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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
Cardiovascular diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
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18
MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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2003 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
NKAPD1
ENSSSCG00000015044
ENSG00000150776
NKAP domain containing 1
Low tissue specificity
Detected in all
NKRF
ENSSSCG00000012620
ENSG00000186416
NFKB repressing factor
Low tissue specificity
Detected in all
NLN
ENSSSCG00000016778
ENSG00000123213
Neurolysin, mitochondrial
Tissue enhanced
Detected in all
liver:
36.2
NMD3
ENSSSCG00000022952
ENSG00000169251
NMD3 ribosome export adaptor
Low tissue specificity
Detected in all
NMT1
ENSSSCG00000017339
ENSG00000136448
N-myristoyltransferase 1
Tissue enhanced
Detected in all
lens:
82.6
NOL11
ENSSSCG00000017275
ENSG00000130935
Nucleolar protein 11
Low tissue specificity
Detected in all
NOL8
ENSSSCG00000008069
ENSG00000198000
Nucleolar protein 8
Low tissue specificity
Detected in all
NOLC1
ENSSSCG00000010576
ENSG00000166197
Nucleolar and coiled-body phosphoprotein 1
Low tissue specificity
Detected in all
NOP10
ENSSSCG00000036960
ENSG00000182117
NOP10 ribonucleoprotein
Low tissue specificity
Detected in all
NOP58
ENSSSCG00000022225
ENSG00000055044
NOP58 ribonucleoprotein
Low tissue specificity
Detected in all
NPAT
ENSSSCG00000026959
ENSG00000149308
Nuclear protein, coactivator of histone transcription
Low tissue specificity
Detected in all
NPEPPS
ENSSSCG00000017513
ENSG00000141279
Aminopeptidase puromycin sensitive
Low tissue specificity
Detected in all
NPTN
ENSSSCG00000001918
ENSG00000156642
Neuroplastin
Low tissue specificity
Detected in all
NR1D2
ENSSSCG00000027017
ENSG00000174738
Nuclear receptor subfamily 1 group D member 2
Low tissue specificity
Detected in all
NR2C2AP
ENSSSCG00000023658
ENSG00000184162
Nuclear receptor 2C2 associated protein
Low tissue specificity
Detected in all
NRDC
ENSSSCG00000003870
ENSG00000078618
Nardilysin convertase
Low tissue specificity
Detected in all
NRIP1
ENSSSCG00000021038
ENSG00000180530
Nuclear receptor interacting protein 1
Tissue enhanced
Detected in all
cervix:
95.1
NSUN3
ENSSSCG00000027432
ENSG00000178694
NOP2/Sun RNA methyltransferase family member 3
Tissue enhanced
Detected in all
male glands:
24.8
NT5DC1
ENSSSCG00000004435
ENSG00000178425
5'-nucleotidase domain containing 1
Tissue enhanced
Detected in all
large intestine:
34.0
pineal gland:
29.9
NTPCR
ENSSSCG00000010166
ENSG00000135778
Nucleoside-triphosphatase, cancer-related
Tissue enhanced
Detected in all
lens:
46.7
NUBPL
ENSSSCG00000001968
ENSG00000151413
Nucleotide binding protein like
Low tissue specificity
Detected in all
NUCKS1
ENSSSCG00000022398
ENSG00000069275
Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1
Low tissue specificity
Detected in all
NUDCD1
ENSSSCG00000006029
ENSG00000120526
NudC domain containing 1
Low tissue specificity
Detected in all
NUDCD2
ENSSSCG00000032806
ENSG00000170584
NudC domain containing 2
Low tissue specificity
Detected in all
NUDT12
ENSSSCG00000014187
ENSG00000112874
Nudix hydrolase 12
Low tissue specificity
Detected in all
NUDT21
ENSSSCG00000034521
ENSG00000167005
Cleavage and polyadenylation specificity factor subunit 5
Low tissue specificity
Detected in all
NUDT5
ENSSSCG00000011113
ENSG00000165609
Nudix hydrolase 5
Low tissue specificity
Detected in all
NUP133
ENSSSCG00000010189
ENSG00000069248
Nucleoporin 133
Low tissue specificity
Detected in all
NUP155
ENSSSCG00000016845
ENSG00000113569
Nucleoporin 155
Tissue enhanced
Detected in all
testis:
45.0
NUP35
ENSSSCG00000028949
ENSG00000163002
Nucleoporin 35
Low tissue specificity
Detected in all
NUPL2
ENSSSCG00000023793
ENSG00000136243
Nucleoporin like 2
Low tissue specificity
Detected in all
NUS1
ENSSSCG00000020885
ENSG00000153989
NUS1 dehydrodolichyl diphosphate synthase subunit
Low tissue specificity
Detected in all
NUSAP1
ENSSSCG00000035544
ENSG00000137804
Nucleolar and spindle associated protein 1
Low tissue specificity
Detected in all
OARD1
ENSSSCG00000023366
ENSG00000124596
O-acyl-ADP-ribose deacylase 1
Low tissue specificity
Detected in all
OCIAD1
ENSSSCG00000008828
ENSG00000109180
OCIA domain containing 1
Low tissue specificity
Detected in all
OCRL
ENSSSCG00000012650
ENSG00000122126
OCRL, inositol polyphosphate-5-phosphatase
Tissue enriched
Detected in all
ovary:
87.6
ODR4
ENSSSCG00000015577
ENSG00000157181
Odr-4 GPCR localization factor homolog
Low tissue specificity
Detected in all
OGFOD1
ENSSSCG00000025953
ENSG00000087263
Prolyl 3-hydroxylase OGFOD1
Low tissue specificity
Detected in all
OGFRL1
ENSSSCG00000004279
ENSG00000119900
Opioid growth factor receptor like 1
Low tissue specificity
Detected in all
OLA1
ENSSSCG00000015963
ENSG00000138430
Obg like ATPase 1
Tissue enhanced
Detected in all
lens:
75.6
OPA1
ENSSSCG00000011822
ENSG00000198836
OPA1, mitochondrial dynamin like GTPase
Low tissue specificity
Detected in all
ORC3
ENSSSCG00000004306
ENSG00000135336
Origin recognition complex subunit 3
Low tissue specificity
Detected in all
ORC4
ENSSSCG00000015668
ENSG00000115947
Origin recognition complex subunit 4
Low tissue specificity
Detected in all
ORC5
ENSSSCG00000015427
ENSG00000164815
Origin recognition complex subunit 5
Low tissue specificity
Detected in all
OSBPL8
ENSSSCG00000027503
ENSG00000091039
Oxysterol binding protein like 8
Low tissue specificity
Detected in all
OSER1
ENSSSCG00000022714
ENSG00000132823
Oxidative stress responsive serine rich 1
Low tissue specificity
Detected in all
OSGIN2
ENSSSCG00000021184
ENSG00000164823
Oxidative stress induced growth inhibitor family member 2
Tissue enriched
Detected in all
lens:
91.5
OSTC
ENSSSCG00000009145
ENSG00000198856
Oligosaccharyltransferase complex non-catalytic subunit
Tissue enhanced
Detected in all
male glands:
56.6
OSTM1
ENSSSCG00000004383
ENSG00000081087
Osteopetrosis associated transmembrane protein 1
Low tissue specificity
Detected in all
OTUD6B
ENSSSCG00000006120
ENSG00000155100
OTU domain containing 6B
Low tissue specificity
Detected in all
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