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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
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Other congenital disorders
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Subclass
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Biological process
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Disease
Keyword
Chromosome
1
2
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5
6
7
8
9
10
11
12
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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2003 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
TBC1D23
ENSSSCG00000030486
ENSG00000036054
TBC1 domain family member 23
Low tissue specificity
Detected in all
TBC1D7
ENSSSCG00000001053
ENSG00000145979
TBC1 domain family member 7
Low tissue specificity
Detected in all
TBCA
ENSSSCG00000014100
ENSG00000171530
Tubulin folding cofactor A
Low tissue specificity
Detected in all
TBCB
ENSSSCG00000002926
ENSG00000105254
Tubulin-folding cofactor B
Low tissue specificity
Detected in all
TBCK
ENSSSCG00000021784
ENSG00000145348
TBC1 domain containing kinase
Low tissue specificity
Detected in all
TBK1
ENSSSCG00000031103
ENSG00000183735
Serine/threonine-protein kinase TBK1
Low tissue specificity
Detected in all
TBL1XR1
ENSSSCG00000011760
ENSG00000177565
Transducin beta like 1 X-linked receptor 1
Low tissue specificity
Detected in all
TBPL1
ENSSSCG00000022387
ENSG00000028839
TATA-box binding protein like 1
Low tissue specificity
Detected in all
TCAIM
ENSSSCG00000031304
ENSG00000179152
T cell activation inhibitor, mitochondrial
Low tissue specificity
Detected in all
TCEA1
ENSSSCG00000006261
ENSG00000187735
Transcription elongation factor A protein 1
Low tissue specificity
Detected in all
TCP1
ENSSSCG00000004048
ENSG00000120438
T-complex protein 1 subunit alpha
Low tissue specificity
Detected in all
TCP11L2
ENSSSCG00000024881
ENSG00000166046
T-complex 11 like 2
Low tissue specificity
Detected in all
TDP2
ENSSSCG00000001092
ENSG00000111802
Tyrosyl-DNA phosphodiesterase 2
Low tissue specificity
Detected in all
TECR
ENSSSCG00000031299
ENSG00000099797
Trans-2,3-enoyl-CoA reductase
Low tissue specificity
Detected in all
TECTA
ENSSSCG00000023728
ENSG00000109927
Tectorin alpha
Low tissue specificity
Detected in all
TERF1
ENSSSCG00000006184
ENSG00000147601
Telomeric repeat binding factor 1
Low tissue specificity
Detected in all
TERF2
ENSSSCG00000002762
ENSG00000132604
Telomeric repeat binding factor 2
Low tissue specificity
Detected in all
TET1
ENSSSCG00000010241
ENSG00000138336
Methylcytosine dioxygenase TET1
Low tissue specificity
Detected in all
TFAM
ENSSSCG00000040185
ENSG00000108064
Transcription factor A, mitochondrial
Low tissue specificity
Detected in all
TFB1M
ENSSSCG00000024361
ENSG00000029639
Dimethyladenosine transferase 1, mitochondrial
Low tissue specificity
Detected in all
TFG
ENSSSCG00000011961
ENSG00000114354
TRK-fused gene
Low tissue specificity
Detected in all
THAP1
ENSSSCG00000039969
ENSG00000131931
THAP domain containing 1
Low tissue specificity
Detected in all
THAP2
ENSSSCG00000021270
ENSG00000173451
THAP domain containing 2
Low tissue specificity
Detected in all
THAP5
ENSSSCG00000038158
ENSG00000177683
THAP domain containing 5
Low tissue specificity
Detected in all
THAP6
ENSSSCG00000029348
ENSG00000174796
THAP domain containing 6
Tissue enhanced
Detected in all
lens:
36.5
THOC7
ENSSSCG00000011491
ENSG00000163634
THO complex 7
Low tissue specificity
Detected in all
TIGD2
ENSSSCG00000032541
ENSG00000180346
Tigger transposable element derived 2
Low tissue specificity
Detected in all
TIMM10
ENSSSCG00000039659
ENSG00000134809
Translocase of inner mitochondrial membrane 10
Low tissue specificity
Detected in all
TIMM21
ENSSSCG00000032494
ENSG00000075336
Translocase of inner mitochondrial membrane 21
Low tissue specificity
Detected in all
TIMM8A
ENSSSCG00000012494
ENSG00000126953
Translocase of inner mitochondrial membrane 8A
Low tissue specificity
Detected in all
TIMM9
ENSSSCG00000027270
ENSG00000100575
Translocase of inner mitochondrial membrane 9
Low tissue specificity
Detected in all
TIMMDC1
ENSSSCG00000037639
ENSG00000113845
Translocase of inner mitochondrial membrane domain containing 1
Low tissue specificity
Detected in all
TIPARP
ENSSSCG00000027646
ENSG00000163659
TCDD inducible poly(ADP-ribose) polymerase
Low tissue specificity
Detected in all
TIPRL
ENSSSCG00000006301
ENSG00000143155
TOR signaling pathway regulator
Low tissue specificity
Detected in all
TLE4
ENSSSCG00000005288
ENSG00000106829
Transducin like enhancer of split 4
Low tissue specificity
Detected in all
TLK1
ENSSSCG00000015944
ENSG00000198586
Tousled like kinase 1
Low tissue specificity
Detected in all
TM2D1
ENSSSCG00000038861
ENSG00000162604
TM2 domain containing 1
Low tissue specificity
Detected in all
TM2D2
ENSSSCG00000028592
ENSG00000169490
TM2 domain-containing protein 2 precursor
Low tissue specificity
Detected in all
TM2D3
ENSSSCG00000005782
ENSG00000184277
TM2 domain containing 3
Low tissue specificity
Detected in all
TM7SF3
ENSSSCG00000000553
ENSG00000064115
Transmembrane 7 superfamily member 3
Low tissue specificity
Detected in all
TM9SF2
ENSSSCG00000031808
ENSG00000125304
Transmembrane 9 superfamily member 2
Tissue enhanced
Detected in all
male glands:
90.5
TM9SF3
ENSSSCG00000010508
ENSG00000077147
Transmembrane 9 superfamily member 3
Tissue enriched
Detected in all
male glands:
158.2
TMA16
ENSSSCG00000008890
ENSG00000198498
Translation machinery associated 16 homolog
Low tissue specificity
Detected in all
TMA7
ENSSSCG00000011351
ENSG00000232112
Translation machinery associated 7 homolog
Low tissue specificity
Detected in all
TMCO1
ENSSSCG00000037314
ENSG00000143183
Calcium load-activated calcium channel
Low tissue specificity
Detected in all
TMED10
ENSSSCG00000035684
ENSG00000170348
Transmembrane p24 trafficking protein 10
Low tissue specificity
Detected in all
TMED5
ENSSSCG00000040439
ENSG00000117500
Transmembrane emp24 domain-containing protein 5 precursor
Low tissue specificity
Detected in all
TMED7
ENSSSCG00000038156
ENSG00000134970
Transmembrane emp24 domain-containing protein 7 precursor
Low tissue specificity
Detected in all
TMED8
ENSSSCG00000036028
ENSG00000100580
Transmembrane p24 trafficking protein family member 8
Low tissue specificity
Detected in all
TMEM106B
ENSSSCG00000032740
ENSG00000106460
Transmembrane protein 106B
Low tissue specificity
Detected in all
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