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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
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Gene name
Class
Cancers
Cardiovascular diseases
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Endocrine and metabolic diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
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18
MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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2003 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
EXOSC1
ENSSSCG00000010518
ENSG00000171311
Exosome component 1
Low tissue specificity
Detected in all
EXOSC3
ENSSSCG00000005355
ENSG00000107371
Exosome component 3
Tissue enriched
Detected in all
testis:
28.4
EXOSC5
ENSSSCG00000003015
ENSG00000077348
Exosome complex component RRP46
Low tissue specificity
Detected in all
EXOSC7
ENSSSCG00000011300
ENSG00000075914
Exosome complex component RRP42
Low tissue specificity
Detected in all
EXOSC8
ENSSSCG00000009358
ENSG00000120699
Exosome component 8
Tissue enhanced
Detected in all
lens:
51.5
EXOSC9
ENSSSCG00000009096
ENSG00000123737
Exosome component 9
Low tissue specificity
Detected in all
FAF1
ENSSSCG00000003877
ENSG00000185104
Fas associated factor 1
Low tissue specificity
Detected in all
FAIM
ENSSSCG00000023814
ENSG00000158234
Fas apoptotic inhibitory molecule 1
Tissue enhanced
Detected in all
retina:
52.1
FAM103A1
ENSSSCG00000038630
ENSG00000169612
Family with sequence similarity 103 member A1
Tissue enhanced
Detected in all
lens:
50.4
FAM114A2
ENSSSCG00000017073
ENSG00000055147
Family with sequence similarity 114 member A2
Low tissue specificity
Detected in all
FAM120C
ENSSSCG00000035822
ENSG00000184083
Family with sequence similarity 120C
Low tissue specificity
Detected in all
FAM126B
ENSSSCG00000036339
ENSG00000155744
Family with sequence similarity 126 member B
Tissue enhanced
Detected in all
brain:
41.8
FAM13B
ENSSSCG00000029125
ENSG00000031003
Family with sequence similarity 13 member B
Low tissue specificity
Detected in all
FAM161B
ENSSSCG00000002353
ENSG00000156050
Family with sequence similarity 161 member B
Tissue enhanced
Detected in all
lens:
45.4
FAM168B
ENSSSCG00000033126
ENSG00000152102
Family with sequence similarity 168 member B
Low tissue specificity
Detected in all
FAM172A
ENSSSCG00000027608
ENSG00000113391
Family with sequence similarity 172 member A
Low tissue specificity
Detected in all
FAM177A1
ENSSSCG00000034753
ENSG00000151327
Protein FAM177A1
Low tissue specificity
Detected in all
FAM192A
ENSSSCG00000034414
ENSG00000172775
Family with sequence similarity 192 member A
Low tissue specificity
Detected in all
FAM199X
ENSSSCG00000012542
ENSG00000123575
Family with sequence similarity 199, X-linked
Low tissue specificity
Detected in all
FAM208A
ENSSSCG00000024201
ENSG00000163946
Family with sequence similarity 208 member A
Low tissue specificity
Detected in all
FAM213A
ENSSSCG00000010340
ENSG00000122378
Redox-regulatory protein FAM213A isoform 2
Low tissue specificity
Detected in all
FAM32A
ENSSSCG00000013855
ENSG00000105058
Protein FAM32A
Low tissue specificity
Detected in all
FAM35A
ENSSSCG00000027767
ENSG00000122376
Family with sequence similarity 35 member A
Low tissue specificity
Detected in all
FAM3C
ENSSSCG00000016616
ENSG00000196937
Family with sequence similarity 3 member C
Tissue enhanced
Detected in all
male glands:
75.3
FAM45A
ENSSSCG00000010680
ENSG00000119979
Family with sequence similarity 45 member A
Low tissue specificity
Detected in all
FAM91A1
ENSSSCG00000024424
ENSG00000176853
Family with sequence similarity 91 member A1
Low tissue specificity
Detected in all
FAM96B
ENSSSCG00000033027
ENSG00000166595
Family with sequence similarity 96 member B
Tissue enhanced
Detected in all
lens:
37.5
FAM98B
ENSSSCG00000004792
ENSG00000171262
Family with sequence similarity 98 member B
Low tissue specificity
Detected in all
FAN1
ENSSSCG00000004845
ENSG00000198690
FANCD2 and FANCI associated nuclease 1
Low tissue specificity
Detected in all
FANCL
ENSSSCG00000008394
ENSG00000115392
Fanconi anemia complementation group L
Low tissue specificity
Detected in all
FAR2
ENSSSCG00000000541
ENSG00000064763
Fatty acyl-CoA reductase 2
Tissue enhanced
Detected in all
pineal gland:
29.7
FARSA
ENSSSCG00000013745
ENSG00000179115
Phenylalanyl-tRNA synthetase alpha subunit
Low tissue specificity
Detected in all
FASTKD2
ENSSSCG00000016134
ENSG00000118246
FAST kinase domains 2
Low tissue specificity
Detected in all
FBXL3
ENSSSCG00000009472
ENSG00000005812
F-box and leucine rich repeat protein 3
Low tissue specificity
Detected in all
FBXL5
ENSSSCG00000008740
ENSG00000118564
F-box and leucine rich repeat protein 5
Low tissue specificity
Detected in all
FBXO11
ENSSSCG00000029485
ENSG00000138081
F-box protein 11
Low tissue specificity
Detected in all
FBXO22
ENSSSCG00000027457
ENSG00000167196
F-box protein 22
Low tissue specificity
Detected in all
FBXO25
ENSSSCG00000023665
ENSG00000147364
F-box protein 25
Low tissue specificity
Detected in all
FBXO3
ENSSSCG00000013308
ENSG00000110429
F-box protein 3
Low tissue specificity
Detected in all
FBXO33
ENSSSCG00000004989
ENSG00000165355
F-box protein 33
Low tissue specificity
Detected in all
FBXO34
ENSSSCG00000005057
ENSG00000178974
F-box only protein 34
Low tissue specificity
Detected in many
FBXO42
ENSSSCG00000024794
ENSG00000037637
F-box protein 42
Low tissue specificity
Detected in all
FBXO48
ENSSSCG00000008347
ENSG00000204923
F-box protein 48
Low tissue specificity
Detected in all
FBXO8
ENSSSCG00000009702
ENSG00000164117
F-box protein 8
Tissue enhanced
Detected in all
male glands:
52.5
FBXW11
ENSSSCG00000023307
ENSG00000072803
F-box and WD repeat domain containing 11
Low tissue specificity
Detected in all
FEM1B
ENSSSCG00000022419
ENSG00000169018
Fem-1 homolog B
Low tissue specificity
Detected in all
FEM1C
ENSSSCG00000014217
ENSG00000145780
Fem-1 homolog C
Low tissue specificity
Detected in all
FEN1
ENSSSCG00000028696
ENSG00000168496
Flap structure-specific endonuclease 1
Low tissue specificity
Detected in all
FGFR1OP2
ENSSSCG00000000554
ENSG00000111790
FGFR1 oncogene partner 2
Low tissue specificity
Detected in all
FHIT
ENSSSCG00000035818
ENSG00000189283
Fragile histidine triad
Tissue enhanced
Detected in all
male glands:
36.6
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