We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
544 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 11 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
RIC8A
ENSSSCG00000014557
ENSG00000177963
RIC8 guanine nucleotide exchange factor A
Low tissue specificity
Detected in all
RNF10
ENSSSCG00000009910
ENSG00000022840
Ring finger protein 10
Low tissue specificity
Detected in all
RNF126
ENSSSCG00000039551
ENSG00000070423
Ring finger protein 126
Low tissue specificity
Detected in all
RNF152
ENSSSCG00000004902
ENSG00000176641
E3 ubiquitin-protein ligase RNF152
Tissue enhanced
Detected in many
choroid plexus:
60.0
kidney:
102.9
RNF19B
ENSSSCG00000025206
ENSG00000116514
Ring finger protein 19B
Group enriched
Detected in all
lens:
104.6
testis:
74.8
RNF25
ENSSSCG00000016202
ENSG00000163481
Ring finger protein 25
Tissue enriched
Detected in all
testis:
63.8
RNH1
ENSSSCG00000032010
ENSG00000023191
Ribonuclease inhibitor
Low tissue specificity
Detected in all
RNPEP
ENSSSCG00000034151
ENSG00000176393
Arginyl aminopeptidase
Low tissue specificity
Detected in all
RNPS1
ENSSSCG00000008048
ENSG00000205937
RNA binding protein with serine rich domain 1
Low tissue specificity
Detected in all
RPH3AL
ENSSSCG00000036705
ENSG00000181031
Rabphilin 3A like (without C2 domains)
Low tissue specificity
Detected in all
RPL13
ENSSSCG00000024974
ENSG00000167526
60S ribosomal protein L13
Low tissue specificity
Detected in all
RRP12
ENSSSCG00000010514
ENSG00000052749
Ribosomal RNA processing 12 homolog
Low tissue specificity
Detected in all
RRP7A
ENSSSCG00000033983
ENSG00000189306
Ribosomal RNA processing 7 homolog A
Low tissue specificity
Detected in all
RRS1
ENSSSCG00000006214
ENSG00000179041
Ribosome biogenesis regulator homolog
Low tissue specificity
Detected in all
RSPO1
ENSSSCG00000032240
ENSG00000169218
R-spondin 1
Tissue enriched
Detected in some
lens:
98.7
RXRB
ENSSSCG00000001474
ENSG00000204231
Retinoic acid receptor RXR-beta
Low tissue specificity
Detected in all
S100A10
ENSSSCG00000006612
ENSG00000197747
Protein S100-A10
Tissue enhanced
Detected in all
lens:
193.0
S100A4
ENSSSCG00000006578
ENSG00000196154
Protein S100-A4
Tissue enriched
Detected in many
lens:
255.7
S100A6
ENSSSCG00000021084
ENSG00000197956
Protein S100-A6
Tissue enhanced
Detected in many
cornea:
159.7
lens:
261.3
SAP30BP
ENSSSCG00000017205
ENSG00000161526
SAP30 binding protein
Low tissue specificity
Detected in all
SAPCD1
ENSSSCG00000036076
ENSG00000228727
Suppressor APC domain containing 1
Tissue enriched
Detected in many
lens:
82.1
SCO1
ENSSSCG00000018008
ENSG00000133028
SCO1, cytochrome c oxidase assembly protein
Low tissue specificity
Detected in all
SCPEP1
ENSSSCG00000017617
ENSG00000121064
Serine carboxypeptidase 1
Low tissue specificity
Detected in all
SDF4
ENSSSCG00000003332
ENSG00000078808
Stromal cell derived factor 4
Low tissue specificity
Detected in all
SDK1
ENSSSCG00000007574
ENSG00000146555
Sidekick cell adhesion molecule 1
Tissue enhanced
Detected in many
lens:
57.1
SEC14L1
ENSSSCG00000017169
ENSG00000129657
SEC14 like lipid binding 1
Low tissue specificity
Detected in all
SEC24C
ENSSSCG00000010306
ENSG00000176986
SEC24 homolog C, COPII coat complex component
Low tissue specificity
Detected in all
SELENOP
ENSSSCG00000021208
ENSG00000250722
Selenoprotein P precursor
Tissue enhanced
Detected in all
liver:
184.0
ovary:
174.6
SEPT10
ENSSSCG00000023050
ENSG00000186522
Septin 10
Low tissue specificity
Detected in all
SF3A2
ENSSSCG00000039757
ENSG00000104897
Splicing factor 3a subunit 2
Low tissue specificity
Detected in all
SF3B2
ENSSSCG00000012957
ENSG00000087365
Splicing factor 3b subunit 2
Low tissue specificity
Detected in all
SFT2D3
ENSSSCG00000015860
ENSG00000173349
SFT2 domain containing 3
Low tissue specificity
Detected in all
SGK1
ENSSSCG00000021443
ENSG00000118515
Serine/threonine-protein kinase Sgk1
Tissue enhanced
Detected in all
choroid plexus:
79.9
SH3GL1
ENSSSCG00000013508
ENSG00000141985
SH3 domain containing GRB2 like 1, endophilin A2
Low tissue specificity
Detected in all
SH3KBP1
ENSSSCG00000012160
ENSG00000147010
SH3 domain containing kinase binding protein 1
Tissue enhanced
Detected in all
lymphoid tissue:
54.5
SHARPIN
ENSSSCG00000005914
ENSG00000179526
SHANK associated RH domain interactor
Low tissue specificity
Detected in all
SHROOM1
ENSSSCG00000014287
ENSG00000164403
Shroom family member 1
Low tissue specificity
Detected in all
SIAH2
ENSSSCG00000031388
ENSG00000181788
Siah E3 ubiquitin protein ligase 2
Low tissue specificity
Detected in all
SIMC1
ENSSSCG00000014062
ENSG00000170085
SUMO interacting motifs containing 1
Tissue enhanced
Detected in all
lens:
52.0
SLC10A3
ENSSSCG00000025766
ENSG00000126903
Solute carrier family 10 member 3
Low tissue specificity
Detected in all
SLC15A4
ENSSSCG00000025820
ENSG00000139370
Solute carrier family 15 member 4
Low tissue specificity
Detected in all
SLC25A28
ENSSSCG00000037536
ENSG00000155287
Solute carrier family 25 member 28
Low tissue specificity
Detected in all
SLC25A43
ENSSSCG00000012624
ENSG00000077713
Solute carrier family 25 member 43
Low tissue specificity
Detected in all
SLC39A1
ENSSSCG00000006561
ENSG00000143570
Solute carrier family 39 member 1
Low tissue specificity
Detected in all
SLC43A2
ENSSSCG00000024108
ENSG00000167703
Solute carrier family 43 member 2
Tissue enhanced
Detected in all
cartilage:
62.3
SMARCC1
ENSSSCG00000011340
ENSG00000173473
SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1
Low tissue specificity
Detected in all
SMCO4
ENSSSCG00000031295
ENSG00000166002
Single-pass membrane protein with coiled-coil domains 4
Tissue enhanced
Detected in many
lens:
126.6
male glands:
108.8
salivary gland:
83.3
SMIM3
ENSSSCG00000040151
ENSG00000256235
Small integral membrane protein 3
Low tissue specificity
Detected in all
SMIM5
ENSSSCG00000038844
ENSG00000204323
Small integral membrane protein 5
Tissue enhanced
Detected in many
cartilage:
53.1
salivary gland:
28.4
SNTB1
ENSSSCG00000005994
ENSG00000172164
Syntrophin beta 1
Tissue enhanced
Detected in many
choroid plexus:
68.3
lens:
77.2
« prev
| Page
of 11 |
next »
MENU
