We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
253 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 6 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000035706
Group enriched
Detected in many
gallbladder:
55.5
large intestine:
19.3
liver:
61.6
small intestine:
50.4
stomach:
41.5
na
ENSSSCG00000036248
Group enriched
Detected in some
gallbladder:
22.9
large intestine:
59.4
small intestine:
50.1
stomach:
38.7
na
ENSSSCG00000036392
Tissue enhanced
Detected in some
bone marrow:
2.0
small intestine:
2.9
stomach:
1.6
na
ENSSSCG00000036427
Free fatty acid receptor 2-like
Tissue enhanced
Detected in many
small intestine:
15.7
na
ENSSSCG00000036689
Tissue enriched
Detected in some
stomach:
18.6
na
ENSSSCG00000036743
Tissue enhanced
Detected in many
small intestine:
13.7
na
ENSSSCG00000037244
Tissue enhanced
Detected in some
breast:
8.5
liver:
38.4
stomach:
12.3
na
ENSSSCG00000037521
Group enriched
Detected in some
large intestine:
7.4
liver:
28.9
small intestine:
18.2
na
ENSSSCG00000038275
Tissue enhanced
Detected in all
small intestine:
20.1
na
ENSSSCG00000038419
Tissue enriched
Detected in all
large intestine:
74.2
na
ENSSSCG00000038483
Low tissue specificity
Detected in all
na
ENSSSCG00000038606
Tissue enriched
Detected in some
large intestine:
33.9
na
ENSSSCG00000039284
Tissue enhanced
Detected in some
adipose tissue:
1.2
salivary gland:
1.8
stomach:
1.7
na
ENSSSCG00000039341
ENSG00000109193
Estrogen sulfotransferase
Tissue enhanced
Detected in all
liver:
65.9
na
ENSSSCG00000039357
Tissue enhanced
Detected in many
brain:
8.4
na
ENSSSCG00000039511
Group enriched
Detected in some
large intestine:
216.4
small intestine:
64.6
stomach:
229.8
na
ENSSSCG00000039518
Tissue enhanced
Detected in some
brain:
2.7
stomach:
3.7
na
ENSSSCG00000039634
Tissue enhanced
Detected in many
brain:
22.7
male glands:
17.2
thyroid gland:
17.7
na
ENSSSCG00000039892
Low tissue specificity
Detected in many
na
ENSSSCG00000040035
ENSG00000198788
Group enriched
Detected in some
large intestine:
166.2
small intestine:
75.6
stomach:
258.5
na
ENSSSCG00000040149
ENSG00000174021
Tissue enhanced
Detected in some
brain:
1.3
large intestine:
2.2
skin:
1.9
small intestine:
5.0
na
ENSSSCG00000040414
ENSG00000062524
Tissue enhanced
Detected in some
stomach:
3.3
testis:
4.5
NAALADL1
ENSSSCG00000013010
ENSG00000168060
N-acetylated alpha-linked acidic dipeptidase like 1
Tissue enriched
Detected in all
small intestine:
77.2
NEURL3
ENSSSCG00000008124
ENSG00000163121
Neuralized E3 ubiquitin protein ligase 3
Tissue enhanced
Detected in some
large intestine:
8.3
small intestine:
4.4
stomach:
11.1
NEUROG3
ENSSSCG00000034488
ENSG00000122859
Neurogenin 3
Group enriched
Detected in some
large intestine:
5.9
pineal gland:
6.7
small intestine:
7.2
stomach:
7.1
NKX2-3
ENSSSCG00000010538
ENSG00000119919
NK2 homeobox 3
Group enriched
Detected in some
large intestine:
7.1
lymphoid tissue:
8.1
small intestine:
13.9
smooth muscle:
20.7
NME4
ENSSSCG00000007986
ENSG00000103202
Nucleoside diphosphate kinase, mitochondrial
Low tissue specificity
Detected in many
NOBOX
ENSSSCG00000024977
ENSG00000106410
Homeobox protein NOBOX
Group enriched
Detected in some
bone marrow:
13.4
epididymis:
6.3
NPVF
