We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
836 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 17 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
SLC16A1
ENSSSCG00000006771
ENSG00000155380
Monocarboxylate transporter 1
Tissue enhanced
Detected in many
large intestine:
76.4
SLC25A17
ENSSSCG00000000072
ENSG00000100372
Solute carrier family 25 member 17
Low tissue specificity
Detected in all
SLC25A20
ENSSSCG00000011366
ENSG00000178537
Solute carrier family 25 member 20
Low tissue specificity
Detected in all
SLC25A21
ENSSSCG00000039317
ENSG00000183032
Solute carrier family 25 member 21
Tissue enhanced
Detected in many
liver:
17.3
thyroid gland:
29.1
SLC25A26
ENSSSCG00000011498
ENSG00000144741
Solute carrier family 25 member 26
Tissue enhanced
Detected in all
male glands:
38.8
SLC25A3
ENSSSCG00000000886
ENSG00000075415
Phosphate carrier protein, mitochondrial
Low tissue specificity
Detected in all
SLC25A39
ENSSSCG00000030167
ENSG00000013306
Solute carrier family 25 member 39
Tissue enhanced
Detected in all
adrenal gland:
135.2
SLC35F6
ENSSSCG00000008562
ENSG00000213699
Solute carrier family 35 member F6
Low tissue specificity
Detected in all
SLC41A1
ENSSSCG00000020783
ENSG00000133065
Solute carrier family 41 member 1
Tissue enhanced
Detected in all
choroid plexus:
49.1
heart:
105.7
male glands:
64.7
SLC46A1
ENSSSCG00000023478
ENSG00000076351
Solute carrier family 46, member 1
Tissue enhanced
Detected in all
kidney:
37.1
SLIRP
ENSSSCG00000028167
ENSG00000119705
SRA stem-loop-interacting RNA-binding protein, mitochondrial
Tissue enhanced
Detected in all
lens:
62.0
SMAD4
ENSSSCG00000004524
ENSG00000141646
Mothers against decapentaplegic homolog 4
Low tissue specificity
Detected in all
SMDT1
ENSSSCG00000020945
ENSG00000183172
Single-pass membrane protein with aspartate rich tail 1
Low tissue specificity
Detected in all
SMIM20
ENSSSCG00000040571
ENSG00000250317
Small integral membrane protein 20
Low tissue specificity
Detected in all
SMIM37
ENSSSCG00000036582
ENSG00000175701
Small integral membrane protein 37
Tissue enhanced
Detected in all
skeletal muscle:
64.4
SMIM4
ENSSSCG00000034529
ENSG00000168273
Small integral membrane protein 4
Tissue enhanced
Detected in all
lens:
61.2
SMPD1
ENSSSCG00000014627
ENSG00000166311
Sphingomyelin phosphodiesterase 1
Low tissue specificity
Detected in all
SMYD2
ENSSSCG00000015583
ENSG00000143499
N-lysine methyltransferase SMYD2
Tissue enhanced
Detected in all
skeletal muscle:
37.1
SNF8
ENSSSCG00000021461
ENSG00000159210
SNF8, ESCRT-II complex subunit
Low tissue specificity
Detected in all
SNUPN
ENSSSCG00000001877
ENSG00000169371
Snurportin 1
Low tissue specificity
Detected in all
SNX17
ENSSSCG00000025363
ENSG00000115234
Sorting nexin 17
Low tissue specificity
Detected in all
SOD2
ENSSSCG00000040317
ENSG00000112096,ENSG00000285441
Superoxide dismutase
Tissue enhanced
Detected in all
heart:
69.9
SPART
ENSSSCG00000024635
ENSG00000133104
Spartin
Tissue enhanced
Detected in all
lens:
64.6
SPG7
ENSSSCG00000024756
ENSG00000197912
SPG7, paraplegin matrix AAA peptidase subunit
Low tissue specificity
Detected in all
SPNS1
ENSSSCG00000007809
