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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
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Other congenital disorders
Other diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
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5
6
7
8
9
10
11
12
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14
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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2003 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
MRE11
ENSSSCG00000014955
ENSG00000020922
MRE11 homolog, double strand break repair nuclease
Low tissue specificity
Detected in all
MRPL13
ENSSSCG00000005996
ENSG00000172172
39S ribosomal protein L13, mitochondrial
Low tissue specificity
Detected in all
MRPL3
ENSSSCG00000011179
ENSG00000114686
Mitochondrial ribosomal protein L3
Low tissue specificity
Detected in all
MRPL34
ENSSSCG00000039295
ENSG00000130312
Mitochondrial ribosomal protein L34
Low tissue specificity
Detected in all
MRPL35
ENSSSCG00000021746
ENSG00000132313
Mitochondrial ribosomal protein L35
Low tissue specificity
Detected in all
MRPL40
ENSSSCG00000034014
ENSG00000185608
39S ribosomal protein L40, mitochondrial isoform 1
Low tissue specificity
Detected in all
MRPL46
ENSSSCG00000005105
ENSG00000259494
Mitochondrial ribosomal protein L46
Low tissue specificity
Detected in all
MRPL47
ENSSSCG00000011763
ENSG00000136522
Mitochondrial ribosomal protein L47
Low tissue specificity
Detected in all
MRPS10
ENSSSCG00000001638
ENSG00000048544
Mitochondrial ribosomal protein S10
Low tissue specificity
Detected in all
MRPS14
ENSSSCG00000031435
ENSG00000120333
Mitochondrial ribosomal protein S14
Low tissue specificity
Detected in all
MRPS18C
ENSSSCG00000038042
ENSG00000163319
Mitochondrial ribosomal protein S18C
Low tissue specificity
Detected in all
MRPS22
ENSSSCG00000035771
ENSG00000175110
Mitochondrial ribosomal protein S22
Low tissue specificity
Detected in all
MRPS23
ENSSSCG00000035193
ENSG00000181610
28S ribosomal protein S23, mitochondrial
Low tissue specificity
Detected in all
MRPS30
ENSSSCG00000032275
ENSG00000112996
Mitochondrial ribosomal protein S30
Low tissue specificity
Detected in all
MRPS31
ENSSSCG00000009372
ENSG00000102738
Mitochondrial ribosomal protein S31
Low tissue specificity
Detected in all
MRPS35
ENSSSCG00000000547
ENSG00000061794
28S ribosomal protein S35, mitochondrial
Low tissue specificity
Detected in all
MSL3
ENSSSCG00000012114
ENSG00000005302
Male-specific lethal 3 homolog isoform 1
Low tissue specificity
Detected in all
MSMO1
ENSSSCG00000008857
ENSG00000052802
Methylsterol monooxygenase 1
Tissue enhanced
Detected in all
brain:
67.2
liver:
52.2
ovary:
61.3
MTCH1
ENSSSCG00000001571
ENSG00000137409
Mitochondrial carrier homolog 1 isoform 1
Tissue enhanced
Detected in all
male glands:
141.8
MTERF1
ENSSSCG00000015309
ENSG00000127989
Mitochondrial transcription termination factor 1
Low tissue specificity
Detected in all
MTFMT
ENSSSCG00000004543
ENSG00000103707
Methionyl-tRNA formyltransferase, mitochondrial
Low tissue specificity
Detected in all
MTFR1
ENSSSCG00000006219
ENSG00000066855
Mitochondrial fission regulator 1
Tissue enhanced
Detected in all
testis:
48.2
MTHFD2L
ENSSSCG00000008961
ENSG00000163738
Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like
Low tissue specificity
Detected in many
MTMR10
ENSSSCG00000004844
ENSG00000166912
Myotubularin related protein 10
Low tissue specificity
Detected in all
MTMR2
ENSSSCG00000014970
ENSG00000087053
Myotubularin related protein 2
Low tissue specificity
Detected in all
MTMR9
ENSSSCG00000035133
ENSG00000104643
Myotubularin related protein 9
Low tissue specificity
Detected in all
MTO1
ENSSSCG00000004487
ENSG00000135297
Mitochondrial tRNA translation optimization 1
Low tissue specificity
Detected in all
MTPN
ENSSSCG00000039290
ENSG00000105887
Myotrophin
Tissue enhanced
Detected in all
lens:
94.6
MTREX
ENSSSCG00000016911
ENSG00000039123
Mtr4 exosome RNA helicase
Low tissue specificity
Detected in all
MTRF1L
ENSSSCG00000004076
ENSG00000112031
Peptide chain release factor 1-like, mitochondrial
Low tissue specificity
Detected in all
MTX2
ENSSSCG00000022222
ENSG00000128654
Metaxin-2
Low tissue specificity
Detected in all
MTX3
ENSSSCG00000014116
ENSG00000177034
Metaxin 3
Low tissue specificity
Detected in all
MXI1
ENSSSCG00000022128
ENSG00000119950
MAX interactor 1, dimerization protein
Low tissue specificity
Detected in all
MYNN
ENSSSCG00000026829
ENSG00000085274
Myoneurin
Low tissue specificity
Detected in all
MYO5A
ENSSSCG00000004620
ENSG00000197535
CAMP-regulated phosphoprotein 19
Tissue enhanced
Detected in all
brain:
69.8
MZT1
ENSSSCG00000040073
ENSG00000204899
Mitotic spindle organizing protein 1
Low tissue specificity
Detected in all
na
ENSSSCG00000000097
ENSG00000100216
Low tissue specificity
Detected in all
na
ENSSSCG00000000377
Low tissue specificity
Detected in all
na
ENSSSCG00000000394
ENSG00000144785,ENSG00000257727
Protein canopy homolog 2 precursor
Tissue enhanced
Detected in all
male glands:
100.1
na
ENSSSCG00000000473
ENSG00000155957
Tissue enhanced
Detected in all
male glands:
49.8
na
ENSSSCG00000000522
Nucleosome assembly protein 1-like 1
Low tissue specificity
Detected in all
na
ENSSSCG00000000635
ENSG00000111196
Low tissue specificity
Detected in all
na
ENSSSCG00000000908
Tissue enhanced
Detected in all
testis:
130.4
na
ENSSSCG00000001038
Low tissue specificity
Detected in all
na
ENSSSCG00000001505
ENSG00000204220
Prefoldin subunit 6
Low tissue specificity
Detected in all
na
ENSSSCG00000001779
ENSG00000086666
Low tissue specificity
Detected in all
na
ENSSSCG00000001859
ENSG00000183208
Low tissue specificity
Detected in all
na
ENSSSCG00000001934
Low tissue specificity
Detected in all
na
ENSSSCG00000002446
ENSG00000123594
Ataxin-3
Low tissue specificity
Detected in all
na
ENSSSCG00000002703
ENSG00000166848
Low tissue specificity
Detected in all
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