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Chromosome
1
2
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7
8
9
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MT
Unmapped
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
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Male glands
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Mouth
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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TISSUE SPECIFIC PROTEOME
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400 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
RPS3
ENSSSCG00000014855
ENSG00000149273
40S ribosomal protein S3
Low tissue specificity
Detected in all
RPS3A
ENSSSCG00000009019
ENSG00000145425
40S ribosomal protein S3a
Tissue enhanced
Detected in all
male glands:
308.4
RPS4X
ENSSSCG00000012405
ENSG00000198034
40S ribosomal protein S4, X isoform
Low tissue specificity
Detected in all
RPS5
ENSSSCG00000004002
ENSG00000083845
Ribosomal protein S5
Low tissue specificity
Detected in all
RPS6KA3
ENSSSCG00000012163
ENSG00000177189
Ribosomal protein S6 kinase A3
Tissue enhanced
Detected in all
male glands:
66.0
RPS9
ENSSSCG00000029785
ENSG00000170889
Ribosomal protein S9
Low tissue specificity
Detected in all
RPSA
ENSSSCG00000037236
40S ribosomal protein SA
Low tissue specificity
Detected in all
RPUSD2
ENSSSCG00000036700
ENSG00000166133
RNA pseudouridylate synthase domain containing 2
Low tissue specificity
Detected in all
RWDD4
ENSSSCG00000015776
ENSG00000182552
RWD domain containing 4
Low tissue specificity
Detected in all
SAV1
ENSSSCG00000005021
ENSG00000151748
Salvador family WW domain containing protein 1
Low tissue specificity
Detected in all
SCAMP2
ENSSSCG00000001892
ENSG00000140497
Secretory carrier-associated membrane protein 2
Low tissue specificity
Detected in all
SDC2
ENSSSCG00000006088
ENSG00000169439
Syndecan-2 precursor
Tissue enhanced
Detected in all
cornea:
91.0
liver:
65.9
SDF2L1
ENSSSCG00000010085
ENSG00000128228
Stromal cell derived factor 2 like 1
Tissue enhanced
Detected in many
epididymis:
45.6
male glands:
20.4
SEC11A
ENSSSCG00000029183
ENSG00000140612
SEC11 homolog A, signal peptidase complex subunit
Low tissue specificity
Detected in all
SEC13
ENSSSCG00000011572
ENSG00000157020
SEC13 homolog, nuclear pore and COPII coat complex component
Low tissue specificity
Detected in all
SEC24A
ENSSSCG00000014304
ENSG00000113615
Protein transport protein Sec24A
Tissue enhanced
Detected in all
male glands:
76.8
SEC61A1
ENSSSCG00000011621
ENSG00000058262
Protein transport protein Sec61 subunit alpha
Low tissue specificity
Detected in all
SEC61B
ENSSSCG00000038914
ENSG00000106803
Protein transport protein Sec61 subunit beta
Tissue enhanced
Detected in all
male glands:
129.3
SELENOS
ENSSSCG00000004826
ENSG00000131871
Selenoprotein S
Tissue enhanced
Detected in all
male glands:
79.1
SERP1
ENSSSCG00000037465
ENSG00000120742
Stress-associated endoplasmic reticulum protein 1
Tissue enhanced
Detected in all
male glands:
103.7
salivary gland:
71.0
SERPINB1
ENSSSCG00000001011
ENSG00000021355
Serpin family B member 1
Tissue enriched
Detected in many
lens:
240.5
SERPINB6
ENSSSCG00000038404
ENSG00000124570
Serpin family B member 6
Group enriched
Detected in all
lens:
176.6
male glands:
47.4
SFT2D2
ENSSSCG00000031617
ENSG00000213064
