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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
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Gene name
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Cancers
Cardiovascular diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
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18
MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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260 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
KIF13B
ENSSSCG00000009683
ENSG00000197892
Kinesin family member 13B
Low tissue specificity
Detected in all
KLF13
ENSSSCG00000026006
ENSG00000169926
Krueppel-like factor 13
Low tissue specificity
Detected in all
KSR1
ENSSSCG00000017753
ENSG00000141068
Kinase suppressor of ras 1
Low tissue specificity
Detected in all
LAMA3
ENSSSCG00000003709
ENSG00000053747
Laminin subunit alpha 3
Tissue enhanced
Detected in many
mesothelial tissue:
32.6
skin:
31.3
LBH
ENSSSCG00000040332
ENSG00000213626
Limb bud and heart development
Tissue enhanced
Detected in many
fallopian tube:
93.1
LIF
ENSSSCG00000040961
ENSG00000128342
Leukemia inhibitory factor precursor
Tissue enhanced
Detected in many
ovary:
35.1
stomach:
20.9
LMO2
ENSSSCG00000013307
ENSG00000135363
LIM domain only 2
Low tissue specificity
Detected in many
LRRC75A
ENSSSCG00000036776
ENSG00000181350
Leucine rich repeat containing 75A
Low tissue specificity
Detected in all
LRRK1
ENSSSCG00000004823
ENSG00000154237
Leucine rich repeat kinase 1
Low tissue specificity
Detected in all
LURAP1L
ENSSSCG00000036360
ENSG00000153714
Leucine rich adaptor protein 1 like
Low tissue specificity
Detected in many
LXN
ENSSSCG00000020984
ENSG00000079257
Latexin
Low tissue specificity
Detected in all
MAFB
ENSSSCG00000032251
ENSG00000204103
MAF bZIP transcription factor B
Tissue enhanced
Detected in many
lymphoid tissue:
125.0
synovial tissue:
119.6
MAML1
ENSSSCG00000014019
ENSG00000161021
Mastermind like transcriptional coactivator 1
Low tissue specificity
Detected in all
MAN1C1
ENSSSCG00000023235
ENSG00000117643
Mannosidase alpha class 1C member 1
Tissue enhanced
Detected in all
liver:
46.0
ovary:
66.6
MAP3K11
ENSSSCG00000037531
ENSG00000173327
Mitogen-activated protein kinase kinase kinase 11
Low tissue specificity
Detected in all
MAP3K2
ENSSSCG00000030354
ENSG00000169967
Mitogen-activated protein kinase kinase kinase 2
Low tissue specificity
Detected in all
MAP3K3
ENSSSCG00000024813
ENSG00000198909
Mitogen-activated protein kinase kinase kinase 3
Low tissue specificity
Detected in all
MAP3K8
ENSSSCG00000020705
ENSG00000107968
Mitogen-activated protein kinase kinase kinase 8
Low tissue specificity
Detected in all
MECOM
ENSSSCG00000011743
ENSG00000085276
MDS1 and EVI1 complex locus
Tissue enhanced
Detected in many
thyroid gland:
67.1
MIDN
ENSSSCG00000013432
ENSG00000167470
Midnolin
Low tissue specificity
Detected in all
MLKL
ENSSSCG00000002716
ENSG00000168404
Mixed lineage kinase domain like pseudokinase
Low tissue specificity
Detected in all
MOB3C
ENSSSCG00000003897
ENSG00000142961
MOB kinase activator 3C
Low tissue specificity
Detected in many
MTA2
ENSSSCG00000013062
ENSG00000149480
Metastasis associated 1 family member 2
Low tissue specificity
Detected in all
MVP
ENSSSCG00000027946
ENSG00000013364
Major vault protein
Low tissue specificity
Detected in all
MYC
ENSSSCG00000005965
ENSG00000136997
Myc proto-oncogene protein
Tissue enhanced
Detected in many
mesothelial tissue:
87.7
MYD88
ENSSSCG00000011251
ENSG00000172936
Myeloid differentiation primary response protein MyD88
Low tissue specificity
Detected in many
MYH9
ENSSSCG00000000145
ENSG00000100345
Myosin heavy chain 9
Low tissue specificity
Detected in all
MYO1D
ENSSSCG00000017728
ENSG00000176658
Myosin ID
Tissue enhanced
Detected in many
cartilage:
55.8
N4BP1
ENSSSCG00000002841
ENSG00000102921
NEDD4 binding protein 1
Low tissue specificity
Detected in all
na
ENSSSCG00000001394
Low tissue specificity
Detected in many
na
ENSSSCG00000002259
ENSG00000170776
Low tissue specificity
Detected in all
na
ENSSSCG00000002260
Low tissue specificity
Detected in all
na
ENSSSCG00000004572
Tissue enhanced
Detected in many
stomach:
27.1
upper respiratory system:
31.1
na
ENSSSCG00000008722
ENSG00000125089
Low tissue specificity
Detected in all
na
ENSSSCG00000011744
Tissue enhanced
Detected in many
stomach:
62.9
thyroid gland:
79.4
na
ENSSSCG00000012916
ENSG00000175482,ENSG00000256514
Low tissue specificity
Detected in all
na
ENSSSCG00000013421
Low tissue specificity
Detected in all
na
ENSSSCG00000015664
ENSG00000196352
Complement decay-accelerating factor precursor
Tissue enhanced
Detected in many
lymphoid tissue:
77.0
na
ENSSSCG00000016464
ENSG00000106144
Low tissue specificity
Detected in all
na
ENSSSCG00000016725
ENSG00000136205
Tissue enhanced
Detected in all
stomach:
70.9
na
ENSSSCG00000017920
ENSG00000161921
C-X-C motif chemokine 16 precursor
Tissue enhanced
Detected in many
mesothelial tissue:
82.8
na
ENSSSCG00000020913
Low tissue specificity
Detected in many
na
ENSSSCG00000023956
ENSG00000111859
Low tissue specificity
Detected in many
na
ENSSSCG00000024975
ENSG00000116833
Nuclear receptor subfamily 5 group A member 2
Group enriched
Detected in many
liver:
30.7
ovary:
91.3
na
ENSSSCG00000025527
Tissue enhanced
Detected in some
mesothelial tissue:
15.8
skin:
26.3
na
ENSSSCG00000027124
ENSG00000183160
Low tissue specificity
Detected in many
na
ENSSSCG00000027675
Low tissue specificity
Detected in all
na
ENSSSCG00000033023
Low tissue specificity
Detected in many
na
ENSSSCG00000033880
ENSG00000064201
Tissue enhanced
Detected in many
lymphoid tissue:
17.7
mesothelial tissue:
27.4
na
ENSSSCG00000033886
Tissue enhanced
Detected in some
penis:
2.6
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