We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
836 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 17 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
POLDIP2
ENSSSCG00000028920
ENSG00000004142
DNA polymerase delta interacting protein 2
Tissue enhanced
Detected in all
heart:
69.0
POLE4
ENSSSCG00000038307
ENSG00000115350
DNA polymerase epsilon 4, accessory subunit
Tissue enhanced
Detected in all
male glands:
69.3
POLR2C
ENSSSCG00000025454
ENSG00000102978
RNA polymerase II subunit C
Low tissue specificity
Detected in all
POLR2F
ENSSSCG00000000116
ENSG00000100142
RNA polymerase II subunit F
Low tissue specificity
Detected in all
POLR2I
ENSSSCG00000039196
ENSG00000105258
DNA-directed RNA polymerase II subunit RPB9
Low tissue specificity
Detected in all
POLR2J
ENSSSCG00000007688
ENSG00000005075
RNA polymerase II subunit J
Low tissue specificity
Detected in all
POP7
ENSSSCG00000007672
ENSG00000172336
POP7 homolog, ribonuclease P/MRP subunit
Low tissue specificity
Detected in all
PPARGC1A
ENSSSCG00000029275
ENSG00000109819
Peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Tissue enhanced
Detected in many
kidney:
43.3
male glands:
65.2
salivary gland:
35.2
PPIF
ENSSSCG00000010330
ENSG00000108179
Peptidylprolyl isomerase F
Tissue enhanced
Detected in all
choroid plexus:
60.1
PPP1R1A
ENSSSCG00000000298
ENSG00000135447
Protein phosphatase 1 regulatory inhibitor subunit 1A
Tissue enriched
Detected in many
skeletal muscle:
231.9
PPTC7
ENSSSCG00000009825
ENSG00000196850
PTC7 protein phosphatase homolog
Tissue enhanced
Detected in all
skeletal muscle:
45.9
PQBP1
ENSSSCG00000025264
ENSG00000102103
Polyglutamine-binding protein 1
Low tissue specificity
Detected in all
PRADC1
ENSSSCG00000008304
ENSG00000135617
Protease associated domain containing 1
Low tissue specificity
Detected in all
PRDX2
ENSSSCG00000013736
Peroxiredoxin-2
Low tissue specificity
Detected in all
PRDX3
ENSSSCG00000010682
ENSG00000165672
Thioredoxin-dependent peroxide reductase, mitochondrial
Tissue enhanced
Detected in all
ovary:
91.6
PRDX6
ENSSSCG00000022742
ENSG00000117592
Peroxiredoxin-6
Tissue enhanced
Detected in all
large intestine:
134.3
PRKACA
ENSSSCG00000013771
ENSG00000072062
Protein kinase cAMP-activated catalytic subunit alpha
Low tissue specificity
Detected in all
PRMT1
ENSSSCG00000003189
ENSG00000126457
Protein arginine methyltransferase 1
Low tissue specificity
Detected in all
PROX1
ENSSSCG00000015584
ENSG00000117707
Prospero homeobox protein 1
Group enriched
Detected in many
lens:
191.6
liver:
61.8
PRUNE1
ENSSSCG00000006641
ENSG00000143363
Prune exopolyphosphatase 1
Low tissue specificity
Detected in all
PSEN2
ENSSSCG00000010860
ENSG00000143801
Presenilin-2 Presenilin-2 NTF subunit Presenilin-2 CTF subunit
Tissue enhanced
Detected in all
liver:
64.7
PSMA7
ENSSSCG00000033332
ENSG00000101182
Proteasome subunit alpha type-7
Low tissue specificity
Detected in all
PSMB6
ENSSSCG00000017913
ENSG00000142507
Proteasome subunit beta type-6
Tissue enhanced
Detected in all
lens:
55.9
PSMB7
ENSSSCG00000005590
ENSG00000136930
Proteasome subunit beta type-7
Tissue enhanced
Detected in all
lens:
