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Gene name
Human disease related genes
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Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
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Gene name
Class
Cancers
Cardiovascular diseases
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Endocrine and metabolic diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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406 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000031132
ENSG00000184990
Low tissue specificity
Detected in all
na
ENSSSCG00000031140
Low tissue specificity
Detected in all
na
ENSSSCG00000031709
Low tissue specificity
Detected in all
na
ENSSSCG00000032067
Low tissue specificity
Detected in all
na
ENSSSCG00000032340
ENSG00000140743
Tissue enhanced
Detected in all
cartilage:
49.7
choroid plexus:
62.4
na
ENSSSCG00000032422
ENSG00000170379,ENSG00000283528
Low tissue specificity
Detected in many
na
ENSSSCG00000032870
Low tissue specificity
Detected in many
na
ENSSSCG00000032942
ENSG00000112977
Low tissue specificity
Detected in all
na
ENSSSCG00000033012
Low tissue specificity
Detected in many
na
ENSSSCG00000033218
Low tissue specificity
Detected in many
na
ENSSSCG00000033315
Low tissue specificity
Detected in many
na
ENSSSCG00000033423
Low tissue specificity
Detected in many
na
ENSSSCG00000034049
ENSG00000221926
Tissue enhanced
Detected in many
endometrium:
41.9
na
ENSSSCG00000034319
Low tissue specificity
Detected in all
na
ENSSSCG00000034917
Low tissue specificity
Detected in all
na
ENSSSCG00000035568
Low tissue specificity
Detected in all
na
ENSSSCG00000035658
ENSG00000136100
Low tissue specificity
Detected in all
na
ENSSSCG00000036148
Tissue enhanced
Detected in all
male glands:
47.5
na
ENSSSCG00000036305
ENSG00000235169
Tissue enhanced
Detected in many
choroid plexus:
28.2
heart:
24.7
male glands:
21.4
thyroid gland:
22.9
na
ENSSSCG00000036669
Tissue enhanced
Detected in many
lens:
97.6
na
ENSSSCG00000036820
Tissue enhanced
Detected in many
cartilage:
51.7
male glands:
74.8
na
ENSSSCG00000037142
Low tissue specificity
Detected in all
na
ENSSSCG00000037480
Tissue enhanced
Detected in many
choroid plexus:
48.1
na
ENSSSCG00000037530
Tissue enhanced
Detected in many
lens:
90.3
na
ENSSSCG00000037673
ENSG00000103429
Bifunctional apoptosis regulator
Low tissue specificity
Detected in all
na
ENSSSCG00000038014
Low tissue specificity
Detected in all
na
ENSSSCG00000038603
ENSG00000256537
Low tissue specificity
Detected in many
na
ENSSSCG00000038756
Low tissue specificity
Detected in many
na
ENSSSCG00000039071
ENSG00000213719
Tissue enhanced
Detected in many
male glands:
95.8
na
ENSSSCG00000039139
ENSG00000142208
RAC-alpha serine/threonine-protein kinase
Low tissue specificity
Detected in all
na
ENSSSCG00000040410
ENSG00000283632
Tissue enhanced
Detected in many
kidney:
16.1
thyroid gland:
17.9
na
ENSSSCG00000040565
Tissue enhanced
Detected in many
epididymis:
35.6
male glands:
27.9
mesothelial tissue:
20.9
thyroid gland:
18.6
na
ENSSSCG00000040748
Tissue enhanced
Detected in many
male glands:
25.3
NAT6
ENSSSCG00000011403
ENSG00000243477
N-acetyltransferase 6
Tissue enhanced
Detected in all
stomach:
67.9
NATD1
ENSSSCG00000033762
ENSG00000274180
N-acetyltransferase domain containing 1
Low tissue specificity
Detected in all
NECTIN2
ENSSSCG00000003090
ENSG00000130202
Nectin-2 precursor
Low tissue specificity
Detected in all
NET1
ENSSSCG00000023105
ENSG00000173848
Neuroepithelial cell transforming 1
Low tissue specificity
Detected in all
NHS
ENSSSCG00000012151
ENSG00000188158
NHS actin remodeling regulator
Tissue enhanced
Detected in all
lens:
30.7
NHSL1
ENSSSCG00000004149
ENSG00000135540
NHS like 1
Tissue enhanced
Detected in all
lens:
77.5
NKIRAS2
ENSSSCG00000017418
ENSG00000168256
NFKB inhibitor interacting Ras like 2
Low tissue specificity
Detected in all
NME3
ENSSSCG00000008017
ENSG00000103024
Nucleoside diphosphate kinase 3 isoform 2 precursor
Low tissue specificity
Detected in all
NOP53
ENSSSCG00000022774
ENSG00000105373
NOP53 ribosome biogenesis factor
Low tissue specificity
Detected in all
NPEPL1
ENSSSCG00000007517
ENSG00000215440
Probable aminopeptidase NPEPL1
Low tissue specificity
Detected in many
NR1H3
ENSSSCG00000013241
ENSG00000025434
Oxysterols receptor LXR-alpha
Tissue enhanced
Detected in all
lymphoid tissue:
98.0
NTAN1
ENSSSCG00000037398
ENSG00000157045
Protein N-terminal asparagine amidohydrolase
Low tissue specificity
Detected in all
NTN5
ENSSSCG00000003146
ENSG00000142233
Netrin 5
Tissue enhanced
Detected in many
male glands:
37.7
NUPR1
ENSSSCG00000040162
ENSG00000176046
Nuclear protein 1, transcriptional regulator
Tissue enhanced
Detected in many
kidney:
107.6
liver:
104.2
salivary gland:
176.4
OGFOD3
ENSSSCG00000032116
ENSG00000181396
2-oxoglutarate and iron dependent oxygenase domain containing 3
Low tissue specificity
Detected in all
OR51E2
ENSSSCG00000014764
ENSG00000167332
Olfactory receptor family 51 subfamily E member 2
Tissue enhanced
Detected in some
large intestine:
6.5
penis:
3.7
ORAI3
ENSSSCG00000007770
ENSG00000175938
ORAI calcium release-activated calcium modulator 3
Low tissue specificity
Detected in all
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