We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
2285 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 46 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
RPRD1B
ENSSSCG00000007342
ENSG00000101413
Regulation of nuclear pre-mRNA domain containing 1B
Low tissue specificity
Detected in all
RPRD2
ENSSSCG00000030291
ENSG00000163125
Regulation of nuclear pre-mRNA domain containing 2
Low tissue specificity
Detected in all
RPS19BP1
ENSSSCG00000000083
ENSG00000187051
Ribosomal protein S19 binding protein 1
Low tissue specificity
Detected in all
RPS6KB1
ENSSSCG00000017670
ENSG00000108443
Ribosomal protein S6 kinase B1
Low tissue specificity
Detected in all
RPS6KB2
ENSSSCG00000012910
ENSG00000175634
Ribosomal protein S6 kinase B2
Low tissue specificity
Detected in all
RPTOR
ENSSSCG00000017139
ENSG00000141564
Regulatory associated protein of MTOR complex 1
Low tissue specificity
Detected in all
RPUSD1
ENSSSCG00000008000
ENSG00000007376
RNA pseudouridylate synthase domain containing 1
Low tissue specificity
Detected in all
RPUSD4
ENSSSCG00000015233
ENSG00000165526
RNA pseudouridylate synthase domain-containing protein 4
Low tissue specificity
Detected in all
RREB1
ENSSSCG00000001021
ENSG00000124782
Ras responsive element binding protein 1
Low tissue specificity
Detected in all
RRNAD1
ENSSSCG00000006470
ENSG00000143303
Protein RRNAD1
Low tissue specificity
Detected in all
RRP1
ENSSSCG00000037061
ENSG00000160214
Ribosomal RNA processing 1
Low tissue specificity
Detected in all
RRP1B
ENSSSCG00000021698
ENSG00000160208
Ribosomal RNA processing 1B
Tissue enhanced
Detected in all
testis:
54.1
RRP8
ENSSSCG00000023880
ENSG00000132275
Ribosomal RNA processing 8
Low tissue specificity
Detected in all
RRP9
ENSSSCG00000023177
ENSG00000114767
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein
Low tissue specificity
Detected in all
RSBN1
ENSSSCG00000030154
ENSG00000081019
Round spermatid basic protein 1
Low tissue specificity
Detected in all
RSBN1L
ENSSSCG00000038977
ENSG00000187257
Round spermatid basic protein 1 like
Low tissue specificity
Detected in all
RSC1A1
ENSSSCG00000003461
ENSG00000215695
Regulatory solute carrier protein family 1 member 1
Tissue enhanced
Detected in all
liver:
77.9
RSRC1
ENSSSCG00000027556
ENSG00000174891
Arginine and serine rich coiled-coil 1
Low tissue specificity
Detected in all
RSRC2
ENSSSCG00000009791
ENSG00000111011
Arginine and serine rich coiled-coil 2
Low tissue specificity
Detected in all
RSRP1
ENSSSCG00000034449
ENSG00000117616
Arginine/serine-rich protein 1
Low tissue specificity
Detected in all
SAFB
ENSSSCG00000013522
ENSG00000160633
Scaffold attachment factor B
Low tissue specificity
Detected in all
SAFB2
ENSSSCG00000013523
ENSG00000130254
Scaffold attachment factor B2
Low tissue specificity
Detected in all
SAP130
ENSSSCG00000015859
ENSG00000136715
Sin3A associated protein 130
Low tissue specificity
Detected in all
SAP30
ENSSSCG00000030118
ENSG00000164105
Sin3A associated protein 30
Low tissue specificity
Detected in all
SART1
ENSSSCG00000012963
ENSG00000175467
SART1, U4/U6.U5 tri-snRNP-associated protein 1
Low tissue specificity
Detected in all
SART3
ENSSSCG00000009946
ENSG00000075856
Squamous cell carcinoma antigen recognized by T cells 3
Low tissue specificity
Detected in all
SASS6
ENSSSCG00000028821
ENSG00000156876
SAS-6 centriolar assembly protein
Tissue enhanced
Detected in all
liver:
34.5
lymphoid tissue:
27.4
SAYSD1
ENSSSCG00000033246
ENSG00000112167
SAYSVFN motif domain containing 1
Tissue enriched
Detected in all
testis:
83.1
SBF1
ENSSSCG00000000968
ENSG00000100241
Myotubularin-related protein 5
Low tissue specificity
Detected in all
SBNO2
ENSSSCG00000030042
ENSG00000064932
Strawberry notch homolog 2
Low tissue specificity
Detected in all
SCAF1
ENSSSCG00000038807
ENSG00000126461
SR-related CTD associated factor 1
Low tissue specificity
Detected in all
SCAF11
ENSSSCG00000000806
ENSG00000139218
SR-related CTD associated factor 11
Low tissue specificity
Detected in all
SCAF4
ENSSSCG00000021023
ENSG00000156304
SR-related CTD associated factor 4
Low tissue specificity
Detected in all
SCAF8
ENSSSCG00000004070
ENSG00000213079
SR-related CTD associated factor 8
Low tissue specificity
Detected in all
SCLT1
ENSSSCG00000029943
ENSG00000151466
Sodium channel and clathrin linker 1
Low tissue specificity
Detected in all
SCLY
ENSSSCG00000016334
ENSG00000132330
Selenocysteine lyase
Tissue enhanced
Detected in all
liver:
41.0
SCRIB
ENSSSCG00000039466
ENSG00000180900
Scribbled planar cell polarity protein
Low tissue specificity
Detected in all
SCX
ENSSSCG00000034551
ENSG00000260428
Scleraxis bHLH transcription factor
Tissue enhanced
Detected in many
penis:
21.1
synovial tissue:
19.6
SCYL3
ENSSSCG00000006283
ENSG00000000457
SCY1 like pseudokinase 3
Low tissue specificity
Detected in all
SDCCAG3
ENSSSCG00000035221
ENSG00000165689
Serologically defined colon cancer antigen 3
Tissue enhanced
Detected in all
testis:
59.8
SDCCAG8
ENSSSCG00000035136
ENSG00000054282
Serologically defined colon cancer antigen 8
Low tissue specificity
Detected in all
SDE2
ENSSSCG00000010858
ENSG00000143751
SDE2 telomere maintenance homolog
Low tissue specificity
Detected in all
SEC16A
ENSSSCG00000034854
ENSG00000148396
SEC16 homolog A, endoplasmic reticulum export factor
Low tissue specificity
Detected in all
SEC23IP
ENSSSCG00000010690
ENSG00000107651
SEC23 interacting protein
Low tissue specificity
Detected in all
SEC24B
ENSSSCG00000009142
ENSG00000138802
SEC24 homolog B, COPII coat complex component
Low tissue specificity
Detected in all
SEC31B
ENSSSCG00000006165
ENSG00000075826
SEC31 homolog B, COPII coat complex component
Low tissue specificity
Detected in all
SEC61G
ENSSSCG00000035434
ENSG00000132432
Sec61 translocon gamma subunit
Low tissue specificity
Detected in all
SECISBP2
ENSSSCG00000028033
ENSG00000187742
SECIS binding protein 2
Low tissue specificity
Detected in all
SELENOO
ENSSSCG00000000973
ENSG00000073169
Selenoprotein O
Low tissue specificity
Detected in all
SENP1
ENSSSCG00000000816
ENSG00000079387
SUMO1/sentrin specific peptidase 1
Low tissue specificity
Detected in all
« prev
| Page
of 46 |
next »
MENU
