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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
Class
Cancers
Cardiovascular diseases
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Endocrine and metabolic diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
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Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
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18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
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THE PROJECT
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RELEASE HISTORY
836 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000038938
ENSG00000214253
Low tissue specificity
Detected in all
na
ENSSSCG00000039183
ENSG00000224877
Low tissue specificity
Detected in all
na
ENSSSCG00000039612
Low tissue specificity
Detected in all
na
ENSSSCG00000040273
Tissue enhanced
Detected in all
lens:
175.7
male glands:
198.1
na
ENSSSCG00000040325
Cytochrome c oxidase subunit 7C, mitochondrial
Low tissue specificity
Detected in all
na
ENSSSCG00000040396
ENSG00000176101
Tissue enhanced
Detected in all
testis:
91.9
na
ENSSSCG00000040820
ENSG00000250423
Tissue enhanced
Detected in some
cartilage:
21.0
ductus deferens:
13.8
lens:
23.2
testis:
20.9
na
ENSSSCG00000040854
Low tissue specificity
Detected in all
NAA10
ENSSSCG00000012791
ENSG00000102030
N(alpha)-acetyltransferase 10, NatA catalytic subunit
Low tissue specificity
Detected in all
NAA20
ENSSSCG00000028132
ENSG00000173418
N(alpha)-acetyltransferase 20, NatB catalytic subunit
Tissue enhanced
Detected in all
lens:
111.9
NAA38
ENSSSCG00000017971
ENSG00000183011
N(alpha)-acetyltransferase 38, NatC auxiliary subunit
Low tissue specificity
Detected in all
NABP2
ENSSSCG00000000384
ENSG00000139579
Nucleic acid binding protein 2
Low tissue specificity
Detected in all
NADK2
ENSSSCG00000016836
ENSG00000152620
NAD kinase 2, mitochondrial
Tissue enhanced
Detected in all
liver:
61.6
NAXE
ENSSSCG00000006480
ENSG00000163382
NAD(P)H-hydrate epimerase precursor
Low tissue specificity
Detected in all
NBAS
ENSSSCG00000008621
ENSG00000151779
Neuroblastoma amplified sequence
Low tissue specificity
Detected in all
NBR1
ENSSSCG00000030211
ENSG00000188554
NBR1, autophagy cargo receptor
Low tissue specificity
Detected in all
NCOA4
ENSSSCG00000010399
ENSG00000266412
Nuclear receptor coactivator 4
Tissue enriched
Detected in all
male glands:
156.0
NDUFA10
ENSSSCG00000016349
ENSG00000130414
NADH:ubiquinone oxidoreductase subunit A10
Low tissue specificity
Detected in all
NDUFA11
ENSSSCG00000027307
NADH dehydrogenase
Low tissue specificity
Detected in all
NDUFA13
ENSSSCG00000013936
ENSG00000186010
NADH dehydrogenase
Tissue enhanced
Detected in all
testis:
78.2
NDUFA6
ENSSSCG00000000045
ENSG00000184983
NADH dehydrogenase
Low tissue specificity
Detected in all
NDUFA8
ENSSSCG00000005528
ENSG00000119421
NADH dehydrogenase
Tissue enhanced
Detected in all
pineal gland:
49.0
NDUFAF3
ENSSSCG00000011371
ENSG00000178057
NADH dehydrogenase
Low tissue specificity
Detected in all
NDUFB10
ENSSSCG00000030328
ENSG00000140990
NADH:ubiquinone oxidoreductase subunit B10
Low tissue specificity
Detected in all
NDUFB2
ENSSSCG00000032390
ENSG00000090266