114.5
PSMC3
ENSSSCG00000013239
ENSG00000165916
Proteasome 26S subunit, ATPase 3
Tissue enhanced
Detected in all
lens:
81.2
PSMC5
ENSSSCG00000017287
ENSG00000087191
26S proteasome regulatory subunit 8
Tissue enhanced
Detected in all
lens:
94.3
PSMD13
ENSSSCG00000014559
ENSG00000185627
Proteasome 26S subunit, non-ATPase 13
Low tissue specificity
Detected in all
PSMD2
ENSSSCG00000023998
ENSG00000175166
26S proteasome non-ATPase regulatory subunit 2
Low tissue specificity
Detected in all
PSMD3
ENSSSCG00000017489
ENSG00000108344
Proteasome 26S subunit, non-ATPase 3
Tissue enhanced
Detected in all
lens:
114.2
PSMD8
ENSSSCG00000036658
ENSG00000099341
Proteasome 26S subunit, non-ATPase 8
Low tissue specificity
Detected in all
PSMF1
ENSSSCG00000038854
ENSG00000125818
Proteasome inhibitor PI31 subunit
Group enriched
Detected in all
lens:
136.9
testis:
111.7
PSPH
ENSSSCG00000007748
ENSG00000146733
Phosphoserine phosphatase
Low tissue specificity
Detected in all
PTDSS1
ENSSSCG00000006089
ENSG00000156471
Phosphatidylserine synthase 1
Tissue enriched
Detected in all
heart:
138.5
PUF60
ENSSSCG00000038800
ENSG00000179950
Poly(U) binding splicing factor 60
Low tissue specificity
Detected in all
PYGO1
ENSSSCG00000004607
ENSG00000171016
Pygopus family PHD finger 1
Tissue enhanced
Detected in all
skeletal muscle:
55.6
QRSL1
ENSSSCG00000004374
ENSG00000130348
Glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1
Low tissue specificity
Detected in all
RAB11B
ENSSSCG00000013600
ENSG00000185236
Ras-related protein Rab-11B
Low tissue specificity
Detected in all
RAB5C
ENSSSCG00000032467
ENSG00000108774
Ras-related protein Rab-5C
Low tissue specificity
Detected in all
RAB7A
ENSSSCG00000011615
ENSG00000075785
RAB7A, member RAS oncogene family
Low tissue specificity
Detected in all
RABAC1
ENSSSCG00000003046
ENSG00000105404
Prenylated Rab acceptor protein 1
Tissue enhanced
Detected in all
male glands:
138.7
RABIF
ENSSSCG00000022787
ENSG00000183155
RAB interacting factor
Low tissue specificity
Detected in all
RAC1
ENSSSCG00000035090
ENSG00000136238
Ras-related C3 botulinum toxin substrate 1
Low tissue specificity
Detected in all
RAD23A
ENSSSCG00000013747
ENSG00000179262
RAD23 homolog A, nucleotide excision repair protein
Tissue enhanced
Detected in all
lens:
68.9
RANGRF
ENSSSCG00000038726
ENSG00000108961
Ran guanine nucleotide release factor isoform 2
Tissue enhanced
Detected in all
pineal gland:
20.3
testis:
20.5
RASSF8
ENSSSCG00000000559
ENSG00000123094
Ras association domain family member 8
Low tissue specificity
Detected in all
RBM17
ENSSSCG00000011134
ENSG00000134453
RNA binding motif protein 17
Low tissue specificity
Detected in all
RBM42
ENSSSCG00000002905
ENSG00000126254
RNA binding motif protein 42
Low tissue specificity
Detected in all
RCBTB1
ENSSSCG00000021060
ENSG00000136144
RCC1 and BTB domain containing protein 1
Tissue enhanced
Detected in all
male glands:
55.0
RDH14
ENSSSCG00000008608
ENSG00000240857
Retinol dehydrogenase 14
Tissue enhanced
Detected in all
lens:
31.7
RDX
ENSSSCG00000015013
ENSG00000137710
Radixin
Low tissue specificity
Detected in all
« prev
| Page
of 17 |
next »
MENU
