We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
826 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 17 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
PODXL2
ENSSSCG00000021397
ENSG00000114631
Podocalyxin like 2
Tissue enhanced
Detected in many
brain:
24.9
pineal gland:
18.5
POLR3B
ENSSSCG00000000169
ENSG00000013503
RNA polymerase III subunit B
Tissue enhanced
Detected in all
testis:
60.2
POMK
ENSSSCG00000031510
ENSG00000185900
Protein-O-mannose kinase
Low tissue specificity
Detected in all
POU3F2
ENSSSCG00000004346
ENSG00000184486
POU class 3 homeobox 2
Group enriched
Detected in some
brain:
9.1
vagus nerve:
22.7
POU3F3
ENSSSCG00000022096
ENSG00000198914
POU class 3 homeobox 3
Tissue enhanced
Detected in some
epididymis:
29.3
kidney:
28.5
male glands:
66.6
POU3F4
ENSSSCG00000012454
ENSG00000196767
POU class 3 homeobox 4
Tissue enriched
Detected in some
brain:
10.6
PPEF1
ENSSSCG00000030274
ENSG00000086717
Protein phosphatase with EF-hand domain 1
Group enriched
Detected in many
brain:
37.4
testis:
15.5
PPM1L
ENSSSCG00000023434
ENSG00000163590
Protein phosphatase, Mg2+/Mn2+ dependent 1L
Tissue enhanced
Detected in many
skeletal muscle:
36.8
PPP1R3F
ENSSSCG00000022584
ENSG00000049769
Protein phosphatase 1 regulatory subunit 3F
Tissue enhanced
Detected in many
brain:
12.0
PPP1R9A
ENSSSCG00000015329
ENSG00000158528
Protein phosphatase 1 regulatory subunit 9A
Low tissue specificity
Detected in many
PPP2R2B
ENSSSCG00000028976
ENSG00000156475
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform
Tissue enhanced
Detected in many
brain:
38.4
cornea:
32.3
lens:
62.1
retina:
33.4
PPP2R5B
ENSSSCG00000013016
ENSG00000068971
Protein phosphatase 2 regulatory subunit B'beta
Low tissue specificity
Detected in all
PPP4R4
ENSSSCG00000002474
ENSG00000119698
Protein phosphatase 4 regulatory subunit 4
Tissue enhanced
Detected in many
brain:
32.8
epididymis:
41.9
testis:
29.0
PRELID3A
ENSSSCG00000036781
ENSG00000141391
PRELI domain containing 3A
Tissue enhanced
Detected in all
brain:
14.4
PRKCA
ENSSSCG00000017268
ENSG00000154229
Protein kinase C alpha
Tissue enhanced
Detected in all
brain:
40.2
vagus nerve:
44.0
PRR3
ENSSSCG00000025892
ENSG00000204576
Proline rich 3
Low tissue specificity
Detected in all
PRR7
ENSSSCG00000040698
ENSG00000131188
Proline rich 7, synaptic
Tissue enriched
Detected in many
lens:
53.2
PRTG
ENSSSCG00000035798
ENSG00000166450
Protogenin
Tissue enhanced
Detected in many
thyroid gland:
14.6
PSAT1
ENSSSCG00000005287
ENSG00000135069
Phosphoserine aminotransferase 1
Tissue enhanced
Detected in many
brain:
65.4
PSD2
ENSSSCG00000029541
ENSG00000146005
Pleckstrin and Sec7 domain containing 2
Tissue enhanced
Detected in many
brain:
30.4
epididymis:
29.1
PSD3
ENSSSCG00000007034
ENSG00000156011
Pleckstrin and Sec7 domain containing 3
Tissue enhanced
Detected in all
brain:
44.7
PTCHD1
ENSSSCG00000032433
ENSG00000165186
Patched domain containing 1
Tissue enhanced
Detected in many
brain:
17.8
cartilage:
11.7
smooth muscle:
26.4
PTGDS
ENSSSCG00000040080
Prostaglandin-H2 D-isomerase precursor
Tissue enhanced
Detected in many
brain:
33.6
cornea:
21.9
ductus deferens:
33.4
PTH
ENSSSCG00000013394
ENSG00000152266
Parathyroid hormone
Tissue enhanced
Detected in many
brain:
5.7
PTN
ENSSSCG00000016522
ENSG00000105894
Pleiotrophin
Tissue enhanced
Detected in many
brain:
68.8
