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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
Cardiovascular diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
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Biological process
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Disease
Keyword
Chromosome
1
2
3
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5
6
7
8
9
10
11
12
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
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Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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2003 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
EED
ENSSSCG00000014915
ENSG00000074266
Embryonic ectoderm development
Low tissue specificity
Detected in all
EFR3A
ENSSSCG00000005955
ENSG00000132294
EFR3 homolog A
Low tissue specificity
Detected in all
EI24
ENSSSCG00000015213
ENSG00000149547
EI24, autophagy associated transmembrane protein
Low tissue specificity
Detected in all
EIF1AX
ENSSSCG00000032223
ENSG00000173674
Eukaryotic translation initiation factor 1A, X-chromosomal
Low tissue specificity
Detected in all
EIF1B
ENSSSCG00000011270
ENSG00000114784
Eukaryotic translation initiation factor 1b
Tissue enhanced
Detected in all
brain:
64.6
lens:
86.7
EIF2AK2
ENSSSCG00000008496
ENSG00000055332
Interferon-induced, double-stranded RNA-activated protein kinase
Low tissue specificity
Detected in all
EIF2B2
ENSSSCG00000002377
ENSG00000119718
Eukaryotic translation initiation factor 2B subunit beta
Low tissue specificity
Detected in all
EIF2B3
ENSSSCG00000029808
ENSG00000070785
Eukaryotic translation initiation factor 2B subunit gamma
Low tissue specificity
Detected in all
EIF2S1
ENSSSCG00000033295
ENSG00000134001
Eukaryotic translation initiation factor 2 subunit alpha
Tissue enhanced
Detected in all
lens:
42.8
EIF3J
ENSSSCG00000004691
ENSG00000104131
Eukaryotic translation initiation factor 3 subunit J
Low tissue specificity
Detected in all
EIF4A3
ENSSSCG00000017155
ENSG00000141543
Eukaryotic initiation factor 4A-III Eukaryotic initiation factor 4A-III, N-terminally processed
Low tissue specificity
Detected in all
EIF4G3
ENSSSCG00000003512
ENSG00000075151
Eukaryotic translation initiation factor 4 gamma 3
Low tissue specificity
Detected in all
EIF4H
ENSSSCG00000025966
ENSG00000106682
Eukaryotic translation initiation factor 4H isoform 1
Low tissue specificity
Detected in all
EIF5A2
ENSSSCG00000040946
ENSG00000163577
Eukaryotic translation initiation factor 5A2
Tissue enhanced
Detected in many
brain:
21.4
ELAVL1
ENSSSCG00000013592
ENSG00000066044
ELAV-like protein 1
Low tissue specificity
Detected in all
ELF2
ENSSSCG00000029920
ENSG00000109381
E74 like ETS transcription factor 2
Low tissue specificity
Detected in all
ELMOD2
ENSSSCG00000009055
ENSG00000179387
ELMO domain containing 2
Tissue enhanced
Detected in all
choroid plexus:
23.6
pineal gland:
20.3
ELOC
ENSSSCG00000006176
ENSG00000154582
Elongin C
Low tissue specificity
Detected in all
ELOVL7
ENSSSCG00000035012
ENSG00000164181
ELOVL fatty acid elongase 7
Tissue enhanced
Detected in all
brain:
45.3
male glands:
53.5
ELP2
ENSSSCG00000020898
ENSG00000134759
Elongator acetyltransferase complex subunit 2
Low tissue specificity
Detected in all
ELP3
ENSSSCG00000009674
ENSG00000134014
Elongator acetyltransferase complex subunit 3
Low tissue specificity
Detected in all
ELP4
ENSSSCG00000013321
