000035537
ENSG00000159216
Runt-related transcription factor 1
Low tissue specificity
Detected in many
RXFP4
ENSSSCG00000006503
ENSG00000173080
Relaxin-3 receptor 2
Tissue enhanced
Detected in many
cartilage:
15.9
SAP30L
ENSSSCG00000033176
ENSG00000164576
SAP30 like
Low tissue specificity
Detected in all
SERINC2
ENSSSCG00000023585
ENSG00000168528
Serine incorporator 2 precursor
Tissue enhanced
Detected in many
kidney:
49.3
stomach:
57.8
SERTAD2
ENSSSCG00000037002
ENSG00000179833
SERTA domain containing 2
Low tissue specificity
Detected in all
« prev
| Page
of 6 |
next »
MENU
