We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
2003 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 41 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
SMARCAD1
ENSSSCG00000009193
ENSG00000163104
SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
Low tissue specificity
Detected in all
SMARCB1
ENSSSCG00000010070
ENSG00000099956
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
Low tissue specificity
Detected in all
SMIM12
ENSSSCG00000031642
ENSG00000163866
Small integral membrane protein 12
Low tissue specificity
Detected in all
SMIM14
ENSSSCG00000021793
ENSG00000163683
Small integral membrane protein 14
Tissue enhanced
Detected in all
male glands:
106.1
SMIM15
ENSSSCG00000033814
ENSG00000188725
Small integral membrane protein 15
Low tissue specificity
Detected in all
SMIM26
ENSSSCG00000025589
ENSG00000232388
Small integral membrane protein 26
Low tissue specificity
Detected in all
SMIM7
ENSSSCG00000013863
ENSG00000214046,ENSG00000268790
Small integral membrane protein 7
Tissue enriched
Detected in all
lens:
152.5
SMU1
ENSSSCG00000010999
ENSG00000122692
WD40 repeat-containing protein SMU1
Low tissue specificity
Detected in all
SNAP47
ENSSSCG00000013984
ENSG00000143740
Synaptosome associated protein 47
Low tissue specificity
Detected in all
SNAPC1
ENSSSCG00000005097
ENSG00000023608
Small nuclear RNA activating complex polypeptide 1
Low tissue specificity
Detected in all
SNAPC2
ENSSSCG00000013589
ENSG00000104976
Small nuclear RNA activating complex polypeptide 2
Low tissue specificity
Detected in all
SNAPIN
ENSSSCG00000034159
ENSG00000143553
SNARE-associated protein Snapin
Low tissue specificity
Detected in all
SNIP1
ENSSSCG00000029991
ENSG00000163877
Smad nuclear interacting protein 1
Low tissue specificity
Detected in all
SNRNP25
ENSSSCG00000007962
ENSG00000161981
Small nuclear ribonucleoprotein U11/U12 subunit 25
Low tissue specificity
Detected in all
SNRNP27
ENSSSCG00000025674
ENSG00000124380
Small nuclear ribonucleoprotein U4/U6.U5 subunit 27
Low tissue specificity
Detected in all
SNRNP35
ENSSSCG00000022212
ENSG00000184209
Small nuclear ribonucleoprotein U11/U12 subunit 35
Low tissue specificity
Detected in all
SNRNP40
ENSSSCG00000003596
ENSG00000060688
Small nuclear ribonucleoprotein U5 subunit 40
Low tissue specificity
Detected in all
SNRPB2
ENSSSCG00000037602
ENSG00000125870
U2 small nuclear ribonucleoprotein B''
Low tissue specificity
Detected in all
SNRPC
ENSSSCG00000001531
ENSG00000124562
U1 small nuclear ribonucleoprotein C
Tissue enhanced
Detected in all
testis:
91.4
SNRPD1
ENSSSCG00000003701
ENSG00000167088
Small nuclear ribonucleoprotein D1 polypeptide
Low tissue specificity
Detected in all
SNRPD3
ENSSSCG00000010058
ENSG00000100028
Small nuclear ribonucleoprotein Sm D3
Low tissue specificity
Detected in all
SNRPE
ENSSSCG00000023562
ENSG00000182004
Small nuclear ribonucleoprotein E
Low tissue specificity
Detected in all
SNRPF
ENSSSCG00000000895
ENSG00000139343
Small nuclear ribonucleoprotein F
Low tissue specificity
Detected in all
SNU13
ENSSSCG00000000058
NHP2-like protein 1
Tissue enhanced
Detected in all
brain:
79.2
SNX12
ENSSSCG00000012400
ENSG00000147164
Sorting nexin 12
Low tissue specificity
Detected in all
SNX13
ENSSSCG00000024761
ENSG00000071189
Sorting nexin 13
Low tissue specificity
Detected in all
SNX14
ENSSSCG00000004293
ENSG00000135317
Sorting nexin 14
Low tissue specificity
Detected in all
SNX16
ENSSSCG00000006151
ENSG00000104497
Sorting nexin 16
Low tissue specificity
Detected in all
SNX27
ENSSSCG00000006619
ENSG00000143376
Sorting nexin family member 27
Low tissue specificity
Detected in all
SNX3
ENSSSCG00000004385
ENSG00000112335
Sorting nexin 3
Low tissue specificity
Detected in all
SNX4
ENSSSCG00000036828
ENSG00000114520
Sorting nexin 4
Low tissue specificity
Detected in all
SOCS4
ENSSSCG00000032332
ENSG00000180008
Suppressor of cytokine signaling 4
Low tissue specificity
Detected in all
SOD1
ENSSSCG00000021355
ENSG00000142168
Superoxide dismutase
Low tissue specificity
Detected in all
SPAST
ENSSSCG00000008517
ENSG00000021574
Spastin
Low tissue specificity
Detected in all
SPATA1
ENSSSCG00000029882
ENSG00000122432
Spermatogenesis associated 1
Tissue enhanced
Detected in all
smooth muscle:
29.9
SPCS1
ENSSSCG00000011447
ENSG00000114902
Signal peptidase complex subunit 1
Tissue enhanced
Detected in all
testis:
75.9
SPCS3
ENSSSCG00000015769
ENSG00000129128
Signal peptidase complex subunit 3
Low tissue specificity
Detected in all
SPG11
ENSSSCG00000004684
ENSG00000104133
SPG11, spatacsin vesicle trafficking associated
Low tissue specificity
Detected in all
SPG21
ENSSSCG00000004544
ENSG00000090487
Maspardin
Tissue enhanced
Detected in all
male glands:
64.5
SPIN1
ENSSSCG00000035901
ENSG00000106723
Spindlin-1
Low tissue specificity
Detected in all
SPOP
ENSSSCG00000020796
ENSG00000121067
Speckle type BTB/POZ protein
Low tissue specificity
Detected in all
SPOPL
ENSSSCG00000032198
ENSG00000144228
Speckle type BTB/POZ protein like
Low tissue specificity
Detected in all
SPPL2A
ENSSSCG00000004635
ENSG00000138600
Signal peptide peptidase like 2A
Low tissue specificity
Detected in all
SPPL3
ENSSSCG00000009917
ENSG00000157837
Signal peptide peptidase like 3
Low tissue specificity
Detected in all
SPRYD7
ENSSSCG00000009390
ENSG00000123178
SPRY domain-containing protein 7
Low tissue specificity
Detected in all
SPTLC1
ENSSSCG00000009594
ENSG00000090054
Serine palmitoyltransferase long chain base subunit 1
Low tissue specificity
Detected in all
SPTSSA
ENSSSCG00000039421
ENSG00000165389
Serine palmitoyltransferase small subunit A
Low tissue specificity
Detected in all
SRA1
ENSSSCG00000014365
ENSG00000213523
Steroid receptor RNA activator 1
Low tissue specificity
Detected in all
SRFBP1
ENSSSCG00000022656
ENSG00000151304
Serum response factor-binding protein 1
Low tissue specificity
Detected in all
SRI
ENSSSCG00000015298
ENSG00000075142
Sorcin isoform 2
Tissue enriched
Detected in all
lens:
129.2
« prev
| Page
of 41 |
next »
MENU
