We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
477 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 10 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
CCDC153
ENSSSCG00000015109
ENSG00000248712
Coiled-coil domain containing 153
Tissue enhanced
Detected in some
brain:
7.0
fallopian tube:
16.2
lung:
6.3
pituitary gland:
8.4
upper respiratory system:
12.2
CCDC157
ENSSSCG00000010003
ENSG00000187860
Coiled-coil domain containing 157
Tissue enhanced
Detected in many
testis:
68.0
CCDC158
ENSSSCG00000008983
ENSG00000163749
Coiled-coil domain containing 158
Tissue enhanced
Detected in all
testis:
35.1
CCDC160
ENSSSCG00000031011
ENSG00000203952
Coiled-coil domain containing 160
Tissue enhanced
Detected in many
testis:
35.7
CCDC17
ENSSSCG00000021448
ENSG00000159588
Coiled-coil domain containing 17
Tissue enhanced
Detected in some
fallopian tube:
24.9
lung:
20.0
testis:
21.4
upper respiratory system:
25.7
CCDC170
ENSSSCG00000004087
ENSG00000120262
Coiled-coil domain containing 170
Tissue enhanced
Detected in all
brain:
46.3
fallopian tube:
50.8
CCDC173
ENSSSCG00000015935
ENSG00000154479
Coiled-coil domain containing 173
Tissue enhanced
Detected in many
fallopian tube:
40.6
testis:
30.4
CCDC189
ENSSSCG00000007778
ENSG00000196118
Coiled-coil domain containing 189
Tissue enhanced
Detected in many
testis:
29.2
CCDC24
ENSSSCG00000034727
ENSG00000159214
Coiled-coil domain containing 24
Low tissue specificity
Detected in all
CCDC33
ENSSSCG00000001908
ENSG00000140481
Coiled-coil domain containing 33
Tissue enriched
Detected in some
testis:
63.2
CCDC40
ENSSSCG00000017158
ENSG00000141519
Coiled-coil domain containing 40
Tissue enhanced
Detected in some
fallopian tube:
26.3
lung:
12.8
testis:
16.3
upper respiratory system:
19.8
CCDC60
ENSSSCG00000009842
ENSG00000183273
Coiled-coil domain containing 60
Tissue enhanced
Detected in many
skeletal muscle:
30.3
testis:
39.1
CCDC65
ENSSSCG00000000179
ENSG00000139537
Coiled-coil domain containing 65
Tissue enhanced
Detected in many
fallopian tube:
21.2
testis:
40.1
CCDC87
ENSSSCG00000012933
ENSG00000182791
Coiled-coil domain containing 87
Tissue enriched
Detected in many
testis:
37.6
CCDC89
ENSSSCG00000014908
ENSG00000179071
Coiled-coil domain containing 89
Group enriched
Detected in many
stomach:
26.1
testis:
40.6
CCDC96
ENSSSCG00000028085
ENSG00000173013
Coiled-coil domain containing 96
Tissue enhanced
Detected in many
testis:
37.9
upper respiratory system:
13.8
CCNA1
ENSSSCG00000009354
ENSG00000133101
Cyclin A1
Tissue enhanced
Detected in some
fallopian tube:
28.1
testis:
31.3
upper respiratory system:
27.0
CCNO
ENSSSCG00000026849
ENSG00000152669
Cyclin O
Tissue enhanced
Detected in many
lung:
7.3
upper respiratory system:
20.5
CDHR4
ENSSSCG00000011391
ENSG00000187492
Cadherin related family member 4
Group enriched
Detected in many
fallopian tube:
41.1
lung:
14.6
upper respiratory system:
25.4
CDKL3
ENSSSCG00000014302
ENSG00000006837
Cyclin dependent kinase like 3
Tissue enriched
Detected in many
testis:
42.6
CERKL
ENSSSCG00000016010
ENSG00000188452
Ceramide kinase like
Tissue enhanced
Detected in some
fallopian tube:
15.5
pineal gland:
42.1
retina:
36.9
CFAP126
ENSSSCG00000023957
ENSG00000188931
Cilia and flagella associated protein 126
Tissue enhanced
Detected in all
choroid plexus:
63.1
fallopian tube:
75.7
testis:
53.2
upper respiratory system:
71.6
CFAP157
ENSSSCG00000005618
ENSG00000160401
Cilia and flagella associated protein 157
Tissue enhanced
Detected in all
lung:
24.6
upper respiratory system:
25.9
CFAP161
ENSSSCG00000001786
ENSG00000156206
Cilia- and flagella-associated protein 161
Tissue enhanced
Detected in some
brain:
11.3
choroid plexus:
17.1
fallopian tube:
26.6
lung:
11.6
upper respiratory system:
19.7
CFAP221
ENSSSCG00000015741
ENSG00000163075
Cilia and flagella associated protein 221
Tissue enhanced
Detected in all
fallopian tube:
23.3
testis:
27.9
CFAP46
ENSSSCG00000010768
ENSG00000171811
Cilia and flagella associated protein 46
Tissue enhanced
