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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
Cardiovascular diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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499 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
DLC1
ENSSSCG00000006970
ENSG00000164741
DLC1 Rho GTPase activating protein
Low tissue specificity
Detected in many
DMD
ENSSSCG00000028148
ENSG00000198947
Dystrophin
Tissue enhanced
Detected in many
skeletal muscle:
82.6
vagus nerve:
69.3
DNAJB4
ENSSSCG00000003766
ENSG00000162616
DnaJ heat shock protein family (Hsp40) member B4
Low tissue specificity
Detected in all
DNLZ
ENSSSCG00000034732
ENSG00000213221
DNL-type zinc finger
Low tissue specificity
Detected in all
DOK7
ENSSSCG00000008702
ENSG00000175920
Docking protein 7
Tissue enhanced
Detected in many
brain:
16.1
heart:
24.7
skeletal muscle:
13.7
DPM3
ENSSSCG00000006528
ENSG00000179085
Dolichyl-phosphate mannosyltransferase subunit 3
Tissue enhanced
Detected in many
pineal gland:
14.0
DPYSL3
ENSSSCG00000036549
ENSG00000113657
Dihydropyrimidinase like 3
Low tissue specificity
Detected in many
DSEL
ENSSSCG00000035941
ENSG00000171451
Dermatan sulfate epimerase-like
Tissue enhanced
Detected in many
pituitary gland:
37.4
thyroid gland:
28.7
DST
ENSSSCG00000001499
ENSG00000151914
Dystonin
Low tissue specificity
Detected in all
DTYMK
ENSSSCG00000034147
ENSG00000168393
Deoxythymidylate kinase
Low tissue specificity
Detected in all
EGFL6
ENSSSCG00000012121
ENSG00000198759
EGF like domain multiple 6
Tissue enhanced
Detected in many
cornea:
16.4
dura mater:
21.7
pituitary gland:
25.4
upper respiratory system:
14.7
EGLN1
ENSSSCG00000010172
ENSG00000135766
Egl-9 family hypoxia inducible factor 1
Low tissue specificity
Detected in all
ELOVL1
ENSSSCG00000035238
ENSG00000066322
Elongation of very long chain fatty acids protein 1
Tissue enhanced
Detected in all
brain:
60.5
EML1
ENSSSCG00000027667
ENSG00000066629
Echinoderm microtubule associated protein like 1
Low tissue specificity
Detected in all
ENPP4
ENSSSCG00000025788
ENSG00000001561
Ectonucleotide pyrophosphatase/phosphodiesterase 4
Tissue enhanced
Detected in all
brain:
49.6
lens:
58.8
EPB41L2
ENSSSCG00000004199
ENSG00000079819
Erythrocyte membrane protein band 4.1 like 2
Low tissue specificity
Detected in all
ERMP1
ENSSSCG00000005207
ENSG00000099219
Endoplasmic reticulum metallopeptidase 1
Low tissue specificity
Detected in all
ESRRG
ENSSSCG00000010814
ENSG00000196482
Estrogen related receptor gamma
Tissue enhanced
Detected in many
kidney:
33.1
male glands:
23.1
salivary gland:
74.0
FAM124A
ENSSSCG00000029598
ENSG00000150510
Family with sequence similarity 124 member A
Tissue enhanced
Detected in all
lens:
40.0
FAM13C
ENSSSCG00000010209
ENSG00000148541
Family with sequence similarity 13 member C
Low tissue specificity
Detected in many
FAM149A
ENSSSCG00000015802
ENSG00000109794
Family with sequence similarity 149 member A
Tissue enriched
Detected in many
lens:
125.8
FAM171A1
ENSSSCG00000011047
ENSG00000148468
Family with sequence similarity 171 member A1
Low tissue specificity
Detected in all
FAM184B
ENSSSCG00000026232
ENSG00000047662
Family with sequence similarity 184 member B
Tissue enhanced
Detected in many
epididymis:
37.2
esophagus:
17.9
FAM20C
ENSSSCG00000020813
ENSG00000177706
FAM20C, golgi associated secretory pathway kinase
