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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Other congenital disorders
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Subclass
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Biological process
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Keyword
Chromosome
1
2
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6
7
8
9
10
11
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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2003 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
TMEM126B
ENSSSCG00000014905
ENSG00000171204
Complex I assembly factor TMEM126B, mitochondrial
Low tissue specificity
Detected in all
TMEM128
ENSSSCG00000034122
ENSG00000132406
Transmembrane protein 128
Low tissue specificity
Detected in all
TMEM14A
ENSSSCG00000002622
ENSG00000096092
Transmembrane protein 14A
Low tissue specificity
Detected in all
TMEM160
ENSSSCG00000003109
ENSG00000130748
Transmembrane protein 160
Tissue enhanced
Detected in all
brain:
28.4
TMEM161B
ENSSSCG00000014148
ENSG00000164180
Transmembrane protein 161B
Low tissue specificity
Detected in all
TMEM167B
ENSSSCG00000037816
ENSG00000215717
Transmembrane protein 167B
Low tissue specificity
Detected in all
TMEM168
ENSSSCG00000016643
ENSG00000146802
Transmembrane protein 168
Low tissue specificity
Detected in all
TMEM177
ENSSSCG00000015742
ENSG00000144120
Transmembrane protein 177
Low tissue specificity
Detected in all
TMEM184C
ENSSSCG00000030044
ENSG00000164168
Transmembrane protein 184C
Tissue enhanced
Detected in all
lens:
58.1
TMEM185B
ENSSSCG00000038305
ENSG00000226479
Transmembrane protein 185B
Low tissue specificity
Detected in all
TMEM19
ENSSSCG00000000510
ENSG00000139291
Transmembrane protein 19
Low tissue specificity
Detected in all
TMEM192
ENSSSCG00000020868
ENSG00000170088
Transmembrane protein 192
Low tissue specificity
Detected in all
TMEM209
ENSSSCG00000016563
ENSG00000146842
Transmembrane protein 209
Low tissue specificity
Detected in all
TMEM220
ENSSSCG00000036454
ENSG00000187824
Transmembrane protein 220
Low tissue specificity
Detected in all
TMEM242
ENSSSCG00000004063
ENSG00000215712
Transmembrane protein 242
Low tissue specificity
Detected in all
TMEM246
ENSSSCG00000029687
ENSG00000165152
Transmembrane protein 246
Low tissue specificity
Detected in many
TMEM248
ENSSSCG00000007736
ENSG00000106609
Transmembrane protein 248
Low tissue specificity
Detected in all
TMEM263
ENSSSCG00000038968
ENSG00000151135
Transmembrane protein 263
Tissue enhanced
Detected in all
male glands:
54.9
TMEM267
ENSSSCG00000032979
ENSG00000151881
Transmembrane protein 267
Tissue enhanced
Detected in all
male glands:
20.3
TMEM30A
ENSSSCG00000033155
ENSG00000112697
Transmembrane protein 30A
Low tissue specificity
Detected in all
TMEM33
ENSSSCG00000037305
ENSG00000109133
Transmembrane protein 33
Tissue enhanced
Detected in all
choroid plexus:
44.5
TMEM41B
ENSSSCG00000014579
ENSG00000166471
Transmembrane protein 41B
Tissue enhanced
Detected in all
male glands:
43.2
TMEM50A
ENSSSCG00000024267
ENSG00000183726
Transmembrane protein 50A
Low tissue specificity
Detected in all
TMEM50B
ENSSSCG00000034624
ENSG00000142188
Transmembrane protein 50B
Low tissue specificity
Detected in all
TMEM59
ENSSSCG00000034261
ENSG00000116209
Transmembrane protein 59
Tissue enhanced
Detected in all
male glands:
89.1
TMEM60
ENSSSCG00000038541
ENSG00000135211
Transmembrane protein 60
Low tissue specificity
Detected in all
TMEM68
ENSSSCG00000006252
ENSG00000167904
Transmembrane protein 68
Low tissue specificity
Detected in all
TMEM69
ENSSSCG00000034035
ENSG00000159596
Transmembrane protein 69
Low tissue specificity
Detected in all
TMEM86A
ENSSSCG00000013360
ENSG00000151117
Transmembrane protein 86A
Low tissue specificity
Detected in all
TMLHE
ENSSSCG00000038442
ENSG00000185973
Trimethyllysine hydroxylase, epsilon
Low tissue specificity
Detected in all
TMSB4X
ENSSSCG00000012119
ENSG00000205542
Thymosin beta-4 Hematopoietic system regulatory peptide
Low tissue specificity
Detected in all
TMTC3
ENSSSCG00000000927
ENSG00000139324
Transmembrane and tetratricopeptide repeat containing 3
Low tissue specificity
Detected in all
TMX1
ENSSSCG00000038422
ENSG00000139921
Thioredoxin related transmembrane protein 1
Tissue enhanced
Detected in all
choroid plexus:
79.9
TMX2
ENSSSCG00000013176
ENSG00000213593
Thioredoxin related transmembrane protein 2
Low tissue specificity
Detected in all
TMX3
ENSSSCG00000004884
ENSG00000166479
Thioredoxin related transmembrane protein 3
Tissue enriched
Detected in all
lens:
60.1
TMX4
ENSSSCG00000021353
ENSG00000125827
Thioredoxin-related transmembrane protein 4 precursor
Low tissue specificity
Detected in all
TNKS
ENSSSCG00000015851
ENSG00000173273
Tankyrase
Low tissue specificity
Detected in all
TNKS2
ENSSSCG00000010465
ENSG00000107854
Tankyrase 2
Low tissue specificity
Detected in all
TNPO1
ENSSSCG00000027293
ENSG00000083312
Transportin 1
Low tissue specificity
Detected in all
TOMM20
ENSSSCG00000010158
ENSG00000173726
Translocase of outer mitochondrial membrane 20
Low tissue specificity
Detected in all
TOMM70
ENSSSCG00000011963
ENSG00000154174
Translocase of outer mitochondrial membrane 70
Tissue enhanced
Detected in all
brain:
62.1
TOP2B
ENSSSCG00000011213
ENSG00000077097
DNA topoisomerase 2-beta
Low tissue specificity
Detected in all
TOPBP1
ENSSSCG00000021966
ENSG00000163781
DNA topoisomerase II binding protein 1
Low tissue specificity
Detected in all
TOX2
ENSSSCG00000022202
ENSG00000124191
TOX high mobility group box family member 2
Group enriched
Detected in many
brain:
14.4
lens:
50.9
lymphoid tissue:
36.0
pituitary gland:
19.8
TOX4
ENSSSCG00000029203
ENSG00000092203
TOX high mobility group box family member 4
Low tissue specificity
Detected in all
TPMT
ENSSSCG00000001073
ENSG00000137364
Thiopurine S-methyltransferase
Tissue enhanced
Detected in many
pineal gland:
22.5
TPRG1L
ENSSSCG00000003359
ENSG00000158109
Tumor protein p63-regulated gene 1-like protein isoform 1
Low tissue specificity
Detected in all
TPRKB
ENSSSCG00000008297
ENSG00000144034
EKC/KEOPS complex subunit TPRKB
Low tissue specificity
Detected in all
TRA2B
ENSSSCG00000030225
ENSG00000136527
Transformer-2 protein homolog beta
Low tissue specificity
Detected in all
TRAPPC11
ENSSSCG00000015777
ENSG00000168538
Trafficking protein particle complex 11
Low tissue specificity
Detected in all
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