We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
415 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 9 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
GPR153
ENSSSCG00000003371
ENSG00000158292
G protein-coupled receptor 153
Low tissue specificity
Detected in many
GPX7
ENSSSCG00000038094
ENSG00000116157
Glutathione peroxidase 7
Low tissue specificity
Detected in many
GPX8
ENSSSCG00000021973
ENSG00000164294
Glutathione peroxidase 8 (putative)
Tissue enhanced
Detected in many
male glands:
42.8
ovary:
33.4
GYG2
ENSSSCG00000038044
ENSG00000056998
Glycogenin 2
Tissue enhanced
Detected in all
adipose tissue:
35.3
HAPLN3
ENSSSCG00000030597
ENSG00000140511
Hyaluronan and proteoglycan link protein 3
Tissue enhanced
Detected in all
cartilage:
62.0
liver:
34.6
ID2
ENSSSCG00000008645
ENSG00000115738
DNA-binding protein inhibitor ID-2
Tissue enhanced
Detected in many
cartilage:
124.2
IFT43
ENSSSCG00000002386
ENSG00000119650
Intraflagellar transport 43
Low tissue specificity
Detected in all
IGFBP6
ENSSSCG00000000261
ENSG00000167779
Insulin-like growth factor-binding protein 6 precursor
Tissue enhanced
Detected in many
cornea:
61.7
dura mater:
86.9
IKBIP
ENSSSCG00000038772
ENSG00000166130
Inhibitor of nuclear factor kappa-B kinase-interacting protein
Low tissue specificity
Detected in all
IKZF4
ENSSSCG00000031139
ENSG00000123411
IKAROS family zinc finger 4
Low tissue specificity
Detected in all
IL11
ENSSSCG00000040725
ENSG00000095752
Interleukin 11
Tissue enriched
Detected in some
ovary:
130.1
IL11RA
ENSSSCG00000010968
ENSG00000137070
Interleukin 11 receptor subunit alpha
Low tissue specificity
Detected in all
IL17D
ENSSSCG00000025308
ENSG00000172458
Interleukin 17D
Low tissue specificity
Detected in all
IL25
ENSSSCG00000028427
ENSG00000166090
Interleukin 25
Tissue enhanced
Detected in many
breast:
16.9
heart:
19.1
INHBA
ENSSSCG00000035077
ENSG00000122641
Inhibin beta A chain
Group enriched
Detected in many
cartilage:
119.6
ovary:
55.3
INVS
ENSSSCG00000005388
ENSG00000119509
Inversin
Low tissue specificity
Detected in all
IRF2BPL
ENSSSCG00000002392
ENSG00000119669
Interferon regulatory factor 2 binding protein like
Low tissue specificity
Detected in all
ISM1
ENSSSCG00000007073
ENSG00000101230
Isthmin 1
Tissue enhanced
Detected in many
cartilage:
84.7
ITGA10
ENSSSCG00000006687
ENSG00000143127
Integrin subunit alpha 10
Tissue enriched
Detected in all
cartilage:
55.2
ITGB1
ENSSSCG00000011101
ENSG00000150093
Integrin beta-1 precursor
Low tissue specificity
Detected in all
ITGB5
ENSSSCG00000037905
ENSG00000082781
Integrin beta-5 precursor
Low tissue specificity
Detected in all
ITGBL1
ENSSSCG00000009526
ENSG00000198542
Integrin subunit beta like 1
Tissue enhanced
Detected in many
aorta:
29.7
cornea:
42.0
dura mater:
31.8
vagus nerve:
32.9
JOSD1
ENSSSCG00000039555
ENSG00000100221
Josephin domain containing 1
Low tissue specificity
Detected in all
KANK4
ENSSSCG00000003821
ENSG00000132854
KN motif and ankyrin repeat domains 4
Tissue enriched
Detected in many
vagus nerve:
84.4
KCNQ4
ENSSSCG00000003975
ENSG00000117013
Potassium voltage-gated channel subfamily Q member 4
Tissue enhanced
Detected in many
