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Human disease related genes
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Keyword
Chromosome
1
2
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7
8
9
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
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Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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836 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
DGCR2
ENSSSCG00000010111
ENSG00000070413
DiGeorge syndrome critical region gene 2
Low tissue specificity
Detected in all
DHRS7
ENSSSCG00000005083
ENSG00000100612
Dehydrogenase/reductase SDR family member 7
Low tissue specificity
Detected in all
DHRS7B
ENSSSCG00000031802
ENSG00000109016
Dehydrogenase/reductase 7B
Low tissue specificity
Detected in all
DIABLO
ENSSSCG00000009799
ENSG00000184047,ENSG00000284934
Diablo homolog, mitochondrial
Tissue enhanced
Detected in all
testis:
78.6
DIRC2
ENSSSCG00000036766
ENSG00000138463
Disrupted in renal carcinoma 2
Low tissue specificity
Detected in all
DLAT
ENSSSCG00000015030
ENSG00000150768
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial precursor
Low tissue specificity
Detected in all
DLD
ENSSSCG00000015443
ENSG00000091140
Dihydrolipoyl dehydrogenase, mitochondrial precursor
Tissue enhanced
Detected in all
skeletal muscle:
65.7
DNAJA3
ENSSSCG00000022874
ENSG00000103423
DnaJ heat shock protein family (Hsp40) member A3
Low tissue specificity
Detected in all
DNAJC19
ENSSSCG00000011770
ENSG00000205981
Mitochondrial import inner membrane translocase subunit TIM14
Low tissue specificity
Detected in all
DNPEP
ENSSSCG00000016220
ENSG00000123992
Aspartyl aminopeptidase
Tissue enhanced
Detected in all
testis:
71.0
DOHH
ENSSSCG00000013478
ENSG00000129932
Deoxyhypusine hydroxylase
Low tissue specificity
Detected in all
DOK4
ENSSSCG00000029165
ENSG00000125170
Docking protein 4
Tissue enriched
Detected in all
lens:
53.0
DOLK
ENSSSCG00000005666
ENSG00000175283
Dolichol kinase
Low tissue specificity
Detected in all
DPF3
ENSSSCG00000002333
ENSG00000205683
Double PHD fingers 3
Tissue enhanced
Detected in many
brain:
29.0
liver:
32.4
DPY19L1
ENSSSCG00000027063
ENSG00000173852
Dpy-19 like C-mannosyltransferase 1
Low tissue specificity
Detected in all
DRAP1
ENSSSCG00000012965
ENSG00000175550
DR1 associated protein 1
Low tissue specificity
Detected in all
DTWD1
ENSSSCG00000004647
ENSG00000104047
DTW domain containing 1
Low tissue specificity
Detected in all
DUSP23
ENSSSCG00000033585
ENSG00000158716
Dual specificity phosphatase 23
Low tissue specificity
Detected in all
DXO
ENSSSCG00000001425
ENSG00000204348
Decapping and exoribonuclease protein
Low tissue specificity
Detected in all
DYM
ENSSSCG00000004508
ENSG00000141627
Dymeclin
Low tissue specificity
Detected in all
DYNLT1
ENSSSCG00000033107
ENSG00000146425
Dynein light chain Tctex-type 1
Tissue enhanced
Detected in all
male glands:
52.6
EBP
ENSSSCG00000032768
ENSG00000147155
3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase
Tissue enhanced
Detected in all
liver:
53.4
ovary:
47.3
EBPL
ENSSSCG00000009393
ENSG00000123179
Emopamil binding protein like
Tissue enhanced
Detected in all
lens:
27.8
ECH1
ENSSSCG00000028943
ENSG00000104823
Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial
Low tissue specificity
