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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
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Gene name
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Cancers
Cardiovascular diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
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5
6
7
8
9
10
11
12
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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544 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
LAMP1
ENSSSCG00000009555
ENSG00000185896
Lysosome-associated membrane glycoprotein 1 precursor
Low tissue specificity
Detected in all
LAP3
ENSSSCG00000023604
ENSG00000002549
Leucine aminopeptidase 3
Tissue enhanced
Detected in all
lens:
115.7
LEPROT
ENSSSCG00000003806
ENSG00000213625
Leptin receptor gene-related protein
Low tissue specificity
Detected in all
LMF2
ENSSSCG00000000964
ENSG00000100258
Lipase maturation factor 2
Low tissue specificity
Detected in all
LRRC47
ENSSSCG00000039516
ENSG00000130764
Leucine rich repeat containing 47
Low tissue specificity
Detected in all
LSM14B
ENSSSCG00000026052
ENSG00000149657
LSM family member 14B
Low tissue specificity
Detected in all
LYPLA2
ENSSSCG00000023191
ENSG00000011009
Lysophospholipase II
Low tissue specificity
Detected in all
MAEA
ENSSSCG00000032304
ENSG00000090316
Macrophage erythroblast attacher
Low tissue specificity
Detected in all
MAGIX
ENSSSCG00000012295
ENSG00000269313
MAGI family member, X-linked
Low tissue specificity
Detected in all
MAMDC4
ENSSSCG00000005832
ENSG00000177943
MAM domain containing 4
Low tissue specificity
Detected in all
MAST2
ENSSSCG00000003913
ENSG00000086015
Microtubule associated serine/threonine kinase 2
Low tissue specificity
Detected in all
MAZ
ENSSSCG00000025321
ENSG00000103495
MYC associated zinc finger protein
Low tissue specificity
Detected in all
MBTPS1
ENSSSCG00000002682
ENSG00000140943
Membrane bound transcription factor peptidase, site 1
Low tissue specificity
Detected in all
MCOLN1
ENSSSCG00000013570
ENSG00000090674
Mucolipin 1
Low tissue specificity
Detected in all
MCRIP1
ENSSSCG00000039424
ENSG00000225663
MAPK regulated corepressor interacting protein 1
Low tissue specificity
Detected in all
MCUB
ENSSSCG00000009141
ENSG00000005059
Mitochondrial calcium uniporter dominant negative beta subunit
Tissue enhanced
Detected in all
lens:
76.8
MECP2
ENSSSCG00000034742
ENSG00000169057
Methyl-CpG binding protein 2
Low tissue specificity
Detected in all
MEPCE
ENSSSCG00000023680
ENSG00000146834
Methylphosphate capping enzyme
Low tissue specificity
Detected in all
METTL1
ENSSSCG00000025027
ENSG00000037897
Methyltransferase like 1
Tissue enhanced
Detected in all
testis:
42.6
METTL13
ENSSSCG00000015483
ENSG00000010165
Methyltransferase-like protein 13
Low tissue specificity
Detected in all
MEX3C
ENSSSCG00000034427
ENSG00000176624
Mex-3 RNA binding family member C
Tissue enhanced
Detected in all
testis:
57.0
MIER2
ENSSSCG00000014003
ENSG00000105556
MIER family member 2
Low tissue specificity
Detected in all
MIF4GD
ENSSSCG00000017209
ENSG00000125457
MIF4G domain containing
Low tissue specificity
Detected in all
MISP3
ENSSSCG00000013768
ENSG00000141854
Uncharacterized protein MISP3
Tissue enhanced
Detected in all
male glands:
55.7
MITF
ENSSSCG00000011514
ENSG00000187098
Sus scrofa microphthalmia-associated transcription factor-like (LOC102167244), mRNA.
Tissue enhanced
Detected in all
cervix:
72.5
MLX
ENSSSCG00000017397
ENSG00000108788
MLX, MAX dimerization protein
Low tissue specificity
Detected in all
MMS19
ENSSSCG00000010520
ENSG00000155229
MMS19 homolog, cytosolic iron-sulfur assembly component
Low tissue specificity
Detected in all
MOB2
ENSSSCG00000037847
ENSG00000182208
MOB kinase activator 2
Low tissue specificity
Detected in all
MOB3A
ENSSSCG00000032366
ENSG00000172081
MOB kinase activator 3A
Low tissue specificity
Detected in all
MPG
ENSSSCG00000007982
ENSG00000103152
N-methylpurine DNA glycosylase
Low tissue specificity
Detected in all
MPP1
ENSSSCG00000012822
ENSG00000130830
Membrane palmitoylated protein 1
Tissue enhanced
Detected in all
small intestine:
55.3
MPRIP
ENSSSCG00000036812
ENSG00000133030
Myosin phosphatase Rho interacting protein
Low tissue specificity
Detected in all
MPZL1
ENSSSCG00000006306
ENSG00000197965
Myelin protein zero like 1
Low tissue specificity
Detected in all
MRM3
ENSSSCG00000017806
ENSG00000171861
Mitochondrial rRNA methyltransferase 3
Low tissue specificity
Detected in all
MRPL21
ENSSSCG00000012879
ENSG00000197345
Mitochondrial ribosomal protein L21
Low tissue specificity
Detected in all
MRPS2
ENSSSCG00000005759
ENSG00000122140
Mitochondrial ribosomal protein S2
Low tissue specificity
Detected in all
MRPS34
ENSSSCG00000008016
ENSG00000074071
28S ribosomal protein S34, mitochondrial
Low tissue specificity
Detected in all
MSRB1
ENSSSCG00000032932
ENSG00000198736
Methionine-R-sulfoxide reductase B1
Low tissue specificity
Detected in all
MTA1
ENSSSCG00000032544
ENSG00000182979
Metastasis associated 1
Low tissue specificity
Detected in all
MTMR14
ENSSSCG00000011546
ENSG00000163719
Myotubularin related protein 14
Low tissue specificity
Detected in all
MTR
ENSSSCG00000010143
ENSG00000116984
5-methyltetrahydrofolate-homocysteine methyltransferase
Low tissue specificity
Detected in all
na
ENSSSCG00000001010
ENSG00000124535
Low tissue specificity
Detected in all
na
ENSSSCG00000001517
Tissue enhanced
Detected in many
testis:
39.4
na
ENSSSCG00000001850
ENSG00000242498,ENSG00000250021
Arpin
Low tissue specificity
Detected in all
na
ENSSSCG00000002348
ENSG00000205669
Low tissue specificity
Detected in many
na
ENSSSCG00000002746
ENSG00000102967
Tissue enhanced
Detected in all
liver:
38.3
na
ENSSSCG00000002953
Low tissue specificity
Detected in all
na
ENSSSCG00000003136
ENSG00000105443
Cytohesin-2
Low tissue specificity
Detected in all
na
ENSSSCG00000004150
ENSG00000051620
Tissue enhanced
Detected in all
male glands:
38.3
na
ENSSSCG00000005658
Tissue enhanced
Detected in all
testis:
74.1
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