Tissue enhanced
Detected in all
cartilage:
47.3
FAM53C
ENSSSCG00000021092
ENSG00000120709
Family with sequence similarity 53 member C
Low tissue specificity
Detected in all
FAM69B
ENSSSCG00000005837
ENSG00000165716
Family with sequence similarity 69 member B
Low tissue specificity
Detected in all
FBXO17
ENSSSCG00000038805
ENSG00000269190
F-box protein 17
Low tissue specificity
Detected in all
FBXO30
ENSSSCG00000004121
ENSG00000118496
F-box protein 30
Low tissue specificity
Detected in all
FBXW8
ENSSSCG00000009860
ENSG00000174989
F-box and WD repeat domain containing 8
Low tissue specificity
Detected in all
FDFT1
ENSSSCG00000026044
ENSG00000079459
Squalene synthase
Low tissue specificity
Detected in all
FERMT2
ENSSSCG00000005041
ENSG00000073712
Fermitin family member 2
Tissue enhanced
Detected in all
smooth muscle:
90.3
FIBIN
ENSSSCG00000022592
ENSG00000176971
Fin bud initiation factor homolog (zebrafish)
Tissue enhanced
Detected in many
cartilage:
83.3
dura mater:
39.3
FIGN
ENSSSCG00000034262
ENSG00000182263
Fidgetin, microtubule severing factor
Tissue enhanced
Detected in many
lens:
24.3
FKBP9
ENSSSCG00000021250
ENSG00000122642
Peptidyl-prolyl cis-trans isomerase FKBP9 precursor
Low tissue specificity
Detected in all
FLOT1
ENSSSCG00000022725
ENSG00000137312
Flotillin-1
Low tissue specificity
Detected in all
FLRT2
ENSSSCG00000040166
ENSG00000185070
Fibronectin leucine rich transmembrane protein 2
Tissue enhanced
Detected in all
lens:
42.3
FN3K
ENSSSCG00000017131
ENSG00000167363
Fructosamine 3 kinase
Tissue enhanced
Detected in many
lens:
51.3
FRZB
ENSSSCG00000016018
ENSG00000162998
Secreted frizzled-related protein 3 precursor
Tissue enhanced
Detected in many
heart:
72.7
pineal gland:
62.3
FUT10
ENSSSCG00000038178
ENSG00000172728
Fucosyltransferase 10
Low tissue specificity
Detected in all
FXR2
ENSSSCG00000017953
ENSG00000129245
FMR1 autosomal homolog 2
Low tissue specificity
Detected in all
FXYD1
ENSSSCG00000021374
ENSG00000266964
FXYD domain containing ion transport regulator 1
Tissue enhanced
Detected in all
choroid plexus:
197.1
skeletal muscle:
150.3
FZD2
ENSSSCG00000029838
ENSG00000180340
Frizzled-2 precursor
Tissue enhanced
Detected in many
vagus nerve:
45.7
FZD9
ENSSSCG00000023004
ENSG00000188763
Frizzled class receptor 9
Group enriched
Detected in many
cartilage:
34.9
choroid plexus:
18.2
testis:
9.9
GAB1
ENSSSCG00000009048
ENSG00000109458
GRB2 associated binding protein 1
Tissue enhanced
Detected in all
brain:
93.3
GALNT10
ENSSSCG00000017072
ENSG00000164574
Polypeptide N-acetylgalactosaminyltransferase 10
Low tissue specificity
Detected in all
GATM
ENSSSCG00000004672
ENSG00000171766
Glycine amidinotransferase, mitochondrial
Tissue enhanced
Detected in all
kidney:
41.3
liver:
75.6
male glands:
39.5
GCAT
ENSSSCG00000029945
ENSG00000100116
Glycine C-acetyltransferase
Tissue enriched
Detected in many
liver:
49.9
GCLC
ENSSSCG00000001488
ENSG00000001084
Glutamate-cysteine ligase catalytic subunit
Tissue enhanced
Detected in all
lens:
59.0
GDF10
ENSSSCG00000010376
ENSG00000266524
Growth differentiation factor 10
Tissue enhanced
Detected in many
cartilage:
40.2
dura mater:
14.4
synovial tissue:
32.4
GFOD2
ENSSSCG00000024750
ENSG00000141098
Glucose-fructose oxidoreductase domain containing 2
Low tissue specificity
Detected in all
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