Vesicle transport protein SFT2B
Tissue enhanced
Detected in all
lens:
45.3
SGPL1
ENSSSCG00000010274
ENSG00000166224
Sphingosine-1-phosphate lyase 1
Low tissue specificity
Detected in all
SH3GLB1
ENSSSCG00000006930
ENSG00000097033
Endophilin-B1
Low tissue specificity
Detected in all
SIGMAR1
ENSSSCG00000037000
ENSG00000147955
Sigma non-opioid intracellular receptor 1
Tissue enhanced
Detected in all
liver:
77.8
SLAIN2
ENSSSCG00000008821
ENSG00000109171
SLAIN motif family member 2
Low tissue specificity
Detected in all
SLC25A1
ENSSSCG00000010116
ENSG00000100075
Tricarboxylate transport protein, mitochondrial
Low tissue specificity
Detected in all
SLC25A6
ENSSSCG00000033673
ENSG00000169100
ADP/ATP translocase 3
Low tissue specificity
Detected in all
SLC30A7
ENSSSCG00000006860
ENSG00000162695
Zinc transporter 7
Tissue enhanced
Detected in all
male glands:
48.2
SLC35A2
ENSSSCG00000024841
ENSG00000102100
Solute carrier family 35 member A2
Low tissue specificity
Detected in all
SLC35A4
ENSSSCG00000014367
ENSG00000176087
Probable UDP-sugar transporter protein SLC35A4
Low tissue specificity
Detected in all
SLC35B2
ENSSSCG00000001702
ENSG00000157593
Solute carrier family 35 member B2
Tissue enhanced
Detected in all
male glands:
37.0
SLC35F5
ENSSSCG00000015709
ENSG00000115084
Solute carrier family 35 member F5
Tissue enhanced
Detected in all
male glands:
50.8
SLC38A6
ENSSSCG00000005092
ENSG00000139974
Probable sodium-coupled neutral amino acid transporter 6
Low tissue specificity
Detected in all
SMNDC1
ENSSSCG00000030507
ENSG00000119953
Survival of motor neuron-related-splicing factor 30
Low tissue specificity
Detected in all
SMURF2
ENSSSCG00000032176
ENSG00000108854
SMAD specific E3 ubiquitin protein ligase 2
Low tissue specificity
Detected in all
SNAP23
ENSSSCG00000038735
ENSG00000092531
Synaptosomal-associated protein 23
Low tissue specificity
Detected in all
SNRNP200
ENSSSCG00000008127
ENSG00000144028
Small nuclear ribonucleoprotein U5 subunit 200
Low tissue specificity
Detected in all
SNRPD2
ENSSSCG00000033500
ENSG00000125743
Small nuclear ribonucleoprotein Sm D2
Low tissue specificity
Detected in all
SNX2
ENSSSCG00000022790
ENSG00000205302
Sorting nexin 2
Low tissue specificity
Detected in all
SPTY2D1
ENSSSCG00000013361
ENSG00000179119
SPT2 chromatin protein domain containing 1
Tissue enriched
Detected in all
male glands:
56.6
SQSTM1
ENSSSCG00000014016
ENSG00000161011
Sequestosome 1
Low tissue specificity
Detected in all
SRPRA
ENSSSCG00000015227
ENSG00000182934
SRP receptor alpha subunit
Tissue enhanced
Detected in all
male glands:
121.3
SRSF9
ENSSSCG00000009906
ENSG00000111786
Serine/arginine-rich splicing factor 9
Low tissue specificity
Detected in all
SSR1
ENSSSCG00000001022
ENSG00000124783
Signal sequence receptor, alpha
Low tissue specificity
Detected in all
SSR2
ENSSSCG00000006501
ENSG00000163479
Signal sequence receptor subunit 2
Low tissue specificity
Detected in all
SSR4
ENSSSCG00000012784
ENSG00000180879
Signal sequence receptor subunit 4
Tissue enhanced
Detected in all
male glands:
127.4
SSRP1
ENSSSCG00000029059
ENSG00000149136
Structure specific recognition protein 1
Low tissue specificity
Detected in all
STAU1
ENSSSCG00000027444
ENSG00000124214
Staufen double-stranded RNA binding protein 1
Low tissue specificity
Detected in all
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