We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
826 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 17 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
SNX22
ENSSSCG00000037275
ENSG00000157734
Sorting nexin 22
Group enriched
Detected in many
brain:
30.6
lens:
8.0
male glands:
24.2
thyroid gland:
25.0
SNX24
ENSSSCG00000039373
ENSG00000064652
Sorting nexin 24
Tissue enhanced
Detected in all
lens:
54.5
SNX32
ENSSSCG00000012975
ENSG00000172803
Sorting nexin 32
Low tissue specificity
Detected in many
SORT1
ENSSSCG00000006831
ENSG00000134243
Sortilin 1
Tissue enhanced
Detected in many
brain:
52.0
epididymis:
50.6
SOX1
ENSSSCG00000038835
ENSG00000182968
SRY-box 1
Tissue enriched
Detected in some
lens:
27.9
SOX2
ENSSSCG00000037485
ENSG00000181449
Transcription factor SOX-2
Tissue enhanced
Detected in some
brain:
34.9
lens:
38.2
upper respiratory system:
15.2
SOX3
ENSSSCG00000022501
ENSG00000134595
SRY-box 3
Group enriched
Detected in some
brain:
7.4
lens:
14.3
pituitary gland:
5.7
vagus nerve:
5.3
SPAG9
ENSSSCG00000033228
ENSG00000008294
Sperm associated antigen 9
Low tissue specificity
Detected in all
SPATA2
ENSSSCG00000033324
ENSG00000158480
Spermatogenesis associated 2
Low tissue specificity
Detected in all
SPIN3
ENSSSCG00000032692
ENSG00000204271
Spindlin family member 3
Low tissue specificity
Detected in all
SPIN4
ENSSSCG00000036647
ENSG00000186767
Spindlin family member 4
Tissue enhanced
Detected in many
brain:
7.4
SPINK7
ENSSSCG00000022035
ENSG00000145879
Serine peptidase inhibitor, Kazal type 7 (putative)
Tissue enhanced
Detected in many
male glands:
22.2
testis:
40.7
SPIRE1
ENSSSCG00000039769
ENSG00000134278
Spire type actin nucleation factor 1
Low tissue specificity
Detected in all
SPOCK1
ENSSSCG00000032423
ENSG00000152377
SPARC/osteonectin, cwcv and kazal like domains proteoglycan 1
Group enriched
Detected in many
brain:
71.0
pineal gland:
53.0
SPRYD3
ENSSSCG00000000262
ENSG00000167778
SPRY domain-containing protein 3
Low tissue specificity
Detected in all
SRCIN1
ENSSSCG00000018056
ENSG00000277363
SRC kinase signaling inhibitor 1
Group enriched
Detected in many
brain:
42.1
skin:
49.3
SRPK2
ENSSSCG00000026110
ENSG00000135250
SRSF protein kinase 2
Tissue enhanced
Detected in all
testis:
64.4
SRSF12
ENSSSCG00000032781
ENSG00000154548
Serine/arginine-rich splicing factor 12
Tissue enhanced
Detected in all
pineal gland:
31.4
ST18
ENSSSCG00000006266
ENSG00000147488
ST18, C2H2C-type zinc finger
Tissue enriched
Detected in some
brain:
41.0
ST6GALNAC3
ENSSSCG00000024494
ENSG00000184005
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
Group enriched
Detected in many
brain:
25.7
cornea:
24.7
ST8SIA5
ENSSSCG00000032053
ENSG00000101638
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
Tissue enhanced
Detected in all
adrenal gland:
26.0
brain:
43.6
choroid plexus:
29.2
STAM
ENSSSCG00000011036
ENSG00000136738
Signal transducing adaptor molecule
Low tissue specificity
Detected in all
STMN4
ENSSSCG00000009662
ENSG00000015592
Stathmin 4
Tissue enriched
Detected in some
brain:
106.0
STX12
ENSSSCG00000024927
ENSG00000117758
Syntaxin-12
Low tissue specificity
Detected in all
SYBU
ENSSSCG00000006023
ENSG00000147642
Syntabulin
Tissue enhanced
Detected in many
brain:
49.8
SYCN
ENSSSCG00000021959