skeletal muscle:
24.0
KCTD10
ENSSSCG00000009934
ENSG00000110906
Potassium channel tetramerization domain containing 10
Low tissue specificity
Detected in all
KDELC1
ENSSSCG00000009532
ENSG00000134901
KDEL motif containing 1
Low tissue specificity
Detected in all
KIAA1614
ENSSSCG00000015538
ENSG00000135835
KIAA1614
Low tissue specificity
Detected in many
KLHDC8B
ENSSSCG00000011379
ENSG00000185909
Kelch domain containing 8B
Low tissue specificity
Detected in all
LAMB2
ENSSSCG00000011377
ENSG00000172037
Laminin subunit beta 2
Low tissue specificity
Detected in all
LAMC1
ENSSSCG00000015555
ENSG00000135862
Laminin subunit gamma-1 precursor
Low tissue specificity
Detected in all
LETM2
ENSSSCG00000015816
ENSG00000165046
Leucine zipper and EF-hand containing transmembrane protein 2
Tissue enhanced
Detected in all
brain:
32.1
LGALS1
ENSSSCG00000033854
ENSG00000100097
Galectin-1
Low tissue specificity
Detected in all
LMX1A
ENSSSCG00000006329
ENSG00000162761
LIM homeobox transcription factor 1 alpha
Group enriched
Detected in many
choroid plexus:
56.9
pineal gland:
31.0
LOXL1
ENSSSCG00000001914
ENSG00000129038
Lysyl oxidase like 1
Tissue enhanced
Detected in all
choroid plexus:
55.0
LOXL3
ENSSSCG00000008266
ENSG00000115318
Lysyl oxidase like 3
Tissue enriched
Detected in many
cartilage:
82.9
LRP1
ENSSSCG00000000423
ENSG00000123384
LDL receptor related protein 1
Tissue enhanced
Detected in all
cartilage:
102.7
LRP6
ENSSSCG00000000625
ENSG00000070018
LDL receptor related protein 6
Low tissue specificity
Detected in all
LTBP3
ENSSSCG00000012985
ENSG00000168056
Latent transforming growth factor beta binding protein 3
Tissue enhanced
Detected in all
cartilage:
96.6
LZTS2
ENSSSCG00000021798
ENSG00000107816
Leucine zipper tumor suppressor 2
Low tissue specificity
Detected in all
MAP3K20
ENSSSCG00000015960
ENSG00000091436
Mitogen-activated protein kinase kinase kinase 20
Tissue enhanced
Detected in all
skeletal muscle:
78.1
MARCH3
ENSSSCG00000014249
ENSG00000173926
E3 ubiquitin-protein ligase MARCH3
Tissue enhanced
Detected in many
ovary:
31.7
MATN2
ENSSSCG00000006082
ENSG00000132561
Matrilin 2
Tissue enhanced
Detected in many
adipose tissue:
49.5
mesothelial tissue:
53.4
MATN3
ENSSSCG00000008603
ENSG00000132031
Matrilin 3
Tissue enriched
Detected in some
cartilage:
79.3
MDFI
ENSSSCG00000001620
ENSG00000112559
MyoD family inhibitor
Tissue enhanced
Detected in all
adrenal gland:
30.7
cartilage:
27.1
MEDAG
ENSSSCG00000009331
ENSG00000102802
Mesenteric estrogen dependent adipogenesis
Tissue enhanced
Detected in many
mesothelial tissue:
56.1
ovary:
35.8
synovial tissue:
51.9
MELTF
ENSSSCG00000011837
ENSG00000163975
Melanotransferrin
Group enriched
Detected in some
cartilage:
56.7
cervix:
15.2
testis:
18.7
METRNL
ENSSSCG00000017137
ENSG00000176845
Meteorin like, glial cell differentiation regulator
Tissue enhanced
Detected in many
cartilage:
67.1
MICAL3
ENSSSCG00000000770
ENSG00000243156
Microtubule associated monooxygenase, calponin and LIM domain containing 3
Tissue enhanced
Detected in all
cervix:
80.5
MID2
ENSSSCG00000012564
ENSG00000080561
Midline 2
Tissue enhanced
Detected in all
lens:
49.2
« prev
| Page
of 9 |
next »