We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
2003 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 41 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
TRAPPC2
ENSSSCG00000012124
ENSG00000196459,ENSG00000256060
Trafficking protein particle complex subunit 2
Tissue enhanced
Detected in all
lens:
35.7
TRAPPC3
ENSSSCG00000037213
ENSG00000054116
Trafficking protein particle complex 3
Low tissue specificity
Detected in all
TRAPPC4
ENSSSCG00000037439
ENSG00000196655
Trafficking protein particle complex 4
Low tissue specificity
Detected in all
TRAPPC6B
ENSSSCG00000004986
ENSG00000182400
Trafficking protein particle complex 6B
Low tissue specificity
Detected in all
TRAPPC8
ENSSSCG00000003728
ENSG00000153339
Trafficking protein particle complex 8
Low tissue specificity
Detected in all
TRIM23
ENSSSCG00000016948
ENSG00000113595
Tripartite motif containing 23
Low tissue specificity
Detected in all
TRIM32
ENSSSCG00000005501
ENSG00000119401
Tripartite motif containing 32
Tissue enhanced
Detected in all
brain:
30.2
TRIM37
ENSSSCG00000023727
ENSG00000108395
Tripartite motif containing 37
Low tissue specificity
Detected in all
TRIQK
ENSSSCG00000037733
ENSG00000205133
Triple QxxK/R motif containing
Tissue enhanced
Detected in all
male glands:
50.8
TRMT10A
ENSSSCG00000009180
ENSG00000145331
TRNA methyltransferase 10 homolog A
Low tissue specificity
Detected in all
TRMT10C
ENSSSCG00000011956
ENSG00000174173
TRNA methyltransferase 10C, mitochondrial RNase P subunit
Low tissue specificity
Detected in all
TRMT11
ENSSSCG00000004220
ENSG00000066651
TRNA methyltransferase 11 homolog
Low tissue specificity
Detected in all
TRMT5
ENSSSCG00000024529
ENSG00000126814
TRNA methyltransferase 5
Low tissue specificity
Detected in all
TRMT61B
ENSSSCG00000030147
ENSG00000171103
TRNA methyltransferase 61B
Low tissue specificity
Detected in all
TRNT1
ENSSSCG00000011529
ENSG00000072756
TRNA nucleotidyl transferase 1
Tissue enhanced
Detected in all
lens:
45.0
TSN
ENSSSCG00000015729
ENSG00000211460
Translin
Tissue enhanced
Detected in all
lens:
51.4
TSPAN13
ENSSSCG00000015362
ENSG00000106537
Tetraspanin 13
Tissue enhanced
Detected in many
male glands:
109.7
TSPAN3
ENSSSCG00000001868
ENSG00000140391
Tetraspanin-3
Low tissue specificity
Detected in all
TSPAN31
ENSSSCG00000036731
ENSG00000135452
Tetraspanin 31
Tissue enhanced
Detected in all
male glands:
63.9
TSR1
ENSSSCG00000038534
ENSG00000167721
TSR1, ribosome maturation factor
Low tissue specificity
Detected in all
TTC27
ENSSSCG00000008512
ENSG00000018699
Tetratricopeptide repeat domain 27
Low tissue specificity
Detected in all
TTC33
ENSSSCG00000034966
ENSG00000113638
Tetratricopeptide repeat domain 33
Low tissue specificity
Detected in all
TTC5
ENSSSCG00000002145
ENSG00000136319
Tetratricopeptide repeat domain 5
Low tissue specificity
Detected in all
TTC9C
ENSSSCG00000035472
ENSG00000162222
Tetratricopeptide repeat domain 9C
Low tissue specificity
Detected in all
TUBA1B
ENSSSCG00000000190
ENSG00000167552
Tubulin alpha-1B chain Detyrosinated tubulin alpha-1B chain
