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Keyword
Chromosome
1
2
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7
8
9
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MT
Unmapped
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
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Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
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TISSUE SPECIFIC PROTEOME
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477 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
DNAAF1
ENSSSCG00000002675
ENSG00000154099
Dynein axonemal assembly factor 1
Tissue enriched
Detected in some
testis:
116.9
DNAH11
ENSSSCG00000015379
ENSG00000105877
Dynein axonemal heavy chain 11
Tissue enhanced
Detected in many
choroid plexus:
16.0
fallopian tube:
31.5
lung:
27.2
upper respiratory system:
22.7
DNAH7
ENSSSCG00000032814
ENSG00000118997
Dynein axonemal heavy chain 7
Tissue enhanced
Detected in some
epididymis:
16.1
fallopian tube:
27.7
testis:
17.7
upper respiratory system:
16.9
DNAI2
ENSSSCG00000024357
ENSG00000171595
Dynein axonemal intermediate chain 2
Tissue enhanced
Detected in some
choroid plexus:
13.5
fallopian tube:
27.7
lung:
12.1
testis:
25.2
upper respiratory system:
19.2
DNAJB13
ENSSSCG00000014832
ENSG00000187726
DnaJ homolog subfamily B member 13
Tissue enhanced
Detected in some
choroid plexus:
28.8
fallopian tube:
13.1
testis:
37.3
upper respiratory system:
18.2
DNALI1
ENSSSCG00000039034
ENSG00000163879
Dynein axonemal light intermediate chain 1
Tissue enhanced
Detected in many
choroid plexus:
20.5
fallopian tube:
22.6
testis:
12.2
upper respiratory system:
17.2
DPEP2
ENSSSCG00000021105
ENSG00000167261
Dipeptidase 2
Tissue enhanced
Detected in many
fallopian tube:
37.2
lung:
14.5
upper respiratory system:
24.9
DRC1
ENSSSCG00000008568
ENSG00000157856
Dynein regulatory complex subunit 1
Tissue enhanced
Detected in many
fallopian tube:
38.9
testis:
22.9
upper respiratory system:
25.4
DRC7
ENSSSCG00000002817
ENSG00000159625
Dynein regulatory complex subunit 7
Tissue enhanced
Detected in some
fallopian tube:
28.6
lung:
19.0
testis:
21.3
upper respiratory system:
26.9
DRD2
ENSSSCG00000015048
ENSG00000149295
D(2) dopamine receptor
Tissue enhanced
Detected in many
brain:
56.0
pineal gland:
16.5
pituitary gland:
32.6
DTHD1
ENSSSCG00000028471
ENSG00000197057
Death domain containing 1
Group enriched
Detected in some
brain:
21.9
fallopian tube:
54.2
lung:
17.8
upper respiratory system:
28.9
DYDC2
ENSSSCG00000010339
ENSG00000133665
DPY30 domain containing 2
Tissue enhanced
Detected in all
fallopian tube:
26.6
upper respiratory system:
26.8
DYNLRB2
ENSSSCG00000031421
ENSG00000168589
Dynein light chain roadblock-type 2
Tissue enhanced
Detected in many
choroid plexus:
44.0
fallopian tube:
41.6
upper respiratory system:
44.9
DZIP1L
ENSSSCG00000027467
ENSG00000158163
DAZ interacting zinc finger protein 1 like
Tissue enhanced
Detected in many
choroid plexus:
47.9
ECT2L
ENSSSCG00000004147
ENSG00000203734
Epithelial cell transforming 2 like
Tissue enhanced
Detected in some
choroid plexus:
9.6
fallopian tube:
31.4
lung:
8.4
upper respiratory system:
18.1
EFCAB12
ENSSSCG00000011587
ENSG00000172771
EF-hand calcium-binding domain-containing protein 12
Tissue enhanced
Detected in some
choroid plexus:
28.6
fallopian tube:
28.4
lung:
15.9
upper respiratory system:
30.7
EFHB
ENSSSCG00000011205
ENSG00000163576
EF-hand domain family member B
Tissue enhanced
Detected in some
brain:
8.9
choroid plexus:
16.8
fallopian tube:
15.3
testis:
17.7
EFHC1
ENSSSCG00000002620
ENSG00000096093
EF-hand domain containing 1
Tissue enhanced
Detected in many
choroid plexus:
26.5
fallopian tube:
34.6
testis:
36.3
upper respiratory system:
37.3
EFHC2
ENSSSCG00000021846
ENSG00000183690
EF-hand domain containing 2
Tissue enhanced
Detected in many
choroid plexus:
14.0
fallopian tube:
14.2
pineal gland:
14.1
testis:
17.9
ENKD1
ENSSSCG00000028661
ENSG00000124074
Enkurin domain containing 1
Tissue enhanced
Detected in many
upper respiratory system:
18.4
ENKUR
ENSSSCG00000032929
ENSG00000151023
Enkurin, TRPC channel interacting protein
Tissue enhanced
Detected in all
fallopian tube:
29.7
testis:
34.0
ENO4
