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Gene name
Human disease related genes
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Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
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Gene name
Class
Cancers
Cardiovascular diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
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18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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2003 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000039778
Low tissue specificity
Detected in all
na
ENSSSCG00000039854
ENSG00000152078
Tissue enriched
Detected in many
ovary:
138.1
na
ENSSSCG00000039870
Low tissue specificity
Detected in all
na
ENSSSCG00000040056
ENSG00000173598,ENSG00000177144
Tissue enhanced
Detected in all
lens:
126.0
na
ENSSSCG00000040060
ENSG00000100823
DNA-(apurinic or apyrimidinic site) lyase
Low tissue specificity
Detected in all
na
ENSSSCG00000040187
Low tissue specificity
Detected in all
na
ENSSSCG00000040203
Tissue enhanced
Detected in all
lens:
37.6
na
ENSSSCG00000040220
Low tissue specificity
Detected in all
na
ENSSSCG00000040294
Tissue enhanced
Detected in all
brain:
29.3
na
ENSSSCG00000040305
Low tissue specificity
Detected in all
na
ENSSSCG00000040495
Low tissue specificity
Detected in all
na
ENSSSCG00000040528
ENSG00000113312
Low tissue specificity
Detected in all
na
ENSSSCG00000040577
ENSG00000221821
Low tissue specificity
Detected in all
na
ENSSSCG00000040688
Low tissue specificity
Detected in all
na
ENSSSCG00000040693
Low tissue specificity
Detected in all
na
ENSSSCG00000040782
ENSG00000266472
Low tissue specificity
Detected in all
na
ENSSSCG00000040801
Low tissue specificity
Detected in all
na
ENSSSCG00000040889
ENSG00000134248
Ragulator complex protein LAMTOR5
Low tissue specificity
Detected in all
na
ENSSSCG00000040903
Tissue enhanced
Detected in many
brain:
12.6
heart:
9.7
synovial tissue:
12.3
na
ENSSSCG00000040984
ENSG00000137168
Low tissue specificity
Detected in all
NAA15
ENSSSCG00000009061
ENSG00000164134
N(alpha)-acetyltransferase 15, NatA auxiliary subunit
Low tissue specificity
Detected in all
NAA30
ENSSSCG00000031332
ENSG00000139977
N(alpha)-acetyltransferase 30, NatC catalytic subunit
Low tissue specificity
Detected in all
NAA50
ENSSSCG00000011917
ENSG00000121579
N-alpha-acetyltransferase 50
Low tissue specificity
Detected in all
NAB1
ENSSSCG00000029547
ENSG00000138386
NGFI-A binding protein 1
Low tissue specificity
Detected in all
NAF1
ENSSSCG00000008887
ENSG00000145414
Nuclear assembly factor 1 ribonucleoprotein
Low tissue specificity
Detected in all
NANOS1
ENSSSCG00000040025
ENSG00000188613
Nanos C2HC-type zinc finger 1
Tissue enhanced
Detected in many
male glands:
21.9
synovial tissue:
16.4
NAPA
ENSSSCG00000003120
ENSG00000105402
Alpha-soluble NSF attachment protein
Low tissue specificity
Detected in all
NARS
ENSSSCG00000004542
ENSG00000134440
Asparaginyl-tRNA synthetase
Low tissue specificity
Detected in all
NBN
ENSSSCG00000006127
ENSG00000104320
Nibrin
Low tissue specificity
Detected in all
NCBP1
ENSSSCG00000005366
ENSG00000136937
Nuclear cap binding protein subunit 1
Low tissue specificity
Detected in all
NCBP2
ENSSSCG00000027323
ENSG00000114503
Nuclear cap binding protein subunit 2
Low tissue specificity
Detected in all
NCK1
ENSSSCG00000025701
ENSG00000158092
Cytoplasmic protein NCK1
Low tissue specificity
Detected in all
NCKAP1
ENSSSCG00000016019
ENSG00000061676
NCK associated protein 1
Tissue enhanced
Detected in all
brain:
64.9
NDC1
ENSSSCG00000028748
ENSG00000058804
NDC1 transmembrane nucleoporin
Low tissue specificity
Detected in all
NDUFAF1
ENSSSCG00000004748
ENSG00000137806
NADH:ubiquinone oxidoreductase complex assembly factor 1
Low tissue specificity
Detected in all
NDUFAF2
ENSSSCG00000027763
ENSG00000164182
NADH:ubiquinone oxidoreductase complex assembly factor 2
Low tissue specificity
Detected in all
NDUFAF5
ENSSSCG00000007076
ENSG00000101247
NADH:ubiquinone oxidoreductase complex assembly factor 5
Tissue enhanced
Detected in all
testis:
22.7
NDUFAF6
ENSSSCG00000006093
ENSG00000156170
NADH:ubiquinone oxidoreductase complex assembly factor 6
Low tissue specificity
Detected in all
NDUFAF7
ENSSSCG00000008494
ENSG00000003509
NADH:ubiquinone oxidoreductase complex assembly factor 7
Low tissue specificity
Detected in all
NDUFC1
ENSSSCG00000037953
ENSG00000109390
NADH dehydrogenase
Low tissue specificity
Detected in all
NECAP1
ENSSSCG00000025179
ENSG00000089818
NECAP endocytosis associated 1
Tissue enhanced
Detected in all
pituitary gland:
46.3
NEDD8
ENSSSCG00000031938
ENSG00000129559
Neural precursor cell expressed, developmentally down-regulated 8
Low tissue specificity
Detected in all
NEMF
ENSSSCG00000005011
ENSG00000165525
Nuclear export mediator factor
Low tissue specificity
Detected in all
NF1
ENSSSCG00000017748
ENSG00000196712
Neurofibromin 1
Low tissue specificity
Detected in all
NFYB
ENSSSCG00000000844
ENSG00000120837
Nuclear transcription factor Y subunit beta
Low tissue specificity
Detected in all
NIFK
ENSSSCG00000015730
ENSG00000155438
MKI67 FHA domain-interacting nucleolar phosphoprotein
Low tissue specificity
Detected in all
NIP7
ENSSSCG00000033741
ENSG00000132603
60S ribosome subunit biogenesis protein NIP7 homolog
Tissue enhanced
Detected in all
lens:
31.6
NIPA2
ENSSSCG00000036898
ENSG00000140157
Non imprinted in Prader-Willi/Angelman syndrome 2
Low tissue specificity
Detected in all
NIPSNAP3B
ENSSSCG00000005424
ENSG00000165028
Nipsnap homolog 3B
Low tissue specificity
Detected in all
NKAP
ENSSSCG00000012613
ENSG00000101882
NF-kappa-B-activating protein
Low tissue specificity
Detected in all
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