Tissue enhanced
Detected in all
brain:
214.6
lens:
298.3
TUBA1C
ENSSSCG00000000194
ENSG00000167553
Tubulin alpha 1c
Tissue enhanced
Detected in all
lens:
164.9
TUBA4A
ENSSSCG00000016216
ENSG00000127824
Tubulin alpha 4a
Tissue enhanced
Detected in many
brain:
63.2
skeletal muscle:
71.1
TUBB
ENSSSCG00000001379
ENSG00000196230
Tubulin beta chain
Tissue enhanced
Detected in all
lens:
164.9
TUBGCP4
ENSSSCG00000004708
ENSG00000137822
Tubulin gamma complex associated protein 4
Low tissue specificity
Detected in all
TUBGCP5
ENSSSCG00000027105
ENSG00000275835
Tubulin gamma complex associated protein 5
Low tissue specificity
Detected in all
TWF1
ENSSSCG00000000798
ENSG00000151239
Twinfilin actin binding protein 1
Tissue enhanced
Detected in all
lens:
64.3
TXNDC12
ENSSSCG00000003867
ENSG00000117862
Thioredoxin domain containing 12
Low tissue specificity
Detected in all
TXNDC15
ENSSSCG00000026106
ENSG00000113621
Thioredoxin domain-containing protein 15 precursor
Low tissue specificity
Detected in all
TXNDC17
ENSSSCG00000035820
ENSG00000129235
Thioredoxin domain containing 17
Low tissue specificity
Detected in all
TXNDC9
ENSSSCG00000008181
ENSG00000115514
Thioredoxin domain containing 9
Low tissue specificity
Detected in all
TXNL1
ENSSSCG00000004537
ENSG00000091164
Thioredoxin-like protein 1
Low tissue specificity
Detected in all
TXNL4A
ENSSSCG00000005777
ENSG00000141759
Thioredoxin like 4A
Tissue enhanced
Detected in all
lens:
44.2
TXNL4B
ENSSSCG00000025218
ENSG00000140830
Thioredoxin like 4B
Low tissue specificity
Detected in all
TXNRD1
ENSSSCG00000000843
ENSG00000198431
Thioredoxin reductase 1, cytoplasmic
Tissue enhanced
Detected in all
large intestine:
57.5
UBA5
ENSSSCG00000011631
ENSG00000081307
Ubiquitin like modifier activating enzyme 5
Low tissue specificity
Detected in all
UBA6
ENSSSCG00000008924
ENSG00000033178
Ubiquitin like modifier activating enzyme 6
Tissue enriched
Detected in all
pituitary gland:
66.5
UBE2A
ENSSSCG00000012621
ENSG00000077721
Ubiquitin conjugating enzyme E2 A
Low tissue specificity
Detected in all
UBE2B
ENSSSCG00000038953
ENSG00000119048
Ubiquitin-conjugating enzyme E2 B
Low tissue specificity
Detected in all
UBE2D2
ENSSSCG00000036711
ENSG00000131508
Ubiquitin conjugating enzyme E2 D2
Tissue enhanced
Detected in all
lens:
164.5
UBE2D3
ENSSSCG00000035622
Ubiquitin-conjugating enzyme E2 D2
Low tissue specificity
Detected in all
UBE2E2
ENSSSCG00000011209
ENSG00000182247
Ubiquitin conjugating enzyme E2 E2
Tissue enhanced
Detected in all
lens:
53.3
UBE2G1
ENSSSCG00000017878
ENSG00000132388
Ubiquitin conjugating enzyme E2 G1
Tissue enhanced
Detected in all
skeletal muscle:
64.4
UBE2H
ENSSSCG00000016564
ENSG00000186591
Ubiquitin conjugating enzyme E2 H
Low tissue specificity
Detected in all
UBE2I
ENSSSCG00000021560
ENSG00000103275
SUMO-conjugating enzyme UBC9
Low tissue specificity
Detected in all
UBE2K
ENSSSCG00000033602
ENSG00000078140
Ubiquitin-conjugating enzyme E2 K
Low tissue specificity
Detected in all
« prev
| Page
of 41 |
next »
MENU