ENSSSCG00000010664
ENSG00000188316
Enolase family member 4
Tissue enhanced
Detected in many
choroid plexus:
15.9
fallopian tube:
39.7
upper respiratory system:
23.6
ERICH6
ENSSSCG00000022706
ENSG00000163645
Glutamate rich 6
Tissue enhanced
Detected in many
testis:
27.6
FAM166B
ENSSSCG00000005309
ENSG00000215187
Protein FAM166B
Group enriched
Detected in many
fallopian tube:
46.2
upper respiratory system:
48.2
FAM173A
ENSSSCG00000008004
ENSG00000103254
Family with sequence similarity 173 member A
Low tissue specificity
Detected in all
FAM216B
ENSSSCG00000009428
ENSG00000179813
Protein FAM216B
Tissue enhanced
Detected in all
fallopian tube:
53.2
FAM57A
ENSSSCG00000017810
ENSG00000167695
Family with sequence similarity 57 member A
Tissue enhanced
Detected in all
breast:
19.9
testis:
33.0
FAM81B
ENSSSCG00000026175
ENSG00000153347
Family with sequence similarity 81 member B
Tissue enhanced
Detected in some
fallopian tube:
14.1
testis:
52.5
FAM92B
ENSSSCG00000002668
ENSG00000153789
Protein FAM92B
Tissue enhanced
Detected in many
fallopian tube:
20.8
lung:
16.2
upper respiratory system:
20.9
FANK1
ENSSSCG00000010745
ENSG00000203780
Fibronectin type III and ankyrin repeat domains 1
Tissue enhanced
Detected in many
fallopian tube:
27.3
testis:
29.2
upper respiratory system:
19.1
FBXO15
ENSSSCG00000004873
ENSG00000141665
F-box protein 15
Tissue enhanced
Detected in many
brain:
17.1
choroid plexus:
17.4
testis:
19.3
FBXO36
ENSSSCG00000016259
ENSG00000153832
F-box protein 36
Tissue enhanced
Detected in many
testis:
37.0
FBXW9
ENSSSCG00000013725
ENSG00000132004
F-box and WD repeat domain containing 9
Low tissue specificity
Detected in all
FEZF1
ENSSSCG00000031221
ENSG00000128610
FEZ family zinc finger 1
Tissue enhanced
Detected in some
brain:
10.4
pituitary gland:
3.4
upper respiratory system:
15.2
FFAR4
ENSSSCG00000010478
ENSG00000186188
Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha'
Tissue enhanced
Detected in many
adipose tissue:
16.2
upper respiratory system:
28.1
FGFR1OP
ENSSSCG00000004023
ENSG00000213066
FGFR1 oncogene partner
Tissue enriched
Detected in all
testis:
54.8
FHAD1
ENSSSCG00000003455
ENSG00000142621
Forkhead associated phosphopeptide binding domain 1
Tissue enhanced
Detected in many
epididymis:
33.5
fallopian tube:
29.7
testis:
39.1
upper respiratory system:
24.9
FOXJ1
ENSSSCG00000017187
ENSG00000129654
Forkhead box J1
Tissue enhanced
Detected in some
fallopian tube:
107.2
upper respiratory system:
81.5
FRMPD2
ENSSSCG00000010379
ENSG00000170324
FERM and PDZ domain containing 2
Tissue enhanced
Detected in some
fallopian tube:
22.7
pineal gland:
40.3
retina:
29.6
GAS2L2
ENSSSCG00000039395
ENSG00000270765
Growth arrest specific 2 like 2
Tissue enhanced
Detected in many
fallopian tube:
32.0
kidney:
15.2
upper respiratory system:
15.7
GJB7
ENSSSCG00000033562
ENSG00000164411
Gap junction protein beta 7
Tissue enhanced
Detected in many
upper respiratory system:
16.8
GLB1L2
ENSSSCG00000015258
ENSG00000149328
Galactosidase beta 1 like 2
Group enriched
Detected in many
epididymis:
120.8
thyroid gland:
84.9
GMNC
ENSSSCG00000024420
ENSG00000205835
Geminin coiled-coil domain containing
Tissue enhanced
Detected in many
choroid plexus:
27.0
GPR119
ENSSSCG00000012661
ENSG00000147262
Glucose-dependent insulinotropic receptor
Low tissue specificity
Detected in many
HYDIN
ENSSSCG00000040973
ENSG00000157423
HYDIN, axonemal central pair apparatus protein
Tissue enhanced
Detected in some
choroid plexus:
18.5
fallopian tube:
61.3
lung:
21.1
upper respiratory system:
31.1
IFN-DELTA-7
ENSSSCG00000031022
Interferon delta 7 precursor
Group enriched
Detected in some
choroid plexus:
15.1
fallopian tube:
7.0
lung:
5.8
upper respiratory system:
4.2
IFT140
ENSSSCG00000008020
ENSG00000187535
Intraflagellar transport 140
Low tissue specificity
Detected in all
IFT172
ENSSSCG00000026367
ENSG00000138002
Intraflagellar transport 172
Low tissue specificity
Detected in all
IFT27
ENSSSCG00000000139
ENSG00000100360
Intraflagellar transport 27
Low tissue specificity
Detected in all
IFT46
ENSSSCG00000029649
ENSG00000118096
Intraflagellar transport 46
Low tissue specificity
Detected in all
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