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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
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Other congenital disorders
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
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6
7
8
9
10
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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544 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
GDI2
ENSSSCG00000011137
ENSG00000057608
Rab GDP dissociation inhibitor beta
Low tissue specificity
Detected in all
GEMIN4
ENSSSCG00000017809
ENSG00000179409
Gem nuclear organelle associated protein 4
Tissue enhanced
Detected in all
testis:
57.3
GGA1
ENSSSCG00000024895
ENSG00000100083
Golgi associated, gamma adaptin ear containing, ARF binding protein 1
Low tissue specificity
Detected in all
GGA2
ENSSSCG00000010798
ENSG00000103365
Golgi associated, gamma adaptin ear containing, ARF binding protein 2
Low tissue specificity
Detected in all
GID4
ENSSSCG00000037336
ENSG00000141034
GID complex subunit 4 homolog
Low tissue specificity
Detected in all
GID8
ENSSSCG00000034173
ENSG00000101193
GID complex subunit 8 homolog
Low tissue specificity
Detected in all
GLB1
ENSSSCG00000024119
ENSG00000170266
Galactosidase beta 1
Tissue enhanced
Detected in all
male glands:
56.2
GLIS3
ENSSSCG00000005224
ENSG00000107249
GLIS family zinc finger 3
Tissue enhanced
Detected in many
male glands:
75.0
GOLGA3
ENSSSCG00000009733
ENSG00000090615
Golgin A3
Low tissue specificity
Detected in all
GPAA1
ENSSSCG00000005912
ENSG00000197858
Glycosylphosphatidylinositol anchor attachment 1
Low tissue specificity
Detected in all
GPANK1
ENSSSCG00000001413
ENSG00000204438
G patch domain and ankyrin repeat-containing protein 1
Low tissue specificity
Detected in all
GPS1
ENSSSCG00000033689
ENSG00000169727
G protein pathway suppressor 1
Low tissue specificity
Detected in all
GPX1
ENSSSCG00000033727
Glutathione peroxidase 1
Low tissue specificity
Detected in all
GRIN3B
ENSSSCG00000029635
ENSG00000116032
Glutamate ionotropic receptor NMDA type subunit 3B
Tissue enhanced
Detected in many
brain:
11.6
lens:
12.2
GRK6
ENSSSCG00000035028
ENSG00000198055
G protein-coupled receptor kinase 6
Tissue enriched
Detected in all
lens:
136.1
GRPEL2
ENSSSCG00000014432
ENSG00000164284
GrpE protein homolog 2, mitochondrial
Low tissue specificity
Detected in all
GRWD1
ENSSSCG00000003134
ENSG00000105447
Glutamate rich WD repeat containing 1
Low tissue specificity
Detected in all
GTPBP4
ENSSSCG00000028602
ENSG00000107937
GTP binding protein 4
Low tissue specificity
Detected in all
GYS1
ENSSSCG00000003154
ENSG00000104812
Glycogen
Tissue enhanced
Detected in all
skeletal muscle:
87.8
GZF1
ENSSSCG00000007117
ENSG00000125812
GDNF inducible zinc finger protein 1
Low tissue specificity
Detected in all
H1F0
ENSSSCG00000039348
ENSG00000189060
H1 histone family member 0
Low tissue specificity
Detected in all
HADH
ENSSSCG00000009150
ENSG00000138796
Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial
Low tissue specificity
Detected in all
HBP1
ENSSSCG00000035673
ENSG00000105856
HMG box-containing protein 1
Low tissue specificity
Detected in all
HDGFL2
ENSSSCG00000013511
ENSG00000167674
HDGF like 2
Low tissue specificity
Detected in all
HEXIM2
ENSSSCG00000017335
ENSG00000168517
Hexamethylene bisacetamide inducible 2
Low tissue specificity
Detected in all
HGH1
ENSSSCG00000026590
ENSG00000235173
HGH1 homolog
Low tissue specificity
Detected in all
HIF3A
ENSSSCG00000003101
ENSG00000124440
Hypoxia inducible factor 3 alpha subunit
Tissue enhanced
Detected in many
breast:
38.6
heart:
44.0
HK2
ENSSSCG00000008261
ENSG00000159399
Hexokinase-2
Low tissue specificity
Detected in many
HM13
ENSSSCG00000007228
ENSG00000101294
Histocompatibility minor 13
Tissue enhanced
Detected in all
male glands:
53.1
HSF1
ENSSSCG00000005917
ENSG00000185122
Heat shock factor protein 1
Low tissue specificity
Detected in all
HYI
ENSSSCG00000003940
ENSG00000178922
Hydroxypyruvate isomerase (putative)
Tissue enhanced
Detected in all
liver:
74.3
IAH1
ENSSSCG00000008640
ENSG00000134330
Isoamyl acetate hydrolyzing esterase 1 (putative)
Low tissue specificity
Detected in all
IDUA
ENSSSCG00000032262
ENSG00000127415
Iduronidase, alpha-L-
Low tissue specificity
Detected in all
ILK
ENSSSCG00000023272
ENSG00000166333
Integrin linked kinase
Low tissue specificity
Detected in all
INPP5A
ENSSSCG00000010765
ENSG00000068383
Inositol polyphosphate-5-phosphatase A
Low tissue specificity
Detected in all
INPP5E
ENSSSCG00000040869
ENSG00000148384
Inositol polyphosphate-5-phosphatase E
Low tissue specificity
Detected in all
INSR
ENSSSCG00000013566
ENSG00000171105
Insulin receptor
Low tissue specificity
Detected in all
INTS3
ENSSSCG00000006571
ENSG00000143624
Integrator complex subunit 3
Low tissue specificity
Detected in all
IRS1
ENSSSCG00000025729
ENSG00000169047
Insulin receptor substrate 1
Tissue enhanced
Detected in all
skeletal muscle:
58.0
ISG20L2
ENSSSCG00000006471
ENSG00000143319
Interferon stimulated exonuclease gene 20 like 2
Tissue enriched
Detected in all
testis:
88.7
ITGA6
ENSSSCG00000015955
ENSG00000091409
Integrin subunit alpha 6
Low tissue specificity
Detected in all
JADE3
ENSSSCG00000012267
ENSG00000102221
Jade family PHD finger 3
Low tissue specificity
Detected in all
JRK
ENSSSCG00000037975
ENSG00000234616
Jrk helix-turn-helix protein
Low tissue specificity
Detected in all
KCTD9
ENSSSCG00000009652
ENSG00000104756
Potassium channel tetramerization domain containing 9
Low tissue specificity
Detected in all
KDELR1
ENSSSCG00000003132
ENSG00000105438
KDEL endoplasmic reticulum protein retention receptor 1
Low tissue specificity
Detected in all
KDELR3
ENSSSCG00000000105
ENSG00000100196
ER lumen protein-retaining receptor 3
Tissue enhanced
Detected in many
male glands:
100.4
KHSRP
ENSSSCG00000013538
ENSG00000088247
KH-type splicing regulatory protein
Low tissue specificity
Detected in all
KLF15
ENSSSCG00000036742
ENSG00000163884
Krueppel-like factor 15
Tissue enhanced
Detected in all
liver:
54.8
KLHL21
ENSSSCG00000003379
ENSG00000162413
Kelch like family member 21
Low tissue specificity
Detected in all
KLHL36
ENSSSCG00000038285
ENSG00000135686
Kelch like family member 36
Low tissue specificity
Detected in all
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