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Human disease related genes
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Keyword
Chromosome
1
2
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7
8
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MT
Unmapped
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
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Stomach 1
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Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
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THE PROJECT
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826 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
FEZ1
ENSSSCG00000015212
ENSG00000149557
Fasciculation and elongation protein zeta 1
Tissue enhanced
Detected in some
brain:
70.8
lens:
16.5
pineal gland:
24.7
FGF1
ENSSSCG00000024954
ENSG00000113578
Fibroblast growth factor 1
Tissue enhanced
Detected in many
brain:
37.4
heart:
22.8
lens:
33.4
pineal gland:
28.4
FGF11
ENSSSCG00000034757
ENSG00000161958
Fibroblast growth factor 11
Low tissue specificity
Detected in all
FGF2
ENSSSCG00000036213
ENSG00000138685
Fibroblast growth factor 2
Tissue enhanced
Detected in all
choroid plexus:
38.9
FGF9
ENSSSCG00000009278
ENSG00000102678
Fibroblast growth factor 9
Tissue enhanced
Detected in many
adrenal gland:
30.5
kidney:
21.7
FLYWCH2
ENSSSCG00000022630
ENSG00000162076
FLYWCH family member 2
Tissue enhanced
Detected in many
lens:
30.9
FNDC4
ENSSSCG00000029305
ENSG00000115226
Fibronectin type III domain containing 4
Tissue enhanced
Detected in many
brain:
35.6
FOLH1B
ENSSSCG00000027093
ENSG00000086205
Glutamate carboxypeptidase 2
Tissue enhanced
Detected in many
brain:
60.3
lens:
40.1
FRMD5
ENSSSCG00000004694
ENSG00000171877
FERM domain containing 5
Tissue enhanced
Detected in many
brain:
33.6
ductus deferens:
26.5
epididymis:
22.0
male glands:
32.1
FTO
ENSSSCG00000035949
ENSG00000140718
Alpha-ketoglutarate-dependent dioxygenase FTO
Low tissue specificity
Detected in all
FZD3
ENSSSCG00000009679
ENSG00000104290
Frizzled class receptor 3
Tissue enhanced
Detected in many
brain:
25.7
GABARAPL1
ENSSSCG00000000645
ENSG00000139112
Gamma-aminobutyric acid receptor-associated protein-like 1
Tissue enhanced
Detected in all
lens:
99.9
GABRG1
ENSSSCG00000008809
ENSG00000163285
Gamma-aminobutyric acid type A receptor gamma1 subunit
Group enriched
Detected in some
brain:
38.8
pituitary gland:
11.0
GAL3ST3
ENSSSCG00000028015
ENSG00000175229
Galactose-3-O-sulfotransferase 3
Tissue enhanced
Detected in many
brain:
13.3
epididymis:
15.4
mesothelial tissue:
16.8
GAREM2
ENSSSCG00000008572
ENSG00000157833
GRB2 associated regulator of MAPK1 subtype 2
Tissue enhanced
Detected in many
brain:
13.7
GAS2
ENSSSCG00000031940
ENSG00000148935
Growth arrest specific 2
Tissue enhanced
Detected in many
brain:
24.3
liver:
36.3
GDF11
ENSSSCG00000000363
ENSG00000135414
Growth/differentiation factor 11 precursor
Tissue enriched
Detected in many
brain:
58.1
GDF2
ENSSSCG00000010375
ENSG00000263761
Growth differentiation factor 2
Tissue enriched
Detected in some
liver:
16.7
GDI1
ENSSSCG00000030421
ENSG00000203879
GDP dissociation inhibitor 1
Tissue enhanced
Detected in all
brain:
82.0
GFAP
ENSSSCG00000017343
ENSG00000131095
Glial fibrillary acidic protein
Group enriched
Detected in some
brain:
423.1
pineal gland:
126.7
GJB6
ENSSSCG00000036474
ENSG00000121742
Gap junction protein beta 6
Tissue enhanced
Detected in many
brain:
24.3
mouth:
21.2
skin:
39.1
GLDC
ENSSSCG00000005199
ENSG00000178445
Glycine decarboxylase
Group enriched
Detected in many
epididymis:
38.7
lens:
35.9
liver:
19.2
retina:
14.6
GLUL
ENSSSCG00000015545
ENSG00000135821
Glutamine synthetase
Tissue enhanced