Detected in all
ECHDC1
ENSSSCG00000004216
ENSG00000093144
Ethylmalonyl-CoA decarboxylase 1
Tissue enhanced
Detected in all
liver:
44.8
skin:
40.8
ECPAS
ENSSSCG00000005459
ENSG00000136813
Ecm29 proteasome adaptor and scaffold
Low tissue specificity
Detected in all
ECSIT
ENSSSCG00000013615
ENSG00000130159
ECSIT signalling integrator
Tissue enhanced
Detected in all
heart:
50.5
skeletal muscle:
54.1
EDEM3
ENSSSCG00000015566
ENSG00000116406
ER degradation enhancing alpha-mannosidase like protein 3
Tissue enhanced
Detected in all
male glands:
85.7
salivary gland:
55.5
EDF1
ENSSSCG00000038203
ENSG00000107223
Endothelial differentiation related factor 1
Low tissue specificity
Detected in all
EIF1
ENSSSCG00000017430
ENSG00000173812
Eukaryotic translation initiation factor 1
Low tissue specificity
Detected in all
EIF2AK1
ENSSSCG00000007592
ENSG00000086232
Eukaryotic translation initiation factor 2 alpha kinase 1
Low tissue specificity
Detected in all
EIF3E
ENSSSCG00000006033
ENSG00000104408
Eukaryotic translation initiation factor 3 subunit E
Low tissue specificity
Detected in all
EIF3H
ENSSSCG00000006016
ENSG00000147677
Eukaryotic translation initiation factor 3 subunit H
Low tissue specificity
Detected in all
ELMOD3
ENSSSCG00000008238
ENSG00000115459
ELMO domain containing 3
Tissue enhanced
Detected in all
adipose tissue:
80.9
ELOF1
ENSSSCG00000013613
ENSG00000130165
Elongation factor 1 homolog
Tissue enriched
Detected in all
testis:
130.2
ELOVL5
ENSSSCG00000024149
ENSG00000012660
ELOVL fatty acid elongase 5
Tissue enhanced
Detected in all
adipose tissue:
86.4
EMC10
ENSSSCG00000039372
ENSG00000161671
ER membrane protein complex subunit 10
Low tissue specificity
Detected in all
EMC6
ENSSSCG00000017867
ENSG00000127774
ER membrane protein complex subunit 6
Low tissue specificity
Detected in all
EMC8
ENSSSCG00000029403
ENSG00000131148
ER membrane protein complex subunit 8
Low tissue specificity
Detected in all
EMC9
ENSSSCG00000002005
ENSG00000100908
ER membrane protein complex subunit 9
Tissue enhanced
Detected in all
skeletal muscle:
34.4
EMG1
ENSSSCG00000026812
ENSG00000126749
Ribosomal RNA small subunit methyltransferase NEP1
Low tissue specificity
Detected in all
ERAL1
ENSSSCG00000017776
ENSG00000132591
Era like 12S mitochondrial rRNA chaperone 1
Low tissue specificity
Detected in all
ERGIC3
ENSSSCG00000034045
ENSG00000125991
ERGIC and golgi 3
Low tissue specificity
Detected in all
ETFA
ENSSSCG00000001862
ENSG00000140374
Electron transfer flavoprotein subunit alpha, mitochondrial
Low tissue specificity
Detected in all
ETFB
ENSSSCG00000003229
ENSG00000105379
Electron transfer flavoprotein subunit beta
Low tissue specificity
Detected in all
ETV2
ENSSSCG00000002906
ENSG00000105672
ETS variant 2
Low tissue specificity
Detected in all
FABP3
ENSSSCG00000036883
ENSG00000121769
Fatty acid-binding protein, heart
Tissue enhanced
Detected in many
heart:
63.9
skeletal muscle:
53.6
FAHD1
ENSSSCG00000039715
ENSG00000180185
Fumarylacetoacetate hydrolase domain containing 1
Tissue enhanced
Detected in all
lens:
57.6
FAM162A
ENSSSCG00000026990
ENSG00000114023
Protein FAM162A
Tissue enhanced
Detected in all
skeletal muscle:
58.8
FAM210A
ENSSSCG00000030438
ENSG00000177150
Family with sequence similarity 210 member A
Low tissue specificity
Detected in all
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