NADH dehydrogenase
Low tissue specificity
Detected in all
NDUFB7
ENSSSCG00000013778
ENSG00000099795
NADH:ubiquinone oxidoreductase subunit B7
Low tissue specificity
Detected in all
NDUFB8
ENSSSCG00000006166
NADH dehydrogenase
Tissue enhanced
Detected in all
lens:
60.6
NDUFB9
ENSSSCG00000005976
ENSG00000147684
NADH:ubiquinone oxidoreductase subunit B9
Tissue enhanced
Detected in all
skeletal muscle:
173.3
NDUFC2
ENSSSCG00000039494
ENSG00000151366,ENSG00000259112
NADH dehydrogenase
Low tissue specificity
Detected in all
NDUFS1
ENSSSCG00000016127
ENSG00000023228
NADH:ubiquinone oxidoreductase core subunit S1
Tissue enhanced
Detected in all
skeletal muscle:
68.8
NDUFS2
ENSSSCG00000006358
ENSG00000158864
NADH:ubiquinone oxidoreductase core subunit S2
Tissue enhanced
Detected in all
skeletal muscle:
66.4
NDUFS3
ENSSSCG00000032081
ENSG00000213619
NADH dehydrogenase
Low tissue specificity
Detected in all
NDUFS4
ENSSSCG00000016893
ENSG00000164258
NADH:ubiquinone oxidoreductase subunit S4
Low tissue specificity
Detected in all
NDUFS5
ENSSSCG00000003653
ENSG00000168653
NADH dehydrogenase
Low tissue specificity
Detected in all
NDUFS6
ENSSSCG00000017114
ENSG00000145494
NADH:ubiquinone oxidoreductase subunit S6
Tissue enhanced
Detected in all
heart:
63.1
NDUFS7
ENSSSCG00000024144
ENSG00000115286
NADH:ubiquinone oxidoreductase core subunit S7
Tissue enhanced
Detected in all
heart:
76.0
skeletal muscle:
98.1
NDUFS8
ENSSSCG00000037455
ENSG00000110717
NADH:ubiquinone oxidoreductase core subunit S8
Tissue enhanced
Detected in all
heart:
90.4
skeletal muscle:
126.3
NDUFV1
ENSSSCG00000012896
ENSG00000167792
NADH:ubiquinone oxidoreductase core subunit V1
Tissue enhanced
Detected in all
heart:
40.4
skeletal muscle:
39.1
NDUFV2
ENSSSCG00000038826
ENSG00000178127
Tissue enhanced
Detected in all
lens:
129.7
NECTIN3
ENSSSCG00000011933
ENSG00000177707
Nectin cell adhesion molecule 3
Group enriched
Detected in all
lens:
124.3
liver:
50.2
male glands:
31.6
testis:
60.3
NIT1
ENSSSCG00000037793
ENSG00000158793
Nitrilase 1
Tissue enhanced
Detected in all
kidney:
51.0
NIT2
ENSSSCG00000011968
ENSG00000114021
Omega-amidase NIT2
Tissue enhanced
Detected in all
male glands:
81.4
NME2
ENSSSCG00000017591
ENSG00000011052,ENSG00000243678
Nucleoside diphosphate kinase B
Tissue enhanced
Detected in all
male glands:
143.6
NMNAT1
ENSSSCG00000003400
ENSG00000173614
Nicotinamide nucleotide adenylyltransferase 1
Tissue enhanced
Detected in all
liver:
34.5
NNT
ENSSSCG00000016877
ENSG00000112992
Nicotinamide nucleotide transhydrogenase
Tissue enhanced
Detected in all
skeletal muscle:
81.1
NQO1
ENSSSCG00000002754
ENSG00000181019
NAD(P)H dehydrogenase
Tissue enhanced
Detected in many
cornea:
151.7
lens:
43.5
NRG4
ENSSSCG00000001860
ENSG00000169752
Neuregulin 4
Tissue enhanced
Detected in many
brain:
66.0
male glands:
67.5
NSFL1C
ENSSSCG00000007187
ENSG00000088833
NSFL1 cofactor p47
Tissue enriched
Detected in all
lens:
121.8
NSMCE1
ENSSSCG00000036275
ENSG00000169189
NSE1 homolog, SMC5-SMC6 complex component
Low tissue specificity
Detected in all
NTMT1
ENSSSCG00000005678
ENSG00000148335
N-terminal Xaa-Pro-Lys N-methyltransferase 1
Tissue enhanced
Detected in all
testis:
55.2
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