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Gene name
Human disease related genes
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Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
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Gene name
Class
Cancers
Cardiovascular diseases
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Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
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402 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
MST1R
ENSSSCG00000027992
ENSG00000164078
Macrophage stimulating 1 receptor
Tissue enhanced
Detected in many
skin:
31.4
stomach:
32.8
MYH14
ENSSSCG00000027407
ENSG00000105357
Myosin heavy chain 14
Tissue enhanced
Detected in many
cornea:
86.4
large intestine:
64.0
stomach:
61.9
MYO5B
ENSSSCG00000004511
ENSG00000167306
Myosin VB
Tissue enhanced
Detected in many
lens:
59.4
MYO5C
ENSSSCG00000004621
ENSG00000128833
Myosin VC
Tissue enhanced
Detected in many
male glands:
56.6
salivary gland:
39.5
na
ENSSSCG00000000021
ENSG00000241484,ENSG00000248405
Rho GTPase-activating protein 8
Tissue enhanced
Detected in many
male glands:
34.8
salivary gland:
31.3
na
ENSSSCG00000000199
ENSG00000123352
Tissue enhanced
Detected in all
male glands:
58.9
na
ENSSSCG00000000983
ENSG00000188263
Tissue enhanced
Detected in many
esophagus:
43.8
male glands:
34.2
salivary gland:
50.3
na
ENSSSCG00000001596
ENSG00000124615
Tissue enhanced
Detected in all
kidney:
48.2
liver:
53.3
mouth:
50.4
na
ENSSSCG00000003963
Tissue enhanced
Detected in many
fallopian tube:
18.6
salivary gland:
12.8
na
ENSSSCG00000004197
Tissue enhanced
Detected in many
esophagus:
4.4
kidney:
6.8
upper respiratory system:
9.5
na
ENSSSCG00000004760
ENSG00000166143
Protein phosphatase 1 regulatory subunit 14D
Tissue enhanced
Detected in many
large intestine:
29.3
male glands:
15.4
small intestine:
14.3
na
ENSSSCG00000004983
Tissue enhanced
Detected in all
male glands:
80.7
salivary gland:
46.0
na
ENSSSCG00000005612
ENSG00000197958
Tissue enhanced
Detected in many
large intestine:
23.9
na
ENSSSCG00000006360
ENSG00000158850
Low tissue specificity
Detected in all
na
ENSSSCG00000006525
ENSG00000185499
Tissue enhanced
Detected in many
ductus deferens:
54.4
gallbladder:
54.0
kidney:
50.9
stomach:
70.9
na
ENSSSCG00000006793
Low tissue specificity
Detected in all
na
ENSSSCG00000007642
ENSG00000160862
Tissue enhanced
Detected in many
liver:
107.9
male glands:
63.8
salivary gland:
37.7
na
ENSSSCG00000008001
ENSG00000102854
Tissue enhanced
Detected in many
cornea:
31.8
gallbladder:
30.3
mesothelial tissue:
27.5
na
ENSSSCG00000008314
ENSG00000116039
Tissue enhanced
Detected in some
fallopian tube:
33.6
kidney:
103.8
na
ENSSSCG00000009694
Low tissue specificity
Detected in all
na
ENSSSCG00000012566
Low tissue specificity
Detected in all
na
ENSSSCG00000012977
ENSG00000142541
Tissue enhanced
Detected in many
kidney:
22.8
male glands:
16.2
testis:
14.9
na
ENSSSCG00000013173
Low tissue specificity
Detected in many
na
ENSSSCG00000014004
ENSG00000141934
Phospholipid phosphatase 2
Tissue enhanced
Detected in many
male glands:
42.1
na
ENSSSCG00000014096
Tissue enhanced
Detected in many
large intestine:
19.4
stomach:
21.4
thyroid gland:
19.5
na
ENSSSCG00000016400
ENSG00000172478
Tissue enhanced
Detected in many
heart:
13.5
lung:
10.3
mouth:
24.0
skin:
13.3
na
ENSSSCG00000017811
Tissue enhanced
Detected in many
male glands:
11.7
salivary gland:
20.0
na
ENSSSCG00000020725
ENSG00000065361
Tissue enhanced
Detected in many
liver:
49.6
vagus nerve:
57.8
na
ENSSSCG00000020837
Tissue enhanced
Detected in many
esophagus:
45.2
male glands:
91.6
salivary gland:
64.0
na
ENSSSCG00000020838
Tissue enhanced
Detected in some
epididymis:
3.1
male glands:
3.5
mesothelial tissue:
3.6
skin:
3.0
na
ENSSSCG00000020850
Tissue enhanced
Detected in many
gallbladder:
10.4
male glands:
10.2
testis:
18.6
na
ENSSSCG00000021815
ENSG00000134470
Low tissue specificity
Detected in all
na
ENSSSCG00000023187
Tissue enhanced
Detected in many
kidney:
31.8
mouth:
41.8
na
ENSSSCG00000023871
ENSG00000177694
Tissue enhanced
Detected in many
salivary gland:
54.4
na
ENSSSCG00000024336
ENSG00000184012
Tissue enhanced
Detected in many
kidney:
36.9
male glands:
92.6
na
ENSSSCG00000024666
ENSG00000089356
FXYD domain-containing ion transport regulator 3 precursor
Tissue enhanced
Detected in many
esophagus:
71.7
salivary gland:
71.9
stomach:
109.7
upper respiratory system:
113.0
na
ENSSSCG00000025992
ENSG00000154269
Tissue enhanced
Detected in many
epididymis:
26.8
kidney:
26.6
upper respiratory system:
30.9
na
ENSSSCG00000026996
ENSG00000125257
Low tissue specificity
Detected in all
na
ENSSSCG00000031023
Tissue enriched
Detected in many
lens:
555.9
na
ENSSSCG00000031529
Interferon omega 1 precursor
Tissue enhanced
Detected in many
skin:
23.5
na
ENSSSCG00000031784
Tissue enhanced
Detected in many
liver:
10.6
skin:
6.9
thyroid gland:
7.5
na
ENSSSCG00000031979
ENSG00000151364
Low tissue specificity
Detected in all
na
ENSSSCG00000032334
Tissue enhanced
Detected in all
male glands:
28.8
stomach:
33.1
na
ENSSSCG00000033145
Tissue enhanced
Detected in some
fallopian tube:
41.7
kidney:
123.9
salivary gland:
27.4
na
ENSSSCG00000033882
Tissue enhanced
Detected in many
male glands:
32.0
na
ENSSSCG00000034142
Tissue enhanced
Detected in many
choroid plexus:
8.1
stomach:
9.0
thyroid gland:
8.3
na
ENSSSCG00000035314
Tissue enhanced
Detected in many
kidney:
8.7
male glands:
9.9
na
ENSSSCG00000035551
Tissue enhanced
Detected in many
male glands:
77.5
na
ENSSSCG00000035726
Tissue enhanced
Detected in many
liver:
37.9
na
ENSSSCG00000035738
60S ribosomal protein L36a
Tissue enhanced
Detected in many
kidney:
39.6
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