ENSG00000109911
Elongator acetyltransferase complex subunit 4
Low tissue specificity
Detected in all
EMC2
ENSSSCG00000006032
ENSG00000104412
ER membrane protein complex subunit 2
Low tissue specificity
Detected in all
EMC3
ENSSSCG00000011562
ENSG00000125037
ER membrane protein complex subunit 3
Low tissue specificity
Detected in all
EMC4
ENSSSCG00000039550
ENSG00000128463
ER membrane protein complex subunit 4
Low tissue specificity
Detected in all
EMC7
ENSSSCG00000027051
ENSG00000134153
ER membrane protein complex subunit 7 precursor
Low tissue specificity
Detected in all
ENO1
ENSSSCG00000022343
ENSG00000074800
Enolase 1
Tissue enriched
Detected in all
lens:
358.5
ENOPH1
ENSSSCG00000009246
ENSG00000145293
Enolase-phosphatase E1
Tissue enhanced
Detected in all
brain:
40.4
ENTPD3
ENSSSCG00000025783
ENSG00000168032
Ectonucleoside triphosphate diphosphohydrolase 3
Low tissue specificity
Detected in all
ENY2
ENSSSCG00000038444
ENSG00000120533
Transcription and mRNA export factor ENY2 isoform 1
Low tissue specificity
Detected in all
EPC2
ENSSSCG00000027211
ENSG00000135999
Enhancer of polycomb homolog 2
Low tissue specificity
Detected in all
EPDR1
ENSSSCG00000020963
ENSG00000086289
Ependymin related 1
Tissue enhanced
Detected in many
brain:
36.2
lens:
43.4
EPRS
ENSSSCG00000010821
ENSG00000136628
Glutamyl-prolyl-tRNA synthetase
Low tissue specificity
Detected in all
ERBIN
ENSSSCG00000016954
ENSG00000112851
Erbb2 interacting protein
Low tissue specificity
Detected in all
ERCC8
ENSSSCG00000016934
ENSG00000049167
ERCC excision repair 8, CSA ubiquitin ligase complex subunit
Low tissue specificity
Detected in all
ERGIC2
ENSSSCG00000000536
ENSG00000087502
Endoplasmic reticulum-Golgi intermediate compartment protein 2
Tissue enhanced
Detected in all
male glands:
81.7
ERH
ENSSSCG00000002307
ENSG00000100632
Enhancer of rudimentary homolog
Low tissue specificity
Detected in all
ERLEC1
ENSSSCG00000008414
ENSG00000068912
Endoplasmic reticulum lectin 1
Low tissue specificity
Detected in all
ERLIN2
ENSSSCG00000039480
ENSG00000147475
Erlin-2 precursor
Low tissue specificity
Detected in all
ERO1A
ENSSSCG00000005037
ENSG00000197930
ERO1-like protein alpha
Low tissue specificity
Detected in all
ERO1B
ENSSSCG00000010148
ENSG00000086619
Endoplasmic reticulum oxidoreductase 1 beta
Tissue enhanced
Detected in all
ovary:
68.7
testis:
50.8
ERP29
ENSSSCG00000009888
ENSG00000089248
Endoplasmic reticulum protein 29
Low tissue specificity
Detected in all
ESD
ENSSSCG00000009407
ENSG00000139684
S-formylglutathione hydrolase
Tissue enhanced
Detected in all
lens:
91.2
ETAA1
ENSSSCG00000023908
ENSG00000143971
ETAA1, ATR kinase activator
Low tissue specificity
Detected in all
ETF1
ENSSSCG00000014337
ENSG00000120705
Eukaryotic translation termination factor 1
Low tissue specificity
Detected in all
ETFRF1
ENSSSCG00000033843
ENSG00000205707
Electron transfer flavoprotein regulatory factor 1
Low tissue specificity
Detected in all
ETNK1
ENSSSCG00000039397
ENSG00000139163
Ethanolamine kinase 1
Low tissue specificity
Detected in all
EXO5
ENSSSCG00000003980
ENSG00000164002
Exonuclease 5
Low tissue specificity
Detected in all
EXOC5
ENSSSCG00000005066
ENSG00000070367
Exocyst complex component 5
Low tissue specificity
Detected in all
EXOC8
ENSSSCG00000010174
ENSG00000116903
Exocyst complex component 8
Low tissue specificity
Detected in all
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