ENSSSCG00000036611
ENSG00000105954
Neuropeptide VF precursor
Tissue enhanced
Detected in some
brain:
6.7
stomach:
13.3
testis:
5.9
NXPE4
ENSSSCG00000026203
ENSG00000137634
Neurexophilin and PC-esterase domain family member 4
Tissue enhanced
Detected in many
breast:
18.9
large intestine:
41.3
liver:
19.0
OTOG
ENSSSCG00000013376
ENSG00000188162
Otogelin
Tissue enhanced
Detected in some
gallbladder:
4.9
kidney:
3.3
large intestine:
3.9
testis:
11.3
OTOP2
ENSSSCG00000017222
ENSG00000183034
Otopetrin 2
Tissue enhanced
Detected in all
large intestine:
20.5
P2RY4
ENSSSCG00000012380
ENSG00000186912
P2Y purinoceptor 4
Group enriched
Detected in some
large intestine:
3.1
small intestine:
10.6
stomach:
3.0
PARP15
ENSSSCG00000011875
ENSG00000173200
Poly(ADP-ribose) polymerase family member 15
Group enriched
Detected in some
large intestine:
59.5
small intestine:
95.1
PDSS1
ENSSSCG00000011061
ENSG00000148459
Decaprenyl diphosphate synthase subunit 1
Tissue enhanced
Detected in all
large intestine:
32.3
PGA5
ENSSSCG00000013092
ENSG00000229183,ENSG00000229859,ENSG00000256713
Pepsin A
Tissue enriched
Detected in single
stomach:
413.6
PGC
ENSSSCG00000001625
ENSG00000096088
Progastricsin
Tissue enriched
Detected in some
stomach:
240.5
PHOX2B
ENSSSCG00000038488
ENSG00000109132
Paired like homeobox 2b
Tissue enhanced
Detected in some
adrenal gland:
25.0
small intestine:
6.3
smooth muscle:
5.2
PLA2G10
ENSSSCG00000040569
ENSG00000069764
Phospholipase A2 group X
Low tissue specificity
Detected in all
PLBD1
ENSSSCG00000026724
ENSG00000070019
Phospholipase B-like 1 precursor
Tissue enriched
Detected in all
ovary:
103.9
PNLIPRP2
ENSSSCG00000010660
Pancreatic lipase-related protein 2 precursor
Tissue enriched
Detected in some
stomach:
238.7
PTPRH
ENSSSCG00000024567
ENSG00000080031
Protein tyrosine phosphatase, receptor type H
Group enriched
Detected in some
large intestine:
31.1
small intestine:
24.3
stomach:
31.4
PYY
ENSSSCG00000025414
ENSG00000131096
Peptide YY precursor
Tissue enhanced
Detected in some
large intestine:
29.9
small intestine:
88.2
stomach:
21.9
RCAN3
ENSSSCG00000024818
ENSG00000117602
RCAN family member 3
Tissue enhanced
Detected in all
large intestine:
50.8
REG4
ENSSSCG00000040947
ENSG00000134193
Regenerating islet-derived protein 4 precursor
Tissue enriched
Detected in many
large intestine:
72.2
RETNLB
ENSSSCG00000011939
ENSG00000163515
Resistin-like beta precursor
Group enriched
Detected in some
large intestine:
17.1
small intestine:
19.8
RHAG
ENSSSCG00000001735
ENSG00000112077
Rh associated glycoprotein
Tissue enhanced
Detected in many
dura mater:
12.9
large intestine:
8.7
small intestine:
19.5
stomach:
10.6
ROS1
ENSSSCG00000026978
ENSG00000047936
ROS proto-oncogene 1, receptor tyrosine kinase
Tissue enhanced
Detected in some
epididymis:
17.9
gallbladder:
16.8
lung:
8.9
small intestine:
20.7
RTL4
ENSSSCG00000012589
ENSG00000187823
Retrotransposon Gag like 4
Group enriched
Detected in some
epididymis:
15.9
large intestine:
9.5
liver:
14.4
small intestine:
10.6
SCTR
ENSSSCG00000029536
ENSG00000080293
Secretin receptor precursor
Tissue enhanced
Detected in some
gallbladder:
16.6
kidney:
12.0
small intestine:
14.6
stomach:
18.7
« prev
| Page
of 6 |
next »