ENSG00000169682
Protein spinster homolog 1
Low tissue specificity
Detected in all
SS18L2
ENSSSCG00000027711
ENSG00000008324
SS18 like 2
Tissue enhanced
Detected in all
male glands:
50.3
STARD7
ENSSSCG00000008132
ENSG00000084090
StAR related lipid transfer domain containing 7
Tissue enhanced
Detected in all
heart:
43.2
retina:
36.7
STOML2
ENSSSCG00000039782
ENSG00000165283
Stomatin like 2
Low tissue specificity
Detected in all
STRADB
ENSSSCG00000031271
ENSG00000082146
STE20-related kinase adaptor beta
Tissue enhanced
Detected in all
heart:
62.5
skeletal muscle:
62.5
STUB1
ENSSSCG00000008008
ENSG00000103266
STIP1 homology and U-box containing protein 1
Tissue enhanced
Detected in all
lens:
87.4
STX5
ENSSSCG00000026293
ENSG00000162236
Syntaxin-5
Group enriched
Detected in many
cartilage:
18.5
lens:
32.2
male glands:
55.3
SUCLA2
ENSSSCG00000009405
ENSG00000136143
Succinate-CoA ligase ADP-forming beta subunit
Tissue enhanced
Detected in all
skeletal muscle:
69.3
SUCLG1
ENSSSCG00000008247
ENSG00000163541
Succinate--CoA ligase
Tissue enhanced
Detected in all
skeletal muscle:
114.4
SUOX
ENSSSCG00000000376
ENSG00000139531
Sulfite oxidase, mitochondrial
Low tissue specificity
Detected in all
SUPT4H1
ENSSSCG00000034752
ENSG00000213246
SPT4 homolog, DSIF elongation factor subunit
Tissue enhanced
Detected in all
male glands:
50.0
SURF1
ENSSSCG00000035727
ENSG00000148290
SURF1, cytochrome c oxidase assembly factor
Low tissue specificity
Detected in all
SURF2
ENSSSCG00000038459
ENSG00000148291
Surfeit 2
Low tissue specificity
Detected in all
TADA3
ENSSSCG00000011551
ENSG00000171148
Transcriptional adapter 3
Low tissue specificity
Detected in all
TANGO2
ENSSSCG00000010134
ENSG00000183597
Transport and golgi organization 2 homolog
Tissue enhanced
Detected in all
lens:
67.3
TARBP2
ENSSSCG00000000276
ENSG00000139546
TARBP2, RISC loading complex RNA binding subunit
Low tissue specificity
Detected in all
TCTA
ENSSSCG00000037459
ENSG00000145022
T cell leukemia translocation altered
Low tissue specificity
Detected in all
TFDP2
ENSSSCG00000037647
ENSG00000114126
Transcription factor Dp-2
Tissue enhanced
Detected in all
lymphoid tissue:
47.7
TFRC
ENSSSCG00000011848
ENSG00000072274
Transferrin receptor protein 1
Low tissue specificity
Detected in all
TGIF2-C20orf24
ENSSSCG00000039201
ENSG00000259399
TGIF2-C20orf24 readthrough
Low tissue specificity
Detected in all
THAP11
ENSSSCG00000002769
ENSG00000168286
THAP domain-containing protein 11
Low tissue specificity
Detected in all
THAP7
ENSSSCG00000033301
ENSG00000184436
THAP domain containing 7
Low tissue specificity
Detected in all
TIGD5
ENSSSCG00000040119
ENSG00000179886
Tigger transposable element derived 5
Low tissue specificity
Detected in all
TIMM13
ENSSSCG00000022757
ENSG00000099800
Translocase of inner mitochondrial membrane 13
Low tissue specificity
Detected in all
TIMM17B
ENSSSCG00000022647
ENSG00000126768
Translocase of inner mitochondrial membrane 17B
Low tissue specificity
Detected in all
TIMM44
ENSSSCG00000013591
ENSG00000104980
Translocase of inner mitochondrial membrane 44
Low tissue specificity
Detected in all
« prev
| Page
of 17 |
next »
MENU
