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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
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Gene name
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Cancers
Cardiovascular diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
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5
6
7
8
9
10
11
12
13
14
15
16
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18
MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
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TISSUE SPECIFIC PROTEOME
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544 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000034610
ENSG00000149948
Tissue enhanced
Detected in all
testis:
20.7
na
ENSSSCG00000035304
ENSG00000101246
Low tissue specificity
Detected in all
na
ENSSSCG00000036712
Low tissue specificity
Detected in all
na
ENSSSCG00000037163
Low tissue specificity
Detected in all
na
ENSSSCG00000037372
ENSG00000112592
Low tissue specificity
Detected in all
na
ENSSSCG00000037445
ENSG00000109519
Low tissue specificity
Detected in all
na
ENSSSCG00000037605
ENSG00000164713
Low tissue specificity
Detected in all
na
ENSSSCG00000038501
Low tissue specificity
Detected in many
na
ENSSSCG00000039106
Tissue enhanced
Detected in many
male glands:
21.1
na
ENSSSCG00000039368
ENSG00000130958
UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter
Low tissue specificity
Detected in many
na
ENSSSCG00000039670
ENSG00000063245
Low tissue specificity
Detected in all
na
ENSSSCG00000040118
ENSG00000125534
Low tissue specificity
Detected in all
na
ENSSSCG00000040157
ENSG00000065000
Low tissue specificity
Detected in all
na
ENSSSCG00000040360
Low tissue specificity
Detected in all
na
ENSSSCG00000040538
ENSG00000139668
Low tissue specificity
Detected in all
NARF
ENSSSCG00000017126
ENSG00000141562
Nuclear prelamin A recognition factor
Tissue enhanced
Detected in all
lens:
86.9
NCAPH2
ENSSSCG00000000965
ENSG00000025770
Condensin-2 complex subunit H2
Low tissue specificity
Detected in all
NCBP2-AS2
ENSSSCG00000038542
ENSG00000270170
NCBP2 antisense RNA 2 (head to head)
Low tissue specificity
Detected in many
NCOA5
ENSSSCG00000007438
ENSG00000124160
Nuclear receptor coactivator 5
Low tissue specificity
Detected in all
NDOR1
ENSSSCG00000005859
ENSG00000188566
NADPH dependent diflavin oxidoreductase 1
Low tissue specificity
Detected in all
NECAP2
ENSSSCG00000003477
ENSG00000157191
NECAP endocytosis associated 2
Tissue enhanced
Detected in all
lens:
77.8
NEK7
ENSSSCG00000010904
ENSG00000151414
NIMA related kinase 7
Low tissue specificity
Detected in all
NEK9
ENSSSCG00000002381
ENSG00000119638
NIMA related kinase 9
Low tissue specificity
Detected in all
NELFCD
ENSSSCG00000007521
ENSG00000101158
Negative elongation factor D
Low tissue specificity
Detected in all
NELFE
ENSSSCG00000001423
ENSG00000204356
Negative elongation factor E
Low tissue specificity
Detected in all
NENF
ENSSSCG00000038614
ENSG00000117691
Neudesin neurotrophic factor
Low tissue specificity
Detected in all
NFE2L1
ENSSSCG00000017525
ENSG00000082641
Nuclear factor, erythroid 2 like 1
Low tissue specificity
Detected in all
NFKBIB
ENSSSCG00000026904
ENSG00000104825
NFKB inhibitor beta
Tissue enhanced
Detected in all
lens:
62.3
NFKBIL1
ENSSSCG00000001402
ENSG00000204498
NFKB inhibitor like 1
Low tissue specificity
Detected in all
NFYA
ENSSSCG00000001611
ENSG00000001167
Nuclear transcription factor Y subunit alpha
Low tissue specificity
Detected in all
NFYC
ENSSSCG00000003976
ENSG00000066136
Nuclear transcription factor Y subunit gamma
Low tissue specificity
Detected in all
NOB1
ENSSSCG00000002753
ENSG00000141101
NIN1/PSMD8 binding protein 1 homolog
Low tissue specificity
Detected in all
NOSIP
ENSSSCG00000029154
ENSG00000142546
Nitric oxide synthase interacting protein
Low tissue specificity
Detected in all
NOX4
ENSSSCG00000014927
ENSG00000086991
NADPH oxidase 4
Tissue enhanced
Detected in many
kidney:
56.0
lens:
24.9
NPLOC4
ENSSSCG00000024235
ENSG00000182446
NPL4 homolog, ubiquitin recognition factor
Low tissue specificity
Detected in all
NPRL3
ENSSSCG00000007981
ENSG00000103148
NPR3 like, GATOR1 complex subunit
Low tissue specificity
Detected in all
NR1H2
ENSSSCG00000003211
ENSG00000131408
Nuclear receptor subfamily 1 group H member 2
Low tissue specificity
Detected in all
NT5DC2
ENSSSCG00000011444
ENSG00000168268
5'-nucleotidase domain containing 2
Tissue enriched
Detected in all
lens:
131.7
NUB1
ENSSSCG00000016438
ENSG00000013374
Negative regulator of ubiquitin like proteins 1
Low tissue specificity
Detected in all
NUBP1
ENSSSCG00000024488
ENSG00000103274
Cytosolic Fe-S cluster assembly factor NUBP1
Tissue enhanced
Detected in all
heart:
57.5
NUCB1
ENSSSCG00000003150
ENSG00000104805
Nucleobindin-1 precursor
Low tissue specificity
Detected in all
NUDT1
ENSSSCG00000033926
ENSG00000106268
7,8-dihydro-8-oxoguanine triphosphatase
Low tissue specificity
Detected in all
NUDT17
ENSSSCG00000006690
ENSG00000186364
Nudix hydrolase 17
Low tissue specificity
Detected in all
NUP62
ENSSSCG00000040333
ENSG00000213024
Nucleoporin 62
Low tissue specificity
Detected in all
NXT1
ENSSSCG00000007119
ENSG00000132661
Nuclear transport factor 2 like export factor 1
Low tissue specificity
Detected in all
OGFR
ENSSSCG00000034216
ENSG00000060491
Opioid growth factor receptor
Low tissue specificity
Detected in all
ORAOV1
ENSSSCG00000012874
ENSG00000149716
Oral cancer overexpressed 1
Low tissue specificity
Detected in all
PACS1
ENSSSCG00000012956
ENSG00000175115
Phosphofurin acidic cluster sorting protein 1
Low tissue specificity
Detected in all
PALM2
ENSSSCG00000033120
ENSG00000157654,ENSG00000241978
A-kinase anchor protein 2
Tissue enriched
Detected in all
lens:
233.6
PBXIP1
ENSSSCG00000006540
ENSG00000163346
PBX homeobox interacting protein 1
Low tissue specificity
Detected in all
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