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Gene name
Human disease related genes
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Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
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Gene name
Class
Cancers
Cardiovascular diseases
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Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
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Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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499 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000014872
Tissue enhanced
Detected in many
heart:
5.2
na
ENSSSCG00000014929
ENSG00000255009
Tissue enhanced
Detected in some
kidney:
9.5
salivary gland:
5.1
small intestine:
5.5
na
ENSSSCG00000015027
ENSG00000170276
Tissue enhanced
Detected in all
heart:
64.6
na
ENSSSCG00000016370
Septin-2
Low tissue specificity
Detected in all
na
ENSSSCG00000017063
ENSG00000170624
Delta-sarcoglycan
Low tissue specificity
Detected in many
na
ENSSSCG00000017446
Low tissue specificity
Detected in many
na
ENSSSCG00000021683
Tissue enhanced
Detected in many
brain:
48.4
na
ENSSSCG00000022243
Tissue enhanced
Detected in many
cervix:
8.5
na
ENSSSCG00000024131
ENSG00000128923
Low tissue specificity
Detected in all
na
ENSSSCG00000024481
ENSG00000178104
Tissue enhanced
Detected in many
heart:
104.4
skeletal muscle:
122.5
na
ENSSSCG00000024791
CD59 glycoprotein
Tissue enhanced
Detected in all
cartilage:
84.5
na
ENSSSCG00000026701
ENSG00000173868
Tissue enhanced
Detected in some
cartilage:
26.4
heart:
10.7
skeletal muscle:
17.9
testis:
19.9
na
ENSSSCG00000026941
Tissue enhanced
Detected in many
smooth muscle:
11.1
na
ENSSSCG00000028794
ENSG00000255730
2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
Low tissue specificity
Detected in all
na
ENSSSCG00000029066
ENSG00000067064
Tissue enhanced
Detected in all
liver:
105.1
ovary:
47.5
na
ENSSSCG00000029791
Low tissue specificity
Detected in many
na
ENSSSCG00000031287
Tissue enhanced
Detected in many
cartilage:
42.7
ovary:
21.3
na
ENSSSCG00000031620
ENSG00000112290
Tissue enhanced
Detected in many
brain:
5.2
na
ENSSSCG00000032522
Tissue enhanced
Detected in many
skeletal muscle:
83.5
smooth muscle:
41.1
na
ENSSSCG00000032723
ENSG00000078124
Low tissue specificity
Detected in all
na
ENSSSCG00000033106
Tissue enhanced
Detected in many
cervix:
33.0
testis:
55.9
na
ENSSSCG00000033140
Tissue enhanced
Detected in some
breast:
4.6
cartilage:
5.1
skin:
4.8
na
ENSSSCG00000033350
ENSG00000114200
Tissue enriched
Detected in many
salivary gland:
111.4
na
ENSSSCG00000033749
Tissue enhanced
Detected in many
cervix:
13.6
penis:
13.9
skeletal muscle:
14.1
na
ENSSSCG00000033823
ENSG00000196236
Low tissue specificity
Detected in all
na
ENSSSCG00000033891
Low tissue specificity
Detected in all
na
ENSSSCG00000034993
ENSG00000134986
Tissue enhanced
Detected in all
brain:
145.3
na
ENSSSCG00000035687
Tissue enhanced
Detected in many
ductus deferens:
13.0
dura mater:
23.8
na
ENSSSCG00000036208
ENSG00000176974
Tissue enriched
Detected in many
liver:
139.1
na
ENSSSCG00000036961
Low tissue specificity
Detected in all
na
ENSSSCG00000036966
ENSG00000177868
Low tissue specificity
Detected in all
na
ENSSSCG00000037048
Tissue enhanced
Detected in many
dura mater:
20.2
skeletal muscle:
18.6
na
ENSSSCG00000037178
Tissue enhanced
Detected in many
cervix:
10.0
ovary:
9.1
na
ENSSSCG00000037893
Low tissue specificity
Detected in all
na
ENSSSCG00000038188
Tissue enhanced
Detected in some
brain:
11.9
lens:
4.2
stomach:
4.3
testis:
6.4
na
ENSSSCG00000038297
Tissue enhanced
Detected in many
dura mater:
23.3
vagus nerve:
26.7
na
ENSSSCG00000038406
Low tissue specificity
Detected in all
na
ENSSSCG00000038588
Tissue enhanced
Detected in some
brain:
5.6
kidney:
8.5
na
ENSSSCG00000038646
Low tissue specificity
Detected in all
na
ENSSSCG00000039009
Tissue enhanced
Detected in many
smooth muscle:
107.2
na
ENSSSCG00000039523
Low tissue specificity
Detected in all
na
ENSSSCG00000039658
ENSG00000065809
Tissue enhanced
Detected in all
brain:
81.8
lens:
80.9
na
ENSSSCG00000039915
ENSG00000104679
Low tissue specificity
Detected in all
na
ENSSSCG00000040287
Low tissue specificity
Detected in many
na
ENSSSCG00000040337
Adenylate kinase 4, mitochondrial
Tissue enhanced
Detected in all
adipose tissue:
37.8
kidney:
37.8
na
ENSSSCG00000040554
ENSG00000092758
Tissue enriched
Detected in some
cartilage:
366.1
na
ENSSSCG00000040802
Low tissue specificity
Detected in many
NACC2
ENSSSCG00000040967
ENSG00000148411
NACC family member 2
Tissue enhanced
Detected in all
lens:
47.1
NDRG1
ENSSSCG00000005944
ENSG00000104419
N-myc downstream regulated 1
Tissue enhanced
Detected in all
lens:
209.7
NEO1
ENSSSCG00000001921
ENSG00000067141
Neogenin 1
Low tissue specificity
Detected in all
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