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Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
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16
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18
MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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2003 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
DEGS1
ENSSSCG00000024484
ENSG00000143753
Sphingolipid delta(4)-desaturase DES1
Low tissue specificity
Detected in all
DENND1B
ENSSSCG00000010900
ENSG00000213047
DENN domain containing 1B
Low tissue specificity
Detected in all
DENND4A
ENSSSCG00000004938
ENSG00000174485
DENN domain containing 4A
Low tissue specificity
Detected in all
DENND6A
ENSSSCG00000011467
ENSG00000174839
DENN domain containing 6A
Low tissue specificity
Detected in all
DGUOK
ENSSSCG00000008293
ENSG00000114956
Deoxyguanosine kinase
Low tissue specificity
Detected in all
DHDDS
ENSSSCG00000033516
ENSG00000117682
Dehydrodolichyl diphosphate synthase complex subunit DHDDS
Tissue enhanced
Detected in all
large intestine:
44.1
DHDH
ENSSSCG00000003158
ENSG00000104808
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase
Tissue enriched
Detected in many
lens:
112.6
DHPS
ENSSSCG00000013723
ENSG00000095059
Deoxyhypusine synthase
Low tissue specificity
Detected in many
DHX36
ENSSSCG00000024916
ENSG00000174953
DEAH-box helicase 36
Low tissue specificity
Detected in all
DHX40
ENSSSCG00000017665
ENSG00000108406
DEAH-box helicase 40
Low tissue specificity
Detected in all
DHX9
ENSSSCG00000026806
ENSG00000135829
DExH-box helicase 9
Low tissue specificity
Detected in all
DIMT1
ENSSSCG00000031990
ENSG00000086189
Probable dimethyladenosine transferase
Low tissue specificity
Detected in all
DLG1
ENSSSCG00000011833
ENSG00000075711
Discs large MAGUK scaffold protein 1
Low tissue specificity
Detected in all
DMAC1
ENSSSCG00000005196
ENSG00000137038
Distal membrane arm assembly complex 1
Tissue enhanced
Detected in all
lens:
38.3
DMXL1
ENSSSCG00000027857
ENSG00000172869
Dmx like 1
Low tissue specificity
Detected in all
DNAJA1
ENSSSCG00000011000
ENSG00000086061
DnaJ homolog subfamily A member 1
Tissue enhanced
Detected in all
ovary:
113.7
DNAJA2
ENSSSCG00000002846
ENSG00000069345
DnaJ heat shock protein family (Hsp40) member A2
Low tissue specificity
Detected in all
DNAJB14
ENSSSCG00000009177
ENSG00000164031
DnaJ heat shock protein family (Hsp40) member B14
Low tissue specificity
Detected in all
DNAJB9
ENSSSCG00000016653
ENSG00000128590
DnaJ heat shock protein family (Hsp40) member B9
Tissue enhanced
Detected in all
male glands:
66.5
DNAJC10
ENSSSCG00000016017
ENSG00000077232
DnaJ heat shock protein family (Hsp40) member C10
Tissue enriched
Detected in all
male glands:
170.0
DNAJC24
ENSSSCG00000026083
ENSG00000170946
DnaJ heat shock protein family (Hsp40) member C24
Low tissue specificity
Detected in all
DNAJC28
ENSSSCG00000028192
ENSG00000177692
DnaJ heat shock protein family (Hsp40) member C28
Low tissue specificity
Detected in all
DNAJC3
ENSSSCG00000026082
ENSG00000102580
DnaJ homolog subfamily C member 3 precursor
Low tissue specificity
Detected in all
DNAJC30
ENSSSCG00000007712
ENSG00000176410
DnaJ heat shock protein family (Hsp40) member C30
Low tissue specificity
Detected in all
DNAJC8
ENSSSCG00000038907
ENSG00000126698
DnaJ heat shock protein family (Hsp40) member C8
Low tissue specificity
Detected in all
DNM1L
ENSSSCG00000000529
ENSG00000087470
Dynamin 1 like
Low tissue specificity
Detected in all
DNPH1
ENSSSCG00000026568
ENSG00000112667
2'-deoxynucleoside 5'-phosphate N-hydrolase 1
Low tissue specificity
Detected in all
DNTTIP2
ENSSSCG00000006892
ENSG00000067334
Deoxynucleotidyltransferase terminal-interacting protein 2
Low tissue specificity
Detected in all
DPH3
ENSSSCG00000011196
DPH3 homolog
Tissue enhanced
Detected in all
lens:
48.6
DPH5
ENSSSCG00000006859
ENSG00000117543
Diphthine methyl ester synthase
Low tissue specificity
Detected in all
DPM1
ENSSSCG00000034952
ENSG00000000419
Dolichol-phosphate mannosyltransferase subunit 1
Low tissue specificity
Detected in all
DPP3
ENSSSCG00000030415
ENSG00000254986
Dipeptidyl peptidase 3
Low tissue specificity
Detected in all
DPP8
ENSSSCG00000004934
ENSG00000074603
Dipeptidyl peptidase 8
Low tissue specificity
Detected in all
DPY19L4
ENSSSCG00000006098
ENSG00000156162
Dpy-19 like 4
Low tissue specificity
Detected in all
DPY30
ENSSSCG00000008516
ENSG00000162961
Protein dpy-30 homolog
Tissue enhanced
Detected in all
lens:
107.0
DR1
ENSSSCG00000028310
ENSG00000117505
Down-regulator of transcription 1
Low tissue specificity
Detected in all
DRAM2
ENSSSCG00000026922
ENSG00000156171
DNA damage-regulated autophagy modulator protein 2
Low tissue specificity
Detected in all
DUSP12
ENSSSCG00000006347
ENSG00000081721
Dual specificity phosphatase 12
Low tissue specificity
Detected in all
DUSP14
ENSSSCG00000029874
ENSG00000276023
Dual specificity phosphatase 14
Low tissue specificity
Detected in all
DYNC1I2
ENSSSCG00000015948
ENSG00000077380
Cytoplasmic dynein 1 intermediate chain 2
Low tissue specificity
Detected in all
DYNC1LI1
ENSSSCG00000011233
ENSG00000144635
Dynein cytoplasmic 1 light intermediate chain 1
Low tissue specificity
Detected in all
DYNC1LI2
ENSSSCG00000036210
ENSG00000135720
Cytoplasmic dynein 1 light intermediate chain 2
Tissue enhanced
Detected in all
brain:
65.2
DYNLL1
ENSSSCG00000009904
ENSG00000088986
Dynein light chain 1, cytoplasmic
Low tissue specificity
Detected in all
DYNLL2
ENSSSCG00000020962
ENSG00000264364
Dynein light chain LC8-type 2
Low tissue specificity
Detected in all
DYNLRB1
ENSSSCG00000037510
ENSG00000125971
Dynein light chain roadblock-type 1
Low tissue specificity
Detected in all
DYNLT3
ENSSSCG00000028908
ENSG00000165169
Dynein light chain Tctex-type 3
Low tissue specificity
Detected in all
DYRK1A
ENSSSCG00000030480
ENSG00000157540
Dual specificity tyrosine phosphorylation regulated kinase 1A
Low tissue specificity
Detected in all
EAPP
ENSSSCG00000001960
ENSG00000129518
E2F associated phosphoprotein
Low tissue specificity
Detected in all
ECD
ENSSSCG00000010295
ENSG00000122882
Ecdysoneless cell cycle regulator
Low tissue specificity
Detected in all
EDC3
ENSSSCG00000001903
ENSG00000179151
Enhancer of mRNA decapping 3
Low tissue specificity
Detected in all
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