ENSG00000179751
Syncollin
Group enriched
Detected in some
adipose tissue:
4.3
brain:
4.3
ovary:
7.5
SYNGR1
ENSSSCG00000020873
ENSG00000100321
Synaptogyrin-1
Tissue enhanced
Detected in all
brain:
44.1
SYT11
ENSSSCG00000006506
ENSG00000132718
Synaptotagmin 11
Tissue enhanced
Detected in many
brain:
65.9
pineal gland:
17.5
SYT6
ENSSSCG00000006758
ENSG00000134207
Synaptotagmin 6
Tissue enriched
Detected in some
brain:
25.2
TACR3
ENSSSCG00000009160
ENSG00000169836
Tachykinin receptor 3
Tissue enhanced
Detected in many
fallopian tube:
25.0
ovary:
10.9
pituitary gland:
11.8
TAF7L
ENSSSCG00000012493
ENSG00000102387
TATA-box binding protein associated factor 7 like
Group enriched
Detected in some
brain:
6.1
testis:
23.4
TBC1D19
ENSSSCG00000008761
ENSG00000109680
TBC1 domain family member 19
Tissue enhanced
Detected in all
lens:
29.6
lymphoid tissue:
27.8
TBC1D32
ENSSSCG00000004242
ENSG00000146350
TBC1 domain family member 32
Tissue enhanced
Detected in all
brain:
30.9
TCAF1
ENSSSCG00000016453
ENSG00000198420
TRPM8 channel associated factor 1
Low tissue specificity
Detected in all
TCEAL9
ENSSSCG00000012527
ENSG00000185222
Transcription elongation factor A like 9
Tissue enhanced
Detected in many
pineal gland:
21.2
pituitary gland:
35.7
TEX2
ENSSSCG00000017278
ENSG00000136478
Testis expressed 2
Tissue enhanced
Detected in all
testis:
93.8
TF
ENSSSCG00000011640
ENSG00000091513
Serotransferrin precursor
Group enriched
Detected in some
brain:
181.5
liver:
347.8
TIMM22
ENSSSCG00000017803
ENSG00000177370
Translocase of inner mitochondrial membrane 22
Low tissue specificity
Detected in all
TM7SF2
ENSSSCG00000013004
ENSG00000149809
Transmembrane 7 superfamily member 2
Group enriched
Detected in many
brain:
19.5
liver:
75.8
ovary:
61.1
vagus nerve:
19.7
TMCC2
ENSSSCG00000015287
ENSG00000133069
Transmembrane and coiled-coil domain family 2
Tissue enhanced
Detected in all
lens:
35.9
TMEFF2
ENSSSCG00000016064
ENSG00000144339
Transmembrane protein with EGF like and two follistatin like domains 2
Tissue enriched
Detected in many
brain:
33.4
TMEM108
ENSSSCG00000011635
ENSG00000144868
Transmembrane protein 108
Tissue enhanced
Detected in many
choroid plexus:
21.1
lens:
17.7
pineal gland:
20.2
retina:
26.8
TMEM121
ENSSSCG00000037022
ENSG00000184986
Transmembrane protein 121
Tissue enhanced
Detected in many
brain:
11.5
vagus nerve:
11.3
TMEM136
ENSSSCG00000037406
ENSG00000181264
Transmembrane protein 136
Tissue enhanced
Detected in many
retina:
36.6
TMEM151A
ENSSSCG00000012952
ENSG00000179292
Transmembrane protein 151A
Tissue enhanced
Detected in many
brain:
30.6
mesothelial tissue:
12.6
TMEM170B
ENSSSCG00000037420
ENSG00000205269
Transmembrane protein 170B
Low tissue specificity
Detected in all
TMEM200C
ENSSSCG00000039627
ENSG00000206432
Transmembrane protein 200C
Tissue enhanced
Detected in many
ductus deferens:
17.8
lens:
27.1
pineal gland:
22.1
TMEM218
ENSSSCG00000029492
ENSG00000150433
Transmembrane protein 218
Low tissue specificity
Detected in all
TMEM229A
ENSSSCG00000016600
ENSG00000234224
Transmembrane protein 229A
Tissue enhanced
Detected in some
brain:
15.1
ovary:
25.4
TMEM74B
ENSSSCG00000035262
ENSG00000125895
Transmembrane protein 74B
Tissue enhanced
Detected in some
brain:
9.8
« prev
| Page
of 17 |
next »