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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
Cardiovascular diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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402 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000036675
Tissue enhanced
Detected in all
salivary gland:
36.6
na
ENSSSCG00000036717
Tissue enhanced
Detected in some
male glands:
27.9
salivary gland:
23.8
upper respiratory system:
16.1
na
ENSSSCG00000036741
ENSG00000069011
Pituitary homeobox 1
Tissue enhanced
Detected in many
cartilage:
30.2
male glands:
87.0
mouth:
33.4
salivary gland:
41.5
stomach:
37.4
na
ENSSSCG00000036859
Tissue enhanced
Detected in many
ductus deferens:
14.7
endometrium:
16.0
stomach:
21.8
na
ENSSSCG00000037358
Serum amyloid A-3 protein precursor
Tissue enhanced
Detected in many
male glands:
56.1
na
ENSSSCG00000037429
Tissue enhanced
Detected in many
retina:
19.5
na
ENSSSCG00000037629
Tissue enhanced
Detected in some
esophagus:
4.3
male glands:
3.4
pituitary gland:
3.0
small intestine:
3.0
na
ENSSSCG00000037798
Tissue enhanced
Detected in many
male glands:
16.8
na
ENSSSCG00000037915
Low tissue specificity
Detected in many
na
ENSSSCG00000038135
Tissue enhanced
Detected in many
breast:
22.6
cartilage:
27.4
stomach:
22.5
na
ENSSSCG00000038388
Low tissue specificity
Detected in many
na
ENSSSCG00000038645
Tissue enhanced
Detected in many
epididymis:
16.1
male glands:
18.8
na
ENSSSCG00000038725
Tissue enhanced
Detected in many
male glands:
33.8
na
ENSSSCG00000038749
Low tissue specificity
Detected in many
na
ENSSSCG00000039304
Tissue enhanced
Detected in many
cornea:
52.0
mouth:
23.0
na
ENSSSCG00000039349
Tissue enhanced
Detected in many
salivary gland:
8.1
stomach:
8.9
upper respiratory system:
6.9
na
ENSSSCG00000039682
Tissue enhanced
Detected in many
epididymis:
29.1
na
ENSSSCG00000039793
ENSG00000132849
Low tissue specificity
Detected in all
na
ENSSSCG00000039808
Low tissue specificity
Detected in many
na
ENSSSCG00000040532
Tissue enhanced
Detected in many
breast:
13.7
epididymis:
20.4
na
ENSSSCG00000040661
Tissue enhanced
Detected in many
esophagus:
25.4
na
ENSSSCG00000040842
Low tissue specificity
Detected in many
na
ENSSSCG00000040871
Tissue enhanced
Detected in many
epididymis:
17.1
na
ENSSSCG00000040913
Low tissue specificity
Detected in all
NCCRP1
ENSSSCG00000026407
ENSG00000188505
Non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)
Tissue enhanced
Detected in many
cornea:
45.8
mouth:
50.5
urinary bladder:
41.3
NECTIN4
ENSSSCG00000026861
ENSG00000143217
Nectin cell adhesion molecule 4
Tissue enhanced
Detected in many
cornea:
28.9
male glands:
19.1
mouth:
24.0
skin:
19.1
urinary bladder:
17.6
NIPAL1
ENSSSCG00000037950
ENSG00000163293
NIPA like domain containing 1
Tissue enhanced
Detected in many
male glands:
42.3
NKX3-1
ENSSSCG00000031924
ENSG00000167034
NK3 homeobox 1
Tissue enriched
Detected in some
male glands:
206.7
NOXA1
ENSSSCG00000033685
ENSG00000188747
NADPH oxidase activator 1
Tissue enhanced
Detected in many
stomach:
32.2
NPNT
ENSSSCG00000038801
ENSG00000168743
Nephronectin
Tissue enhanced
Detected in many
cornea:
52.6
thyroid gland:
41.8
NTF4
ENSSSCG00000003160
ENSG00000225950
Neurotrophin-4 precursor
Tissue enhanced
Detected in many
male glands:
17.7
skeletal muscle:
31.8
OCLN
ENSSSCG00000021514
ENSG00000197822
Occludin
Tissue enhanced
Detected in all
choroid plexus:
56.9
OVOL1
ENSSSCG00000027361
ENSG00000172818
Ovo like transcriptional repressor 1
Tissue enhanced
Detected in many
large intestine:
31.1
stomach:
22.1
OVOL2
ENSSSCG00000036377
ENSG00000125850
Ovo like zinc finger 2
Tissue enhanced
Detected in many
male glands:
22.0
salivary gland:
17.3
PARD6G
ENSSSCG00000023376
ENSG00000178184
Par-6 family cell polarity regulator gamma
Tissue enhanced
Detected in many
cornea:
24.6
PERP
ENSSSCG00000038420
ENSG00000112378
P53 apoptosis effector related to PMP-22
Tissue enhanced
Detected in many
cornea:
115.4
mouth:
93.3
skin:
53.2
PIP4K2C
ENSSSCG00000000436
ENSG00000166908
Phosphatidylinositol-5-phosphate 4-kinase type 2 gamma
Group enriched
Detected in many
male glands:
21.5
thyroid gland:
72.0
PKP2
ENSSSCG00000000528
ENSG00000057294
Plakophilin 2
Tissue enhanced
Detected in all
heart:
57.1
PKP3
ENSSSCG00000027302
ENSG00000184363
Plakophilin 3
Tissue enhanced
Detected in many
cornea:
19.2
mouth:
25.2
skin:
24.9
PLCB4
ENSSSCG00000007058
ENSG00000101333
Phospholipase C beta 4
Tissue enhanced
Detected in all
salivary gland:
70.1
PLEK2
ENSSSCG00000002290
ENSG00000100558
Pleckstrin 2
Low tissue specificity
Detected in many
PLEKHG6
ENSSSCG00000000709
ENSG00000008323
Pleckstrin homology and RhoGEF domain containing G6
Tissue enhanced
Detected in many
large intestine:
18.6
mouth:
23.8
small intestine:
19.9
PM20D2
ENSSSCG00000004314
ENSG00000146281
Peptidase M20 domain containing 2
Low tissue specificity
Detected in all
PPP1R13L
ENSSSCG00000036542
ENSG00000104881
Protein phosphatase 1 regulatory subunit 13 like
Tissue enhanced
Detected in many
heart:
34.6
skin:
63.8
PROM1
ENSSSCG00000008745
ENSG00000007062
Prominin 1
Group enriched
Detected in many
male glands:
120.2
retina:
46.7
upper respiratory system:
41.6
PROM2
ENSSSCG00000008118
ENSG00000155066
Prominin 2
Tissue enhanced
Detected in many
cornea:
71.6
stomach:
54.5
PROSER2
ENSSSCG00000022247
ENSG00000148426
Proline and serine rich 2
Low tissue specificity
Detected in many
PRR15
ENSSSCG00000016686
ENSG00000176532
Proline rich 15
Tissue enriched
Detected in many
male glands:
87.3
PRR15L
ENSSSCG00000024743
ENSG00000167183
Proline rich 15 like
Tissue enhanced
Detected in many
large intestine:
88.9
male glands:
109.6
PRRG4
ENSSSCG00000013313
ENSG00000135378
Transmembrane gamma-carboxyglutamic acid protein 4 precursor
Low tissue specificity
Detected in all
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