We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
1159 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 24 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
PLEKHS1
ENSSSCG00000034754
ENSG00000148735
Pleckstrin homology domain containing S1
Low tissue specificity
Detected in all
PLIN2
ENSSSCG00000035863
ENSG00000147872
Perilipin-2
Low tissue specificity
Detected in all
PLSCR5
ENSSSCG00000011691
ENSG00000231213
Phospholipid scramblase family member 5
Low tissue specificity
Detected in all
PNOC
ENSSSCG00000032600
ENSG00000168081
Nociceptin precursor
Low tissue specificity
Detected in all
POU1F1
ENSSSCG00000011996
ENSG00000064835
Pituitary-specific positive transcription factor 1
Tissue enriched
Detected in many
pituitary gland:
76.5
PP2D1
ENSSSCG00000027327
ENSG00000183977
Protein phosphatase 2C like domain containing 1
Tissue enriched
Detected in all
testis:
46.1
PPAT
ENSSSCG00000008902
ENSG00000128059
Phosphoribosyl pyrophosphate amidotransferase
Low tissue specificity
Detected in all
PPBP
ENSSSCG00000037579
ENSG00000163736
Platelet basic protein
Low tissue specificity
Detected in all
PPIC
ENSSSCG00000031128
ENSG00000168938
Peptidylprolyl isomerase C
Low tissue specificity
Detected in all
PROKR2
ENSSSCG00000037063
ENSG00000101292
Prokineticin receptor 2
Low tissue specificity
Detected in all
PROP1
ENSSSCG00000029569
ENSG00000175325
Homeobox protein prophet of Pit-1
Tissue enriched
Detected in all
pituitary gland:
38.2
PRSS16
ENSSSCG00000025410
ENSG00000112812
Serine protease 16
Tissue enriched
Detected in all
lymphoid tissue:
113.9
PRSS53
ENSSSCG00000007765
ENSG00000151006
Serine protease 53
Low tissue specificity
Detected in all
PRSS55
ENSSSCG00000009687
ENSG00000184647
Serine protease 55
Tissue enhanced
Detected in all
testis:
38.5
PXMP4
ENSSSCG00000034625
ENSG00000101417
Peroxisomal membrane protein 4
Low tissue specificity
Detected in all
PYM1
ENSSSCG00000040825
ENSG00000170473
PYM homolog 1, exon junction complex associated factor
Low tissue specificity
Detected in all
RAB19
ENSSSCG00000038693
ENSG00000146955
RAB19, member RAS oncogene family
Tissue enhanced
Detected in all
lymphoid tissue:
40.5
RBFA
ENSSSCG00000005773
ENSG00000101546
Ribosome binding factor A
Low tissue specificity
Detected in all
RCCD1
ENSSSCG00000001822
ENSG00000166965
RCC1 domain containing 1
Low tissue specificity
Detected in all
RD3
ENSSSCG00000035369
ENSG00000198570
Retinal degeneration 3
Tissue enriched
Detected in all
retina:
54.1
RD3L
ENSSSCG00000033990
ENSG00000227729
Retinal degeneration 3-like
Low tissue specificity
Detected in all
REC114
ENSSSCG00000039508
ENSG00000183324
REC114 meiotic recombination protein
Low tissue specificity
Detected in all
REN
ENSSSCG00000031235
ENSG00000143839
Renin
Low tissue specificity
Detected in all
RHEX
ENSSSCG00000015638
ENSG00000263961
Regulator of hemoglobinization and erythroid cell expansion
Low tissue specificity
Detected in all
RIPPLY1
ENSSSCG00000033276
ENSG00000147223
Ripply transcriptional repressor 1
Tissue enriched
Detected in many
epididymis:
65.9
RIT1
ENSSSCG00000023991
ENSG00000143622
GTP-binding protein Rit1
Low tissue specificity
Detected in all
RNASEH2A
ENSSSCG00000013737
ENSG00000104889
Ribonuclease H2 subunit A
Low tissue specificity
Detected in all
RND1
ENSSSCG00000038562
ENSG00000172602
Rho family GTPase 1
Low tissue specificity
Detected in all
ROBO3
ENSSSCG00000015202
ENSG00000154134
Roundabout guidance receptor 3
Low tissue specificity
Detected in all
ROM1
ENSSSCG00000033054
ENSG00000149489
Retinal outer segment membrane protein 1
Group enriched
Detected in all
pineal gland:
16.6
retina:
57.3
RP2
ENSSSCG00000027701
ENSG00000102218
RP2, ARL3 GTPase activating protein
Tissue enriched
Detected in all
thyroid gland:
99.4
RPP40
ENSSSCG00000000998
ENSG00000124787
Ribonuclease P/MRP subunit p40
Low tissue specificity
Detected in all
RRH
ENSSSCG00000009136
ENSG00000180245
Retinal pigment epithelium-derived rhodopsin homolog
Low tissue specificity
Detected in all
RRM2B
ENSSSCG00000036139
ENSG00000048392
Ribonucleotide reductase regulatory TP53 inducible subunit M2B
Low tissue specificity
Detected in all
RTL9
ENSSSCG00000027981
ENSG00000243978
Retrotransposon Gag like 9
Low tissue specificity
Detected in all
RUFY4
ENSSSCG00000016182
ENSG00000188282
RUN and FYVE domain containing 4
Low tissue specificity
Detected in all
RWDD3
ENSSSCG00000036509
ENSG00000122481
RWD domain containing 3
Low tissue specificity
Detected in all
RXFP1
ENSSSCG00000008875
ENSG00000171509
Relaxin/insulin like family peptide receptor 1
Tissue enhanced
Detected in all
cervix:
33.0
endometrium:
21.6
S100Z
ENSSSCG00000014092
ENSG00000171643
S100 calcium binding protein Z
Low tissue specificity
Detected in all
SALL4
ENSSSCG00000007479
ENSG00000101115
Sal-like protein 4
Tissue enhanced
Detected in all
male glands:
19.1
SAMSN1
ENSSSCG00000038062
ENSG00000155307
SAM domain, SH3 domain and nuclear localization signals 1
Low tissue specificity
Detected in all
SCUBE3
ENSSSCG00000001536
ENSG00000146197
Signal peptide, CUB domain and EGF like domain containing 3
Low tissue specificity
Detected in all
SDR16C5
ENSSSCG00000006245
ENSG00000170786
Epidermal retinol dehydrogenase 2
Tissue enhanced
Detected in all
adipose tissue:
27.7
SDR42E1
ENSSSCG00000035182
ENSG00000184860
Short chain dehydrogenase/reductase family 42E, member 1
Low tissue specificity
Detected in all
SERAC1
ENSSSCG00000012314
ENSG00000122335
Serine active site containing 1
Low tissue specificity
Detected in all
SERPINB2
ENSSSCG00000004890
ENSG00000197632
Serpin family B member 2
Tissue enhanced
Detected in all
heart:
32.2
SERPINB7
ENSSSCG00000004891
ENSG00000166396
Serpin family B member 7
Low tissue specificity
Detected in all
SETD9
ENSSSCG00000016919
ENSG00000155542
SET domain containing 9
Low tissue specificity
Detected in all
SH2D1A
ENSSSCG00000012643
ENSG00000183918
SH2 domain-containing protein 1A
Tissue enriched
Detected in all
lymphoid tissue:
73.7
SH2D1B
ENSSSCG00000032108
ENSG00000198574
SH2 domain containing 1B
Tissue enhanced
Detected in all
male glands:
29.3
« prev
| Page
of 24 |
next »
MENU