Detected in many
fallopian tube:
37.6
lung:
31.0
testis:
19.4
CFAP52
ENSSSCG00000017994
ENSG00000166596
Cilia and flagella associated protein 52
Tissue enhanced
Detected in some
brain:
14.0
fallopian tube:
30.1
testis:
30.3
upper respiratory system:
21.2
CFAP54
ENSSSCG00000033574
ENSG00000188596
Cilia and flagella associated protein 54
Tissue enhanced
Detected in many
choroid plexus:
31.6
fallopian tube:
62.8
upper respiratory system:
24.1
CFAP57
ENSSSCG00000023904
ENSG00000243710
Cilia and flagella associated protein 57
Tissue enhanced
Detected in some
fallopian tube:
21.1
lymphoid tissue:
21.4
testis:
15.6
upper respiratory system:
14.8
CFAP58
ENSSSCG00000010614
ENSG00000120051
Cilia and flagella associated protein 58
Tissue enhanced
Detected in many
choroid plexus:
23.8
fallopian tube:
22.9
testis:
19.2
CFAP61
ENSSSCG00000038858
ENSG00000089101
Cilia and flagella associated protein 61
Tissue enhanced
Detected in some
choroid plexus:
16.5
fallopian tube:
25.0
testis:
41.2
upper respiratory system:
18.9
CFAP65
ENSSSCG00000016203
ENSG00000181378
Cilia and flagella associated protein 65
Group enriched
Detected in some
fallopian tube:
37.0
lung:
20.9
testis:
24.4
upper respiratory system:
27.7
CFAP69
ENSSSCG00000015303
ENSG00000105792
Cilia and flagella associated protein 69
Tissue enhanced
Detected in many
choroid plexus:
19.0
fallopian tube:
34.0
testis:
23.8
CFAP70
ENSSSCG00000010298
ENSG00000156042
Cilia and flagella associated protein 70
Tissue enhanced
Detected in many
fallopian tube:
28.7
testis:
53.2
CFAP73
ENSSSCG00000009875
ENSG00000186710
Cilia and flagella associated protein 73
Tissue enhanced
Detected in some
choroid plexus:
10.2
fallopian tube:
27.9
lung:
12.1
upper respiratory system:
22.7
CFAP74
ENSSSCG00000030513
ENSG00000142609
Cilia and flagella associated protein 74
Tissue enhanced
Detected in many
kidney:
23.9
lung:
25.6
CFAP77
ENSSSCG00000005727
ENSG00000188523
Cilia and flagella associated protein 77
Tissue enhanced
Detected in all
fallopian tube:
26.7
upper respiratory system:
19.9
CIB3
ENSSSCG00000013854
ENSG00000141977
Calcium and integrin binding family member 3
Tissue enhanced
Detected in many
choroid plexus:
9.3
testis:
9.1
CLBA1
ENSSSCG00000040365
ENSG00000140104
Clathrin binding box of aftiphilin containing 1
Tissue enhanced
Detected in all
testis:
27.5
CLHC1
ENSSSCG00000008402
ENSG00000162994
Clathrin heavy chain linker domain containing 1
Tissue enhanced
Detected in many
fallopian tube:
36.3
CLIC6
ENSSSCG00000028112
ENSG00000159212
Chloride intracellular channel 6
Tissue enriched
Detected in some
choroid plexus:
192.2
CLRN2
ENSSSCG00000023941
ENSG00000249581
Clarin 2
Tissue enhanced
Detected in some
brain:
1.1
lung:
1.8
CNGA3
ENSSSCG00000027113
ENSG00000144191
Cyclic nucleotide gated channel alpha 3
Tissue enhanced
Detected in many
retina:
15.1
skin:
20.3
smooth muscle:
19.4
CROCC2
ENSSSCG00000036261
ENSG00000226321
Ciliary rootlet coiled-coil, rootletin family member 2
Tissue enhanced
Detected in many
adipose tissue:
27.6
fallopian tube:
21.7
lung:
13.6
upper respiratory system:
16.7
CSN3
ENSSSCG00000009267
ENSG00000171209
Kappa-casein precursor
Tissue enriched
Detected in some
breast:
55.6
DAW1
ENSSSCG00000016255
ENSG00000123977
Dynein assembly factor with WD repeats 1
Tissue enhanced
Detected in some
choroid plexus:
39.1
fallopian tube:
37.7
testis:
56.0
DCDC1
ENSSSCG00000013326
ENSG00000170959
Doublecortin domain containing 1
Tissue enhanced
Detected in many
cornea:
50.0
fallopian tube:
24.3
DEUP1
ENSSSCG00000014943
ENSG00000165325
Deuterosome assembly protein 1
Tissue enhanced
Detected in many
fallopian tube:
18.7
testis:
51.4
DLEC1
ENSSSCG00000011249
ENSG00000008226
Deleted in lung and esophageal cancer 1
Tissue enhanced
Detected in many
fallopian tube:
22.8
retina:
23.7
DMRTA2
ENSSSCG00000030552
ENSG00000142700
DMRT like family A2
Tissue enhanced
Detected in some
choroid plexus:
15.3
cornea:
52.8
lens:
12.0
pituitary gland:
15.2
upper respiratory system:
13.8
« prev
| Page
of 10 |
next »