Detected in all
brain:
161.1
GNG7
ENSSSCG00000033949
ENSG00000176533
G protein subunit gamma 7
Tissue enriched
Detected in all
brain:
110.7
GNL1
ENSSSCG00000001372
ENSG00000204590
Guanine nucleotide-binding protein-like 1
Low tissue specificity
Detected in all
GPR137B
ENSSSCG00000038853
ENSG00000077585
G protein-coupled receptor 137B
Tissue enhanced
Detected in all
lens:
81.7
GPR37
ENSSSCG00000016599
ENSG00000170775
G protein-coupled receptor 37
Tissue enriched
Detected in some
brain:
64.7
GPR37L1
ENSSSCG00000038768
ENSG00000170075
G protein-coupled receptor 37 like 1
Group enriched
Detected in some
brain:
34.0
vagus nerve:
14.7
GPRASP1
ENSSSCG00000012519
ENSG00000198932
G protein-coupled receptor associated sorting protein 1
Group enriched
Detected in many
brain:
27.5
pineal gland:
9.4
pituitary gland:
24.3
GPRASP2
ENSSSCG00000012521
ENSG00000158301
G protein-coupled receptor associated sorting protein 2
Tissue enhanced
Detected in many
brain:
35.6
pituitary gland:
31.8
GPRC5B
ENSSSCG00000007864
ENSG00000167191
G protein-coupled receptor class C group 5 member B
Tissue enhanced
Detected in all
brain:
75.1
lens:
84.2
ovary:
63.1
GPSM1
ENSSSCG00000039487
ENSG00000160360
G protein signaling modulator 1
Tissue enhanced
Detected in all
brain:
35.1
GPSM2
ENSSSCG00000021440
ENSG00000121957
G protein signaling modulator 2
Tissue enhanced
Detected in all
brain:
32.4
GPT2
ENSSSCG00000002847
ENSG00000166123
Glutamic--pyruvic transaminase 2
Tissue enhanced
Detected in many
brain:
43.4
kidney:
59.2
liver:
39.4
GRAMD1C
ENSSSCG00000011915
ENSG00000178075
GRAM domain containing 1C
Low tissue specificity
Detected in all
GRIA4
ENSSSCG00000030565
ENSG00000152578
Glutamate ionotropic receptor AMPA type subunit 4
Tissue enhanced
Detected in many
brain:
46.4
epididymis:
33.5
retina:
20.2
GRIK5
ENSSSCG00000003038
ENSG00000105737
Glutamate ionotropic receptor kainate type subunit 5
Tissue enhanced
Detected in many
testis:
30.5
GRIN3A
ENSSSCG00000005400
ENSG00000198785
Glutamate ionotropic receptor NMDA type subunit 3A
Tissue enhanced
Detected in many
brain:
13.1
GRINA
ENSSSCG00000032796
ENSG00000178719
Glutamate ionotropic receptor NMDA type subunit associated protein 1
Tissue enhanced
Detected in all
testis:
99.3
GSDME
ENSSSCG00000016716
ENSG00000105928
Gasdermin E
Tissue enhanced
Detected in many
choroid plexus:
22.5
GSTA4
ENSSSCG00000002627
ENSG00000170899
Glutathione S-transferase A4
Tissue enhanced
Detected in many
brain:
43.4
lens:
47.1
pineal gland:
36.6
H2AFY2
ENSSSCG00000031713
ENSG00000099284
H2A histone family member Y2
Tissue enhanced
Detected in many
pituitary gland:
15.8
thyroid gland:
21.5
HABP4
ENSSSCG00000035956
ENSG00000130956
Intracellular hyaluronan-binding protein 4
Tissue enhanced
Detected in all
testis:
42.0
HCN2
ENSSSCG00000033442
ENSG00000099822
Hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2
Tissue enriched
Detected in many
brain:
31.1
HDAC11
ENSSSCG00000028031
ENSG00000163517
Histone deacetylase 11
Group enriched
Detected in all
brain:
25.1
testis:
82.3
HDGFL3
ENSSSCG00000035432
ENSG00000166503
HDGF like 3
Low tissue specificity
Detected in all
HEPACAM
ENSSSCG00000015205
ENSG00000165478
Hepatic and glial cell adhesion molecule
Tissue enhanced
Detected in all
pituitary gland:
137.0
HEY1
ENSSSCG00000006159
ENSG00000164683
Hes related family bHLH transcription factor with YRPW motif 1
Low tissue specificity
Detected in all
HHIP
ENSSSCG00000009045
ENSG00000164161
Hedgehog interacting protein
Tissue enhanced
Detected in many
cartilage:
79.0
lymphoid tissue:
59.2
HLF
ENSSSCG00000017604
ENSG00000108924
HLF, PAR bZIP transcription factor
Tissue enhanced
Detected in all
cornea:
85.6
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