dura mater:
88.3
gallbladder:
116.6
PTPRA
ENSSSCG00000007166
ENSG00000132670
Receptor-type tyrosine-protein phosphatase alpha precursor
Tissue enhanced
Detected in all
lens:
98.1
PTPRD
ENSSSCG00000005194
ENSG00000153707
Protein tyrosine phosphatase, receptor type D
Tissue enhanced
Detected in many
brain:
50.8
cartilage:
34.8
kidney:
38.0
PTPRO
ENSSSCG00000000601
ENSG00000151490
Protein tyrosine phosphatase, receptor type O
Tissue enriched
Detected in some
lens:
86.9
PTPRZ1
ENSSSCG00000016614
ENSG00000106278
Protein tyrosine phosphatase, receptor type Z1
Group enriched
Detected in many
brain:
43.9
pineal gland:
11.4
PURG
ENSSSCG00000038933
ENSG00000172733
Purine rich element binding protein G
Tissue enhanced
Detected in all
pineal gland:
45.6
PYGB
ENSSSCG00000022815
ENSG00000100994
Glycogen phosphorylase B
Tissue enhanced
Detected in many
cervix:
45.8
heart:
104.4
R3HDML
ENSSSCG00000007370
ENSG00000101074
R3H domain containing like
Tissue enriched
Detected in some
lens:
65.8
RAB33A
ENSSSCG00000012658
ENSG00000134594
Ras-related protein Rab-33A
Tissue enhanced
Detected in all
brain:
18.0
RAB39A
ENSSSCG00000031723
ENSG00000179331
RAB39A, member RAS oncogene family
Tissue enriched
Detected in all
lens:
54.9
RALGPS1
ENSSSCG00000005607
ENSG00000136828
Ral GEF with PH domain and SH3 binding motif 1
Low tissue specificity
Detected in all
RAP1GDS1
ENSSSCG00000022353
ENSG00000138698
Rap1 GTPase-GDP dissociation stimulator 1
Low tissue specificity
Detected in all
RCAN2
ENSSSCG00000001716
ENSG00000172348
Regulator of calcineurin 2
Tissue enriched
Detected in many
lens:
184.3
RDH5
ENSSSCG00000000362
ENSG00000135437
Retinol dehydrogenase 5
Tissue enhanced
Detected in many
adipose tissue:
26.7
aorta:
30.2
brain:
23.6
choroid plexus:
16.3
REEP1
ENSSSCG00000023710
ENSG00000068615
Receptor accessory protein 1
Tissue enhanced
Detected in many
brain:
26.5
lens:
63.7
REEP2
ENSSSCG00000014335
ENSG00000132563
Receptor accessory protein 2
Tissue enhanced
Detected in all
lens:
152.3
testis:
49.9
RHBDD2
ENSSSCG00000040182
ENSG00000005486
Rhomboid domain containing 2
Tissue enhanced
Detected in all
brain:
39.2
RHBDL1
ENSSSCG00000007998
ENSG00000103269
Rhomboid like 1
Low tissue specificity
Detected in all
RIC8B
ENSSSCG00000000167
ENSG00000111785
RIC8 guanine nucleotide exchange factor B
Low tissue specificity
Detected in all
RIMKLA
ENSSSCG00000003968
ENSG00000177181
Ribosomal modification protein rimK like family member A
Tissue enhanced
Detected in many
brain:
16.0
lens:
8.9
mouth:
8.9
retina:
8.9
RIMKLB
ENSSSCG00000000665
ENSG00000166532
Ribosomal modification protein rimK like family member B
Tissue enhanced
Detected in all
lens:
52.0
RIMS1
ENSSSCG00000004280
ENSG00000079841
Regulating synaptic membrane exocytosis 1
Tissue enhanced
Detected in many
brain:
171.7
lens:
92.5
RNASE1
ENSSSCG00000031649
ENSG00000129538
Ribonuclease pancreatic precursor
Tissue enhanced
Detected in many
brain:
72.9
stomach:
33.9
RND2
ENSSSCG00000029460
ENSG00000108830
Rho family GTPase 2
Tissue enriched
Detected in all
brain:
38.0
RNF128
ENSSSCG00000012551
ENSG00000133135
Ring finger protein 128, E3 ubiquitin protein ligase
Tissue enhanced
Detected in many
brain:
45.6
pineal gland:
28.0
RNF180
ENSSSCG00000016941
ENSG00000164197
Ring finger protein 180
Tissue enhanced
Detected in all
heart:
25.4
lens:
35.2
« prev
| Page
of 17 |
next »