We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
415 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 9 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
MINDY1
ENSSSCG00000006642
ENSG00000143409
MINDY lysine 48 deubiquitinase 1
Low tissue specificity
Detected in all
MMP2
ENSSSCG00000002829
ENSG00000087245
72 kDa type IV collagenase precursor
Tissue enhanced
Detected in all
cervix:
147.1
MPZ
ENSSSCG00000006352
ENSG00000158887
Myelin protein zero
Tissue enriched
Detected in some
vagus nerve:
678.4
MRC2
ENSSSCG00000017300
ENSG00000011028
Mannose receptor C type 2
Tissue enhanced
Detected in many
cartilage:
91.8
MRVI1
ENSSSCG00000020720
ENSG00000072952
Murine retrovirus integration site 1 homolog
Tissue enhanced
Detected in many
smooth muscle:
58.2
MSGN1
ENSSSCG00000026538
ENSG00000151379
Mesogenin 1
Tissue enriched
Detected in some
cartilage:
10.3
MSMP
ENSSSCG00000038905
ENSG00000215183
Microseminoprotein, prostate associated
Tissue enriched
Detected in some
cartilage:
372.9
MSRB3
ENSSSCG00000026004
ENSG00000174099
Methionine sulfoxide reductase B3
Tissue enhanced
Detected in many
smooth muscle:
70.8
MSX1
ENSSSCG00000008727
ENSG00000163132
Homeobox protein MSX-1
Tissue enhanced
Detected in many
choroid plexus:
36.0
endometrium:
42.5
penis:
30.6
MTUS1
ENSSSCG00000040013
ENSG00000129422
Microtubule associated scaffold protein 1
Low tissue specificity
Detected in all
MXRA7
ENSSSCG00000037376
ENSG00000182534
Matrix remodeling associated 7
Low tissue specificity
Detected in all
MXRA8
ENSSSCG00000021880
ENSG00000162576
Matrix remodeling associated 8
Low tissue specificity
Detected in all
MYL6
ENSSSCG00000039795
ENSG00000092841
Myosin light polypeptide 6
Tissue enhanced
Detected in all
smooth muscle:
405.0
na
ENSSSCG00000000107
ENSG00000213923,ENSG00000283900
Low tissue specificity
Detected in all
na
ENSSSCG00000000759
Tissue enriched
Detected in many
lens:
87.5
na
ENSSSCG00000002997
ENSG00000261857
Tissue enriched
Detected in some
cartilage:
161.2
na
ENSSSCG00000003554
ENSG00000162430
Low tissue specificity
Detected in all
na
ENSSSCG00000003747
ENSG00000150477
Low tissue specificity
Detected in all
na
ENSSSCG00000003768
ENSG00000162614
Tissue enhanced
Detected in many
heart:
61.0
skeletal muscle:
66.8
smooth muscle:
63.0
na
ENSSSCG00000004830
Tissue enhanced
Detected in many
adrenal gland:
33.3
na
ENSSSCG00000004854
ENSG00000104067
Tissue enhanced
Detected in all
lens:
182.7
na
ENSSSCG00000005278
Tissue enhanced
Detected in many
smooth muscle:
96.0
na
ENSSSCG00000007735
ENSG00000154710
Low tissue specificity
Detected in all
na
ENSSSCG00000009489
Tissue enriched
Detected in many
cartilage:
170.3
na
ENSSSCG00000010553
Tissue enhanced
Detected in some
cartilage:
1.5
na
ENSSSCG00000011966
Tissue enhanced
Detected in many
cartilage:
8.7
cornea:
5.9
na
ENSSSCG00000013318
ENSG00000049449,ENSG00000285283
Tissue enhanced
Detected in all
epididymis:
145.7
na
ENSSSCG00000014178
Tissue enhanced
Detected in many
cartilage:
15.0
na
ENSSSCG00000014575
Tissue enhanced
Detected in many
mesothelial tissue:
40.9
na
ENSSSCG00000022925
ENSG00000059804,ENSG00000173262
Low tissue specificity
Detected in all
na
ENSSSCG00000023127
ENSG00000168925,ENSG00000168928
Low tissue specificity
Detected in many
na
ENSSSCG00000023322
ENSG00000049089
Tissue enriched
Detected in many
cartilage:
148.3
na
ENSSSCG00000029251
ENSG00000047849
Low tissue specificity
Detected in all
na
ENSSSCG00000032663
Tissue enhanced
Detected in many
mesothelial tissue:
4.4
na
ENSSSCG00000033720
ENSG00000203485
Tissue enhanced
Detected in many
stomach:
65.5
na
ENSSSCG00000034104
Low tissue specificity
Detected in all
na
ENSSSCG00000034266
ENSG00000196557
Tissue enhanced
Detected in many
ductus deferens:
33.3
smooth muscle:
41.2
na
ENSSSCG00000034534
Tissue enhanced
Detected in some
breast:
4.7
cartilage:
15.9
skin:
7.4
na
ENSSSCG00000034702
Tissue enhanced
Detected in all
male glands:
31.0
na
ENSSSCG00000035371
Tissue enhanced
Detected in many
cartilage:
59.1
na
ENSSSCG00000036100
Tissue enhanced
Detected in many
cartilage:
48.7
na
ENSSSCG00000036490
Tissue enhanced
Detected in some
cartilage:
5.2
skin:
2.5
na
ENSSSCG00000036830
Tissue enhanced
Detected in many
mesothelial tissue:
33.3
na
ENSSSCG00000036838
Low tissue specificity
Detected in many
na
ENSSSCG00000037206
Tissue enhanced
Detected in many
lens:
37.9
smooth muscle:
66.8
na
ENSSSCG00000037298
Tissue enhanced
Detected in some
breast:
4.0
cartilage:
9.2
skin:
4.8
na
ENSSSCG00000037514
Tissue enhanced
Detected in many
cartilage:
20.1
na
ENSSSCG00000037922
Tissue enhanced
Detected in some
heart:
4.2
mesothelial tissue:
5.4
penis:
6.7
vagus nerve:
3.6
na
ENSSSCG00000038296
ENSG00000172985
Tissue enhanced
Detected in all
lymphoid tissue:
36.3
na
ENSSSCG00000039155
Tissue enriched
Detected in single
cartilage:
3.2
« prev
| Page
of 9 |
next »
MENU
